ZMP
nar
Ensembl ID:
ZFIN ID:
Description:
cleavage and polyadenylation specificity factor subunit 4 [Source:RefSeq peptide;Acc:NP_571084]
Human Orthologue:
CPSF4
Human Description:
cleavage and polyadenylation specific factor 4, 30kDa [Source:HGNC Symbol;Acc:2327]
Mouse Orthologue:
Cpsf4
Mouse Description:
cleavage and polyadenylation specific factor 4 Gene [Source:MGI Symbol;Acc:MGI:1861602]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20096 | Essential Splice Site | Available for shipment | Available now |
| sa760 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa20096
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017304 | Essential Splice Site | 102 | 271 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 3 (position 40285003)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40148363 |
| GRCz11 | 3 | 40290221 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGAGTACGACATGACTAAGATGCCCGAGTGTTATTTCTACTCTAAATTTG[G/A]TTAGTATTGTAATATCCATCCATCCATCTATATTTTGTTTGTTAATAATG
Long Flanking Sequence:
GAATTAATCGCCACTGTCGATCACATCAAGTTTGATCTTGAAATCGCTGTTGAACAACAATTAGGCGCTCAGCCGTTGCCATTTCCAGGAATGGATAGTAAGTTCATGGATGGATATTTGCTTATGTTCGTCTATTTTTCAAAACATAAGACTAACTAAGCACAGAAAACAGTTTAATAATGATAAATATTCTCTGTTTCCAGAATCTGGCGCTGCTGTATGCGAGTACTTCATGAGAGCTGCTTGTATGAAAGGTGAGTTGTGCATTTCAGAAGCTTGTTGAAGTGTTCATGTGTAAATCAGATTATTATTGACCCTCAATGACTCAACTTTCCCGTTTTTGACAGGTGGAATGTGTCCCTTCAGACACATCAGTGGAGAAAAGACTGTGGTGTGCAAGCATTGGCTTAGAGGCTTATGCAAGAAAGGAGATCAATGTGAATTTTTACACGAGTACGACATGACTAAGATGCCCGAGTGTTATTTCTACTCTAAATTTG[G/A]TTAGTATTGTAATATCCATCCATCCATCTATATTTTGTTTGTTAATAATGCTAATACAATGTTTGTATTGTTTTGCAGGGGAGTGCAGTAATAAAGAGTGTCCATTCTTGCACATTGACCCAGAATCTAAGATTAAAGATTGCCCGTGGTATGATAGGGGTTTTTGTAAACATGGTAAGTCTTTTGCTATAATTTCCAGATATTGACATACATATACATTCATACGTACATACACACATACATATATATGCGATTTGTCAAAACATTTTACAGGGTAGAAAAAAGTTAAAATAATTAGCAATATTAACAACAACAAAGCTCCCTAATGTAACAGTTTATTGTCAACCAAAGACATAAAGCAAAAGCCTATAGCTTATGTAAATATTATAATTAATTATAACTAATAATAATTAATTATTCATATTTGCCTCTTGAGCTAGTTTACTAAACTAATAATGTTTAAAAAGTAGAAATTAAAGGGATAGTTCACCCAAAAATGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa760
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017304 | Essential Splice Site | 135 | 271 | 4 | 8 |
Genomic Location (Zv9):
Chromosome 3 (position 40285179)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 40148539 |
| GRCz11 | 3 | 40290397 |
KASP Assay ID:
554-0666.1 (used for ordering genotyping assays)
KASP Sequence:
TCTAAGATTAAAGATTGCCCGTGGTATGATAGGGGTTTTTGTAAACATGG[T/A]AAGTCTTTTGCTATAATTTCCAGATATTGACATACATATACATTCATACG
Long Flanking Sequence:
ATAATGATAAATATTCTCTGTTTCCAGAATCTGGCGCTGCTGTATGCGAGTACTTCATGAGAGCTGCTTGTATGAAAGGTGAGTTGTGCATTTCAGAAGCTTGTTGAAGTGTTCATGTGTAAATCAGATTATTATTGACCCTCAATGACTCAACTTTCCCGTTTTTGACAGGTGGAATGTGTCCCTTCAGACACATCAGTGGAGAAAAGACTGTGGTGTGCAAGCATTGGCTTAGAGGCTTATGCAAGAAAGGAGATCAATGTGAATTTTTACACGAGTACGACATGACTAAGATGCCCGAGTGTTATTTCTACTCTAAATTTGGTTAGTATTGTAATATCCATCCATCCATCTATATTTTGTTTGTTAATAATGCTAATACAATGTTTGTATTGTTTTGCAGGGGAGTGCAGTAATAAAGAGTGTCCATTCTTGCACATTGACCCAGAATCTAAGATTAAAGATTGCCCGTGGTATGATAGGGGTTTTTGTAAACATGG[T/A]AAGTCTTTTGCTATAATTTCCAGATATTGACATACATATACATTCATACGTACATACACACATACATATATATGCGATTTGTCAAAACATTTTACAGGGTAGAAAAAAGTTAAAATAATTAGCAATATTAACAACAACAAAGCTCCCTAATGTAACAGTTTATTGTCAACCAAAGACATAAAGCAAAAGCCTATAGCTTATGTAAATATTATAATTAATTATAACTAATAATAATTAATTATTCATATTTGCCTCTTGAGCTAGTTTACTAAACTAATAATGTTTAAAAAGTAGAAATTAAAGGGATAGTTCACCCAAAAATGCAATTTACTCACCCTCAAGCGGTTTCAAACCTCTGAGTTTTTCTTCTGTTGAACACCTAAGAAGATATCTTGAAGAATGCTGAAAACCTGCAACCATTGTCTTTCATATTAGAAAAAAAAACTACTAAAAGTCCTAAAAAAGTCTTAAAAGCTTTAGAACTTTACTGTATGATGATA
Associated Phenotype:
Not determined