Busch Lab

ZMP

setd1a

Ensembl ID:
ENSDARG00000060030
ZFIN ID:
ZDB-GENE-080521-4
Description:
KIAA0339 protein [Source:UniProtKB/TrEMBL;Acc:Q071D7]
Human Orthologue:
SETD1A
Human Description:
SET domain containing 1A [Source:HGNC Symbol;Acc:29010]
Mouse Orthologue:
Setd1a
Mouse Description:
SET domain containing 1A Gene [Source:MGI Symbol;Acc:MGI:2446244]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa11613 Nonsense Available for shipment Available now
sa14532 Nonsense Available for shipment Available now
sa20054 Missense Available for shipment Available now

Mutation Details

Allele Name:
sa11613
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083821 None None 406 None 7
ENSDART00000125022 None 683 1916 16 38
ENSDART00000131774 None None 322 None 7
ENSDART00000137062 Nonsense 64 180 2 2
ENSDART00000142133 None None 310 None 8
ENSDART00000147403 None None 255 None 2
Genomic Location (Zv9):
Chromosome 3 (position 32859955)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32591265
GRCz11 3 32722979
KASP Assay ID:
2259-3686.1 (used for ordering genotyping assays)
KASP Sequence:
CTTCTTCATCCTCTTCACCAGCAGCTTCCTCACAGACTGTCCTCYCATCC[C/T]AAACCACAGACCCCTCTGCAAGCCCTGCCCCTGACACCAGCCAGCACTTC
Long Flanking Sequence:
TAGTTTTTATGAAATTTGGAACAACTGTAATGTTTTAAAATCCATTAACTCTTCAAAAAGTTCATGACTGTTGGAAAAAGAAAGTGTACTTGAGCTTAGTTATTTTTGTTTTAAAATATCTAAATTTGTGCAATAATTCTGCAAGGTCTTATGGGTTTAAGATGACTTAAGGTTAAATAAAATTTTTTGTCTGTTGTTTCACACCATTTGCTTTTACAAACGTTTTAATTTGTCATGTGCCATTGTGCAGTTTCTTGGTTCTGTTTCTCGGTTTCAGTGCTGCACTGAATTAGTTTCTAGCTGGTGAATGTCTCTTTCCCCCAAAGTGTGTTTAACGTGTAACCCTCACATACTCTTGCCTTCAGCCGTCTCCTCGCTCGTCTGGTGAAGATATGGAAATATCTGACGAAGATGACAACACCATCACCACAGCGACATCCCATCCCGCAGCTTCTTCATCCTCTTCACCAGCAGCTTCCTCACAGACTGTCCTCCCATCC[C/T]AAACCACAGACCCCTCTGCAAGCCCTGCCCCTGACACCAGCCAGCACTTCAGCACCACCATGCCACCTCCACCCATCCCATCTTACCCTCCCCACCTCCCTCCTCCACCCCTTCCCGGCTTCTCCCTGCAGCCCCCTCCACCCCCTGGCATACCTCCTCCACTTCCACACATGGAGCTGCACCCCGAGTACCCTCCTCCGCTGCCCCACCACATGTACGATTATGCCAGCTCCATGGAGCTCATGAGCCAGTACTGTGGAGGAGCGCCCATGTCATTCCAGATGCAGACACACATGCTCAGTCGTCTCCACCAGATGCGAATGGCCTCCTCCAACAGCACAGCAGCCCCACCTGCAGAAGTCCCGCCCGCTTCTGAATATCCTCCTTCGTATCACCTTCATTCAATACCCCCTCCGCATGCACCGCCACACCACCCTCACCACCCGTACATGGACCAAGATGGGAATGTTGCCAGCCATTATGATCAGGACCACCGCTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14532
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083821 None None 406 None 7
ENSDART00000125022 Nonsense 1518 1916 30 38
ENSDART00000131774 None None 322 None 7
ENSDART00000137062 None None 180 None 2
ENSDART00000142133 None None 310 None 8
ENSDART00000147403 None None 255 None 2
Genomic Location (Zv9):
Chromosome 3 (position 32866777)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32598087
GRCz11 3 32729801
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAACCACTMCTGGATCCAGAGGGTCTATTYGTCATGCAGGAGCACAACTA[T/G]TCTAAAACTCCTGCACCTCAACACAWTACGCCTCCACAGAAGARGACGAA
Long Flanking Sequence:
TCAACCAAACGTGGCAAAGACTCTCCCCGAACACCCCCTGCGCCTGTCTGCCTCACGGTCCAAAATCTCCCTCTCGACCATGCCTCCATGGTCAAAATGGCCTACGAGGATCCCGTCCCATTGCCAACTACACAAAAGGGCCGTGCACGTGGTCGCCCTCGGACACTCAGCCAGTCGGCATCAGCTTCTCATCTTCATCCTGCTCTGGAGGAAGAGGACGAGGATGAAGAGGAACTGGAGCAGCAGTTGAAACTCAGGGAACAACTGGGAGTGTCCAGCCTGCTGCAGCTCGCCTCTGCCCCCAAGCCTGACCTCTCTGTTCTGGCCGATGTGGCGCTCAAGATGGACCCGGAGGCCGATATCGACTCAGAAGAAACTGAGACCTCTGACGAGGCAGAAGAGCACAAGCTGGAGGAAGAAGAAGGAGACTTTTTTGCCCCGCACCCACGCCAACCACTCCTGGATCCAGAGGGTCTATTCGTCATGCAGGAGCACAACTA[T/G]TCTAAAACTCCTGCACCTCAACACAATACGCCTCCACAGAAGAGGACGAAACAAGACTCCACCGTCCTGCTTCCTGCAGATCTCAATCAGCACGGGGTTCAGGAAGCTCCTGAAGAGGTCATCGGAGAAGCTCTTGCTGCCAGGGCTGAGGCTCCAGAGCTATATGGGGATCTGGACCTGCTGTGTGATGGCAGGGAGGCGGCGGAAACACAGACCAAGACCCTTAGCTCACCATACAAGAGGACCGGCTCGATCAGCAAAGAGGTGGATTTGGAGGAGAGGGGGAAAGGTAAAAACAAGAAGAGAAGTAGGAAGGACAAAGAGAATGAAGAACTACAGACTTCAAAGAAACAGAAAGAGAAGCAGGTCAAGAAACAGAAGAAACGGAAGTTAGAGGTTTGTGCTTTTGTCATTTTTCTTAGTATAGACCAGGGCTGGGGAACCTTTTTTCTATGAAGGGCCATTTACAATTTTGTAACATCGCTTAGCGGCCATTCTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20054
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083821 None None 406 None 7
ENSDART00000125022 Missense 1583 1916 31 38
ENSDART00000131774 None None 322 None 7
ENSDART00000137062 None None 180 None 2
ENSDART00000142133 None None 310 None 8
ENSDART00000147403 None None 255 None 2
Genomic Location (Zv9):
Chromosome 3 (position 32867049)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32598359
GRCz11 3 32730073
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTTAGCTCACCATACAAGAGGACCGGCTCGATCAGCAAAGAGGTGGATT[T/A]GGAGGAGAGGGGGAAAGGTAAAAACAAGAAGAGAAGTAGGAAGGACAAAG
Long Flanking Sequence:
GTCCAGCCTGCTGCAGCTCGCCTCTGCCCCCAAGCCTGACCTCTCTGTTCTGGCCGATGTGGCGCTCAAGATGGACCCGGAGGCCGATATCGACTCAGAAGAAACTGAGACCTCTGACGAGGCAGAAGAGCACAAGCTGGAGGAAGAAGAAGGAGACTTTTTTGCCCCGCACCCACGCCAACCACTCCTGGATCCAGAGGGTCTATTCGTCATGCAGGAGCACAACTATTCTAAAACTCCTGCACCTCAACACAATACGCCTCCACAGAAGAGGACGAAACAAGACTCCACCGTCCTGCTTCCTGCAGATCTCAATCAGCACGGGGTTCAGGAAGCTCCTGAAGAGGTCATCGGAGAAGCTCTTGCTGCCAGGGCTGAGGCTCCAGAGCTATATGGGGATCTGGACCTGCTGTGTGATGGCAGGGAGGCGGCGGAAACACAGACCAAGACCCTTAGCTCACCATACAAGAGGACCGGCTCGATCAGCAAAGAGGTGGATT[T/A]GGAGGAGAGGGGGAAAGGTAAAAACAAGAAGAGAAGTAGGAAGGACAAAGAGAATGAAGAACTACAGACTTCAAAGAAACAGAAAGAGAAGCAGGTCAAGAAACAGAAGAAACGGAAGTTAGAGGTTTGTGCTTTTGTCATTTTTCTTAGTATAGACCAGGGCTGGGGAACCTTTTTTCTATGAAGGGCCATTTACAATTTTGTAACATCGCTTAGCGGCCATTCTAAATTATAGGGCTGCTCAATTATGAGAAAAATCTTAATCGCGATTATTTTGGTAATAATTGTAATCACAATTATTTAAAACTAATATCAGTTGAAGTCAAAATTATTTGCCCTCCTGTGAATTTTGTTGTTTTATATTTAAATATTTCCCAAATCATGCTTAACAGAGGAATTTTTTACAGTGTTTCCTATCAAATTTTTTCTTCAGGATAAAGGTTTATTTGTTTTATTTCGGCTAGAAAAAAAGCAGTTTAAAATATTTTGAAACCTATTTT
Associated Phenotype:
Not determined