Busch Lab

ZMP

cdc27

Ensembl ID:
ENSDARG00000056258
ZFIN ID:
ZDB-GENE-990706-2
Description:
cell division cycle protein 27 homolog [Source:RefSeq peptide;Acc:NP_958857]
Human Orthologue:
CDC27
Human Description:
cell division cycle 27 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1728]
Mouse Orthologue:
Cdc27
Mouse Description:
cell division cycle 27 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:102685]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa19990 Nonsense Available for shipment Available now
sa33150 Nonsense Mutation detected in F1 DNA Not yet available
sa6033 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa19990
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078707 Nonsense 120 790 4 19
ENSDART00000132190 Nonsense 120 833 4 19
ENSDART00000147721 None None 67 None 3

The following transcripts of ENSDARG00000056258 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 22252950)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 21909341
GRCz11 3 22039889
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATGACATCATAACTGAGTTTGGAGACTCGGCCTGCTTCACTCTGGCAT[T/A]GCTCGGACAAATTTACTGGTATGTTGAGCTTGTTTGGCTTCTAAACTTGA
Long Flanking Sequence:
TCAAAGTTAAATGCTGAGTTACTCTGTTTTTTGATATTTTATTTTATACTCTGTTTTTTATTTTATGTTGCATGAATCCTTTTTGTTTTTGACTGAATCAAGCAGTTTAAATCTTGCTTAGAAGTGTATGAGTTTATATGCTGATTTAATTTAACATTCATGCCATCAATGTATTTTGAATGTAGCAGTCTGTAAGTGAGATGACTTCAAGAACTATCAATACAATAGAAAGATTAGTATTGGTCATAGAAAGGAATAGAATTGGAAGCAATAAATCTCATTACCATAAATGTAATGGCTTCACCTTCTTTTTAGATTCATATCATGTCTAATGAAGCTCTTCAATGTTTTTGTAATTTTTAGTTAATTTAATTGTTGTTTATTGTCTGTCAGGTTGGCAGAAGGAGAACAGATCCTGACCGGAGGAGTTTTGAACAAACAGAAAAGTCAAGATGACATCATAACTGAGTTTGGAGACTCGGCCTGCTTCACTCTGGCAT[T/A]GCTCGGACAAATTTACTGGTATGTTGAGCTTGTTTGGCTTCTAAACTTGATCTGCTGAAATCCGTAAACTGTAGCGAAGCTATGAAGATATCTACTCTGCTGTTATTGTTGAGCAAAGAGCTGTTAGTGAGAAATTGTTGTTTAATTTGTGGAAAGGCGACTGGTACAAAGCTCTTAATGGATTTAGTGGTAACCAAGCCTGTTTTGAGTTTTTTGATGTGCTCAGTGACCATAAGATTGCTTGAATTCAGTATTTCTACAGGTAGCTGGTGGCAGGTTGTTTAGTAACAGAGGCTCCTTTGTTTTTTTTCTATGGGAGATTCCTTTTCTAATGAATCATGTGATGTTGTGTAAAGTAGGGTCATCCAAAATACTTACTTTGTTTTTTTGGTACGGAAATTTATAAATGTCCACTCCCTGCTAACATTTGAGTGCTGTTGAGCCGGTTCTTAAACACTGCAGACTGGCCAGTGTTCACATTCAACCGATATAATGGATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33150
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078707 None None 790 None 19
ENSDART00000132190 Nonsense 484 833 12 19
ENSDART00000147721 None None 67 None 3

The following transcripts of ENSDARG00000056258 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 22262801)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 21919192
GRCz11 3 22049740
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGACCCTGATGCGGGATATTGGGAGGGGATATCTTGCTCTCTGCTCTTA[T/A]AACTGCCGAGAGGCCATTAACATCTTGAGTCAGCTACCTTCACACCATTA
Long Flanking Sequence:
CAAATTAAACAAAATAAAATTACATGGTGAGAACACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGCATATTATCATAGTGATCCATGACGTTACAGGGTAATTAAAACAAAATTGTGGTGATAAGAAGAGTATTTGAGACTATATACTTTCTTACTTTGATTATAGTTTGAATTATTCCCATTTATTTGTAGAACAACTTTACAGTACAAAACTAAACATGCTGCATTATCCTGAACATTATAAGCATTTCATTGTCGTAGAGACTTATGTATAAAGTTGAAAGTACATTATTTATATTATTAATTCATGCTTTTTTGTGTTAGATTTTGAGCTACTACTTAATTTTCTCTTTGGGCTACTTAATTTTTCTCTTTTCTCTTGTATTTGAGCAACACCCTGAAGCAGGTTGCTGATTTTGTTTGCGGTTTTCTTTAGACGGGCTGATGACCCTGATGCGGGATATTGGGAGGGGATATCTTGCTCTCTGCTCTTA[T/A]AACTGCCGAGAGGCCATTAACATCTTGAGTCAGCTACCTTCACACCATTACAACACGGGCTGGGTGCTGGGTCAGATCGGGCGAGCACACTTTGAACTGGCTGAATACATGCAGGTGAGTCTGCGTTGCAGAAATGAGGTGAAATCAATTACCAAAGGCATTCAAATTATAATGGCAAGTAGTGGAAAATGTTTTTGTTTGTTCTCACAGAAGATATTTTTGTCTGTTTAATTAGGCGGAGAGGATTTTTTCAGAAGTCCGACGTATAGAGAGCTATCGAGTAGAGGGTATGGACATCTACTCAACAACACTTTGGCATTTACAAAAGGATGTGGCACTTTCTGCCCTATCTAAAGACCTCACTGACATGGACAAAAACTCACCTGAGGTAAGTTTATCAAGGCAGTAATGCAATTATTAGTTGGAATATTATTCAGTTCAGTAAATCAGCTGCTTATCTTTTTGTTTTTCCACCTCTTTACAGCCCTGGTGTGTAGTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6033
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078707 Nonsense 768 790 19 19
ENSDART00000132190 Nonsense 811 833 19 19
ENSDART00000147721 None None 67 None 3

The following transcripts of ENSDARG00000056258 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 3 (position 22267333)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 21923724
GRCz11 3 22054272
KASP Assay ID:
554-3813.1 (used for ordering genotyping assays)
KASP Sequence:
GTGCTCGGTGTAATGCTGTTTGTTGGTCTCTGCAGCGGAGGTGGAGGAAT[C/A]ACAGGAGAGCAGTATGACGGACGCTGACGACACTCAGCTCCACACGACGG
Long Flanking Sequence:
TCTTTTAACATGTTGACTAACACTATAAATAGTTTGAAAAGTTAAATGACCAGTCTATTCTTTACAGGCGGCTCTGCAGGAGCTTGAAGAGCTGAAACAAATAGTGCCCAAAGAGTCCCTTGTTTACTTCTTAATAGGAAAGGTACACCTACAGCAAAACGGCTTACTTGATTTCATTTAACATCTTGTAACCGCTAATGTCCCTGTTTGGAAACTCCTGAATCAAATGTTCGTCATCTCTATAGGTCTATAAGAAGCTTGGCCAGACTCATCTGGCATTAATGAACTTTTCCTGGGCCATGGACTTGGACCCCAAAGGGGCCAATAATCAGATCAAAGAGGCCATAGATAAGCGATACCTCCCAGATGATGATGAGCCTGTCACTCCTGATGACTATCCCTACTGCTCAAGTAAGTCTCCAGCTCAGTGAGTCATTAATGCAGGGCTGTGTGCTCGGTGTAATGCTGTTTGTTGGTCTCTGCAGCGGAGGTGGAGGAAT[C/A]ACAGGAGAGCAGTATGACGGACGCTGACGACACTCAGCTCCACACGACGGAGAGCGACGAGGTTCTCTAGCCCCCTGACACCACTCTGGACTTTCAAATAATGCCAATTTGGGGGCTATTCGAAGACTCCAGCTCAAAAAAAAAACAGGAGGAAGAAGAAAAAAGGAAAACAAACTGCTGCTAATAACAGTACCTCCTCATTTTTGTCATTTCATTTTCTTCATTCGTTCTTGCCTTTTTTCCCACCCTCCCCCACCTCTTGTCGTCATGCCTTAGAGGTCTCTCATCGGTCTGATCTTCTGGTCCTGTCTCATCTCCTATCACAACTGGCAGGTGTCCTTTTATCACAGACACAGTCGCTTGAACAATTCAAGTTCTGCCTGAGCTCAAATTGCCCAGATTTGCCCATGACTCCACCGTCTTCTCAACAGGCTAATTGACTTACTTAACTTCACACAGCTCCACAGACTTTCATGGATGTACCTGTCTTAATGCTTAGG
Associated Phenotype:
Not determined