ZMP
LOC572079
Ensembl ID:
Human Orthologue:
MPP3
Human Description:
membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) [Source:HGNC Symbol;Acc:7221]
Mouse Orthologue:
Mpp3
Mouse Description:
membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) Gene [Source:MGI Symbol;Acc:MGI:132
Alleles
There are 10 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11531 | Essential Splice Site | Available for shipment | Available now |
| sa8934 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa20085 | Nonsense | Available for shipment | Available now |
| sa6907 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa20084 | Nonsense | Available for shipment | Available now |
| sa33253 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa854 | Essential Splice Site | F2 line generated | Not yet available |
| sa13793 | Nonsense | Available for shipment | Available now |
| sa12062 | Essential Splice Site | Available for shipment | Available now |
| sa6042 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa11531
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Essential Splice Site | 48 | 586 | 2 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38677891)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38541251 |
| GRCz11 | 3 | 38683109 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTCCTCAGGGATGTTTTCAGTGAGAGGAGYCTCAGCTGCCTGATGAAGG[T/C]GGGCTTGTGAGTTTTMTGCAGTATTTTGAATTKACTTTGAATTTGCTTCA
Long Flanking Sequence:
AAAAGTGGTAGATAGCTATGACGTGAAGTGGTTCAACTTGCAGAAAATACTTCATTTATTGGCTTAAAGACATTTCCCCAATTTTGTTATCAGACCAATAAAGATAACATTAAAATATTATTTTATTTGATATGGCCTCTGATATAGTCCCTAATCACCAATATTTGTATTCGGCCAAGCTCTTTATTGCAGAATTAAATCTAAGATGAATGCTATTGAATAATTTTAACGACTGATTACCTCTCTTTTAGGTCAACCCCTTCCTGATCAATGAAAGAAGCCATGCCAGTCCTCTCTGCAGGAGGAGGTACAGATCCAAACAAACACACTTATTAATGTACAGCCACAATGACACTCACTCATCTCCTGTTTACATGCAGGGTTGCACGAGACGCTTGCCCTGCTGACCTCACAGCTGCGTCCAGATGCCAATCATAAAGAGGACATGGTCTTCCTCAGGGATGTTTTCAGTGAGAGGAGCCTCAGCTGCCTGATGAAGG[T/C]GGGCTTGTGAGTTTTATGCAGTATTTTGAATTGACTTTGAATTTGCTTCATACAAGTACTGCTTACAACATGCATTATTTGCAAATAAATGTACATTTTGAGAGAATAAGCCAAAGGTGAGTAACTTATTCTCTTAGAAATAGAAGTACACAAGCTGTCACAAACTGATATAGATAGCTTAAAGGTTACAGACAGTACAAAAATATATTTTATATAATTTGACATTTTTGGTACTAATACAGTTCAAGGCAAAATCCTGATAAAACAGGAAATGAGCCAAGTAAAGTGAGTGAGTCAGTGGGTAGGTTTAATTAAGTTAACTGGCCTAGTTAACTTACTTAACCTTATTCACTGACTCACTCACTTTACGTTGGCTTATTTAGTCATTCATTCAATTTCCTCTGGCTTAGTCCCTTTATTAATCAGGGGTCGCCACAGTGGAATGAACCACCAACTTATCCAACATATGTTTACACATGCCCTTCCAGCTGCAACCCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8934
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Essential Splice Site | 74 | 586 | 3 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38675765)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38539125 |
| GRCz11 | 3 | 38680983 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGAGCCCCACCCCGGTTCTCCACAGTGCCTCCACGCTGGCAGAGGATG[T/A]AAGTGCTACAGCCTTACATATCACATCANNNNNNNNNAGATTAATGATCT
Long Flanking Sequence:
AAGAGAAAAAGTTTAGTCACATTAACATCTGAATTTTTAAATGGTTATGTGCCTTTTTATACAGTGAATGTAAACTTCTGGTTTCAACTGTAAATGAATCAAAAACTGATTTTATTCCAGCCAAAATAAAGAAAGGAGAAAAAAGTGATAGAAAATACTGTGAAAATATCCTTGCTCTGTTAAACATCACTTGGGAAATATTTTAATTAAAAGTAATTTTTTAATCATTAACATAGTATGAGATGGCTATTTTTTTTGCCTTCAACTGTATGTGGTTTTAAGGTACCAATAAAGACCCTTTATGTACACATGTGCACTGTCTGAAAGGGTACCACTCTAGTGACAGAATATATATAGCTGCAAATATGTAAGACGCTAGTCACCTAATGTTCTGTATACATGTGCATTGTGTGTTTGCTAGATTCATGAGAAGTTGCGTCAGTATGAGAAGCAGAGCCCCACCCCGGTTCTCCACAGTGCCTCCACGCTGGCAGAGGATG[T/A]AAGTGCTACAGCCTTACATATCACATCACCACAAGCAAGATTAATGATCTTTTATTGTAATACATGAGACCAGAGTTTCATGACATCTGCAGGGAATGAGGGGGTAACAGTGTGTGACAGAGCAACTTTCTGTGGTACATTTTCATGGAAAAGTTAATAATTATTTATTTTTATTTTACACATTCCTTTTAGCTAAACACTTAAGCTTTACAATTTTAGAAATTTTTCAGCTGGTCTCTGGGTCTGGTAGGAGCACTTTTAGCTTAGCATAGATGATAGAATAGAATCAGATAAAGCATGGACATCTCACTGTAAAAGGAGTCAAAAATATTGATAATTTTACTATTTAAAGCTTTACTCTTCTCTAGTTACATTGTGTAGACCATCGGTAGGGCTGCATAATTCTGTCAAAAATTTGAAAATCACGATTTTTTTTTTTTGCATTAAATCAAGATCACAATTTTCCTTACGATTCTGTAAATGTAAAATAAGGTTAATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20085
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Nonsense | 105 | 586 | 5 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38673949)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38537309 |
| GRCz11 | 3 | 38679167 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAACTAATTGTGCCTGTTCATGTCCCTTCTGGATATTAGGCGGTTTTGT[C/A]AGTTCATGACACAGTGGCACAGAAGAACTTTGACCCTGTGCTGCCTCCTC
Long Flanking Sequence:
TGAAAATATAATTGGCTGAATCGTAGAAATGCTGAATTAAGATCATGTGTAGGGTTGAATCGAGATTGTGATCTTTTTTGATTTATTGTGCTGCCCTAACCCTCGGTAAATGAAAAGCTGTTATTTTCTAGATGTCTAGGAACAATTCTCAACAATCCAACCATCCGATCAATGCCACAAAATTAACCTGTATTTTCTGTATTTCCTCATGTTCAAGAATCTGTTTCGTTTAGATATACTGTACATCATCCATTTCATGCCATGCTTTAATTACTCTAAATTAACTTACTGTATGTCTACCTTTACTGATTGGCAGGTTGCAGAGGAGTTGCAAAGTGGACCAATGAGTGTTGAGGAAAAAGAGCTGCTACATTTGCTGACATCTCCTCATCTCAAGGTATAAAGAACACCTTCATCTTCAGAGCTTCACTATACTGTAACTGTCAGTGTAAAACTAATTGTGCCTGTTCATGTCCCTTCTGGATATTAGGCGGTTTTGT[C/A]AGTTCATGACACAGTGGCACAGAAGAACTTTGACCCTGTGCTGCCTCCTCTGCCTGATGACTTTGAGGATGAACTAGACGAGGAGTCTGTCAAGATCGTCCGCCTCGTCAAAAACAAAGAACCACTGGTGAGAGAAAGAAACAACTACAGCATGAGAACAGCGACCAAGTGTTATTTTACTTGCAGTTATGAGTCTTTTAACCAATCACATATGTTTCTGTTGAGCTTATGAAAGCAGTGACTGTGGTGAAAAATAGTTTGAAAAACGGAGATTTTCAAAATGCTCTCGCAAATTGATCTTGAGGCAAAATTTTACCCTTAAACTCATTTCATGAGGAAGAGTACACGTTGTGCTTTAGTCATGTAAGTTTAGTTTCATGTCACAAGAAGATTAATGTAAATTCAGCTCACTATGAACACTCTTGTAATTCACATAAAGCTTTATTTTAGGCTCAAGTGGTATTGCTGGATTTTCAATATGATGTTGGTTTAAGATGTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6907
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Nonsense | 271 | 586 | 9 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38668380)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38531740 |
| GRCz11 | 3 | 38673598 |
KASP Assay ID:
554-4918.1 (used for ordering genotyping assays)
KASP Sequence:
AAACGTGGRGACGTCCTGCAGGTGGTCAGTCAGGATGATCAGACATGGTG[G/A]CAAGCCAAGAGAATTGGTGACTGCAAYCTTCGTGCAGGACTYGTCCCATC
Long Flanking Sequence:
CTGAAGATCATCCCGGCAATAAAAGAAGAGGACAAGCTGCAAGAGAACAAGGTGAAGAGCTATAAAAACAAAAACAAAGAATAAAACGATAAATAAAATGATTAAATGATTTAACATTAATCAGTCCAGCAGGGTGGACAGGGGTGGGCAATCTCAGTCCTGGAGGGCCGGTGTCCTACACAGTTTTGCTCCAACACTAATCAAACACACCTGAACAGGCTAATCAGTGTCTTTAAAATCACTATAAATCTACAAGCAGGTGTATTTGATTAGAGCTAAACTTCGCAGGGGACCGGCCCTCCAGGTCCAAGTTTGCCCACGCCTGTTCCACGATATTGGTCTTATCAACTGAATATGTGGTGTTTTCTTCAGGTCTACATGAGGGCACTGTTTGATTACACTCCACTGGAGGACAAAGCCACACCGTGTCAGGAGGCAGGACTTCCTTTTAAACGTGGGGACGTCCTGCAGGTGGTCAGTCAGGATGATCAGACATGGTG[G/A]CAAGCCAAGAGAATTGGTGACTGCAATCTTCGTGCAGGACTTGTCCCATCCAAGCAGTTTCAAGAAAGGTGGAGCAGATATAACGTACTGTAAAAATACACCTGGCCTCAAAACTGTTTAGTTTGCATGAAACCACAAAATTCAACACATGCAAACATGGACACACACACACACACACATAGGCTAGTTTTGGTGATTAATGAGGACTCTCCTTCAGCATAATGTATTTTCATTCATTCATTCATTTTCCTTTGGCTTAGTCCCTTTATTCTTCAGGGGTTGCCACAGTGGAATGAACCACCAAGTGTTTTACATTATAATGTATTTATACTGAAAAAACACCTTTGAAATGGCCTTACCTTACTACTACCCCTACACACAGCCCTCAGAGGGAAACTATGTCAAACTTTGAATGTGAAAAAACCTTGTCAAGAATTATTTTGTAGATTGTGTAAAAGCTGCTTCACATACATTATTATAGTATAGTATTATAGAATATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20084
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Nonsense | 299 | 586 | 10 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38667121)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38530481 |
| GRCz11 | 3 | 38672339 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGTTTGAAGCTCTCCTCATGTGCTTTTCCCCTCAGGCGCTTGGCCTAC[A/T]GAATAAAAATGGGCACTCTTCAAAACTCCAAATCTCCCAAAAAAGCTGTC
Long Flanking Sequence:
ACAGCAATTCCCTCCAACTCACCCAGAAAAGAAAACTATGTGAATTGTGAGCAATAAAAGCATGTAATAAATCCTACATATTGCACATAAGTGCTCAGTGAGTACAGTTTAATAGAGAGTGTAGCTGCTGTACCACTGTTAGAAACAGCAGTACATACAGCGATTTCCTTAGGCTAAATCAATAAAATTAATTTCAAATGATTCCCCTTTAGGTCTTTAGGTGGATAAAAATGGGCCAGTCTGTCTTTTGGTCCATTCTTTCATCACAGTGGGTTGCATCTTGGCTGGATATACTTTACACTCATGCTAAGAATGGGAGATTATTTCCCCCCTATCACCAATGAGTTTGTTTGATATTGCTCAATAGTATATCTGATGTCTCCTGAGACAGGAATATCAAATCAGACCAGTGTCTGATGTCAAGGGATCTGATGTTTTTTTTTTTTCTGCACTGTTTGAAGCTCTCCTCATGTGCTTTTCCCCTCAGGCGCTTGGCCTAC[A/T]GAATAAAAATGGGCACTCTTCAAAACTCCAAATCTCCCAAAAAAGCTGTCTGTGAGTATTTCAGTATTTTCCTTCCTTCTTACTGAAAACAAGCATCATAGATATATACACTAGATATCGCATACAGGCCCTGAGCATGCGTCAATACTGCCGCCACATTTTTACTGTGCTCCCAGGACAGATCTACCAGCCAATCTGAAGATGCTGGATTCTAGCGCTGTGTATGGGTGTAGTAACAAGCAAACAAAGAAAACAAACCATAAAGACATAGCATTTCATTGGTAATATTCCATTTTTTAGTGTTTGTGCTAAACAAGTAACTTTACTGATGACAATACAGTCACTTACTGCACTGACCATGAGGCAAAGTAGCAGCAACTAGCATTAAAGATAGAGGTGTGAACCCACAATGGTCTCACGGTTCGGTTACGATTATCATGCCATCGATTCGATTAAATTCGACATCTCGGTGCATCACGGGGCATTGACGACGCAGGGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33253
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Essential Splice Site | 449 | 586 | 15 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38651132)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38514492 |
| GRCz11 | 3 | 38656350 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACCACTTTGTGACTAAGCAGGCCTTTGATGCAGATGCACAGAATAACAA[G/A]TAAGAGATGCTGTGATGTGCTACTGCTAAATAAGTTTCATCCATTTGTGT
Long Flanking Sequence:
AATTCATGTTGACTTTAAATGACCAAAATTGTCATATCACCACACTCTAACTCGATGACACAAAATGTAGGTTTTTGAAGGATATCCAGGTCAGTTTCAGACTTGTTTGATAATAAGAATGAAATAAAATTAGGTCTGCCGAGCATCAAAAGGATGCAAAAGCACATATGGACCACTTTGATGATATTTTTATGGTCCTTTTGTGTTTTTTTTTTCCTTCCTTCTTTTTTTTTTTTTTTTAAGCTTGAAAGCTTCAGTGCCATTATAATTGCATGAAAAACAGTCTGGAATTTCACATTGTGATTCACACAAAGAAAGTCATATGGGTTTGCAAGTACATGAAGGTGAATAAATGATAATCTCTTTAAACCATATGACGATTGTGTCTCTCTGTCTTCCATCACAGACACCACACGACCAAAAAAGAGCCATGAGAAGGAGGGAGTGGAGTACCACTTTGTGACTAAGCAGGCCTTTGATGCAGATGCACAGAATAACAA[G/A]TAAGAGATGCTGTGATGTGCTACTGCTAAATAAGTTTCATCCATTTGTGTCCCGCTGTCATGCCTGATTTAATTTTGTCTGCAGATTTATAGAATACGGAGAATATAAGGAGAATCTGTATGGGACCAGTATAGAGGCCATCCGCTCGGTTCAAGCCAAAAACAAGATGTGTCTTGTAGATGTACAGCCAGAGGTAAATTAATGCAGTACTTGCCCTCAGAGTTGATTAAAACCTCAAAACTATTTTCTGACCCAAAAAAGTAGCCTATTTTATGCATTTATGCAATTGGTGCTGCTTATTTTATTTTCTCTGTGAGTATATAACCTAAAGAAATATCTCCAATGCTGATGTGCAGTGACTGGTATCACCTTCAGGTGGAGCTACTTGCCTTTTGAAACAAGCATATTAGTCATTCAACCACAAGCTGCACTTTAGACCCAATGGCTGGAATCTGTCTTGTAGTCATGGGGAGGCATTTTACCTCACACTTGCTCTCAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa854
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Essential Splice Site | 449 | 586 | 15 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38651131)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38514491 |
| GRCz11 | 3 | 38656349 |
KASP Assay ID:
554-0757.1 (used for ordering genotyping assays)
KASP Sequence:
ACCACTTTGTGACTAAGCAGGCCTTTGATGCAGATGCACAGAATAACAAG[T/A]AAGAGATGCTGTGATGTGCTACTGCTAAATAAGTTTCATCCATTTGTGTC
Long Flanking Sequence:
ATTCATGTTGACTTTAAATGACCAAAATTGTCATATCACCACACTCTAACTCGATGACACAAAATGTAGGTTTTTGAAGGATATCCAGGTCAGTTTCAGACTTGTTTGATAATAAGAATGAAATAAAATTAGGTCTGCCGAGCATCAAAAGGATGCAAAAGCACATATGGACCACTTTGATGATATTTTTATGGTCCTTTTGTGTTTTTTTTTTCCTTCCTTCTTTTTTTTTTTTTTTTAAGCTTGAAAGCTTCAGTGCCATTATAATTGCATGAAAAACAGTCTGGAATTTCACATTGTGATTCACACAAAGAAAGTCATATGGGTTTGCAAGTACATGAAGGTGAATAAATGATAATCTCTTTAAACCATATGACGATTGTGTCTCTCTGTCTTCCATCACAGACACCACACGACCAAAAAAGAGCCATGAGAAGGAGGGAGTGGAGTACCACTTTGTGACTAAGCAGGCCTTTGATGCAGATGCACAGAATAACAAG[T/A]AAGAGATGCTGTGATGTGCTACTGCTAAATAAGTTTCATCCATTTGTGTCCCGCTGTCATGCCTGATTTAATTTTGTCTGCAGATTTATAGAATACGGAGAATATAAGGAGAATCTGTATGGGACCAGTATAGAGGCCATCCGCTCGGTTCAAGCCAAAAACAAGATGTGTCTTGTAGATGTACAGCCAGAGGTAAATTAATGCAGTACTTGCCCTCAGAGTTGATTAAAACCTCAAAACTATTTTCTGACCCAAAAAAGTAGCCTATTTTATGCATTTATGCAATTGGTGCTGCTTATTTTATTTTCTCTGTGAGTATATAACCTAAAGAAATATCTCCAATGCTGATGTGCAGTGACTGGTATCACCTTCAGGTGGAGCTACTTGCCTTTTGAAACAAGCATATTAGTCATTCAACCACAAGCTGCACTTTAGACCCAATGGCTGGAATCTGTCTTGTAGTCATGGGGAGGCATTTTACCTCACACTTGCTCTCAGAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13793
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Nonsense | 474 | 586 | 16 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38650974)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38514334 |
| GRCz11 | 3 | 38656192 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGAGAATCTGTATGGGACCAGTATAGAGGCCAWCCGCTCGGTTCAAGCC[A/T]AAAACAAGAWGTGTCTTGTAGATGTACAGCCAGAGSTAAATTAATGCWGT
Long Flanking Sequence:
AAAGCACATATGGACCACTTTGATGATATTTTTATGGTCCTTTTGTGTTTTTTTTTTCCTTCCTTCTTTTTTTTTTTTTTTTAAGCTTGAAAGCTTCAGTGCCATTATAATTGCATGAAAAACAGTCTGGAATTTCACATTGTGATTCACACAAAGAAAGTCATATGGGTTTGCAAGTACATGAAGGTGAATAAATGATAATCTCTTTAAACCATATGACGATTGTGTCTCTCTGTCTTCCATCACAGACACCACACGACCAAAAAAGAGCCATGAGAAGGAGGGAGTGGAGTACCACTTTGTGACTAAGCAGGCCTTTGATGCAGATGCACAGAATAACAAGTAAGAGATGCTGTGATGTGCTACTGCTAAATAAGTTTCATCCATTTGTGTCCCGCTGTCATGCCTGATTTAATTTTGTCTGCAGATTTATAGAATACGGAGAATATAAGGAGAATCTGTATGGGACCAGTATAGAGGCCATCCGCTCGGTTCAAGCC[A/T]AAAACAAGATGTGTCTTGTAGATGTACAGCCAGAGGTAAATTAATGCAGTACTTGCCCTCAGAGTTGATTAAAACCTCAAAACTATTTTCTGACCCAAAAAAGTAGCCTATTTTATGCATTTATGCAATTGGTGCTGCTTATTTTATTTTCTCTGTGAGTATATAACCTAAAGAAATATCTCCAATGCTGATGTGCAGTGACTGGTATCACCTTCAGGTGGAGCTACTTGCCTTTTGAAACAAGCATATTAGTCATTCAACCACAAGCTGCACTTTAGACCCAATGGCTGGAATCTGTCTTGTAGTCATGGGGAGGCATTTTACCTCACACTTGCTCTCAGACATTTCTTTTTTCAATTTCACTGCTACTGACTGAAACTGAACATAAAGTTTATCAGGGCATGCATTGCCCATAATCTTCGTAATGTGTGATTTTGTAGATGTACTTGAAAGTTTAAAATTAGTTATATATTTAACATCACTTGTTGGTTATTAACAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12062
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Essential Splice Site | 485 | 586 | 16 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38650938)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38514298 |
| GRCz11 | 3 | 38656156 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTCGGTTCAAGCCWAAAACAAGAWGTGTCTTGTAGATGTACAGCCAGAG[G/C]TAAATTAATGCWGTACTTGCCCTYAGAGTTGATTAAAWCCTCWAAACTAT
Long Flanking Sequence:
GTCCTTTTGTGTTTTTTTTTTCCTTCCTTCTTTTTTTTTTTTTTTTAAGCTTGAAAGCTTCAGTGCCATTATAATTGCATGAAAAACAGTCTGGAATTTCACATTGTGATTCACACAAAGAAAGTCATATGGGTTTGCAAGTACATGAAGGTGAATAAATGATAATCTCTTTAAACCATATGACGATTGTGTCTCTCTGTCTTCCATCACAGACACCACACGACCAAAAAAGAGCCATGAGAAGGAGGGAGTGGAGTACCACTTTGTGACTAAGCAGGCCTTTGATGCAGATGCACAGAATAACAAGTAAGAGATGCTGTGATGTGCTACTGCTAAATAAGTTTCATCCATTTGTGTCCCGCTGTCATGCCTGATTTAATTTTGTCTGCAGATTTATAGAATACGGAGAATATAAGGAGAATCTGTATGGGACCAGTATAGAGGCCATCCGCTCGGTTCAAGCCAAAAACAAGATGTGTCTTGTAGATGTACAGCCAGAG[G/C]TAAATTAATGCAGTACTTGCCCTCAGAGTTGATTAAAACCTCAAAACTATTTTCTGACCCAAAAAAGTAGCCTATTTTATGCATTTATGCAATTGGTGCTGCTTATTTTATTTTCTCTGTGAGTATATAACCTAAAGAAATATCTCCAATGCTGATGTGCAGTGACTGGTATCACCTTCAGGTGGAGCTACTTGCCTTTTGAAACAAGCATATTAGTCATTCAACCACAAGCTGCACTTTAGACCCAATGGCTGGAATCTGTCTTGTAGTCATGGGGAGGCATTTTACCTCACACTTGCTCTCAGACATTTCTTTTTTCAATTTCACTGCTACTGACTGAAACTGAACATAAAGTTTATCAGGGCATGCATTGCCCATAATCTTCGTAATGTGTGATTTTGTAGATGTACTTGAAAGTTTAAAATTAGTTATATATTTAACATCACTTGTTGGTTATTAACAGTAGATATACAGTATGAAGAACATAGGTCTTAAACTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6042
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000012159 | Nonsense | 545 | 586 | 18 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 38645816)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 38509176 |
| GRCz11 | 3 | 38651034 |
KASP Assay ID:
554-3942.1 (used for ordering genotyping assays)
KASP Sequence:
AGGAGGAGGACCTACAGGAAATGCGTCTGTCKGCGCAGCAGATCGATCAA[C/T]AGTACGGTCACCTCGTGGATCGGGTCCTGATCAARGAGGACACTGCCAGT
Long Flanking Sequence:
CCACAGGCTCTGAAAGCCCTGCGAACAGCTGAATTTAAGCCTTATGTCATTTTTGTGAAACCGAAAATCCCAGAGAGCCGCAGACGCCGCAGTGCCGCCACATCGCCAGGAGGAGGAGAGCACGGCAGAATCACAGTGAGTCTGATCACAGGTTTACATCATTCAGCTCTCGAGAAACTCTGATCAACGACAATTCCTGCAGCCTCTCAAAAATCAGCCTCCAAACGGTGTAATTTAATAATAATTGCAATAAAATTGCCAACTGTCTGGATCTGAAAATCAGCTTAAGGTTCGTCTCACTTGCAAAATTTAGGGGTGAAAATCAGAGAAAATCTACAGACACGGCTTGATTGTTATTATATTTCTTCCACATGTCTGCTGACTTCTCTTTCGTTTGATTGTCAGGATTAATATTCATGCCACACGCTCTCTCTTCTCTTTTCATCTTCCAGGAGGAGGACCTACAGGAAATGCGTCTGTCGGCGCAGCAGATCGATCAA[C/T]AGTACGGTCACCTCGTGGATCGGGTCCTGATCAAGGAGGACACTGCCAGTGCCAGCACAGAACTACGTAGCATCCTGGAGAGGTTGGAGAGGGAGACTTTTTGGGTTCCTATTAGCTGGGTCAGACCCTAAGATCAACCCCTTTAGCAACATTTCAGACCGTTGATCAACACTTCCACTGAAAGCTTCTTTTCTTCCATGAAGTGCAGCCGAAATGCACTCATCCTCCTGGGAAAGGCTCCTCGGAGCTCCGCCGTCAGTGAAAGAAGCCACAAATAGGCTAAATAAGAGATTTAAAGTGACACAGATCACTGAAGTTTGAACAGATTTTGTTTTCAGGCTGGGTCATGCAGGCACATAAGCACTTGTTTTGGCATAAATGATCTAATTTATTTTTTAATGACATTAGTTATTTATTATTTGCCAAAATAGTTTGTTTACTTGATACGTTGTAGCTTCCTTTTAGGTTATTTAAGCAGTTTCAACTGCTAGGTTCACTGA
Associated Phenotype:
Not determined