ZMP
zgc:64085
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC393380 [Source:RefSeq peptide;Acc:NP_956702]
Human Orthologue:
TSPAN1
Human Description:
tetraspanin 1 [Source:HGNC Symbol;Acc:20657]
Mouse Orthologue:
Tspan1
Mouse Description:
tetraspanin 1 Gene [Source:MGI Symbol;Acc:MGI:1914055]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19962 | Essential Splice Site | Available for shipment | Available now |
| sa13078 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19962
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033638 | Essential Splice Site | 108 | 234 | 5 | 8 |
| ENSDART00000140577 | Essential Splice Site | 117 | 243 | 5 | 8 |
Genomic Location (Zv9):
Chromosome 3 (position 14238382)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14483889 |
| GRCz11 | 3 | 14633689 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTTATGCATACTGATGGAAATAGCCATGGCTCTTCTTTTGTGTATTTC[A/C]GGCAGAAACGCTGATTAAACAGTTGGGAGTTGATGCTGTGAAAAGCCTCC
Long Flanking Sequence:
TACCTAATTGTAACACAGCACAATACAGAAATTCAGGGCCTCCTGAGTAGCGTCCTGTCACCACTTTTATGCCACGGTGTCAGCAGCTGGATTAGAGACCTTGGGTGACGTCAGGGGGGGGCACGGCAAACAGCTGGGCAGCGGTAGCCAATCGGAGCCACTGTATGGGTGGAAGCAGGAGAGAGGTAGAGAGCGAGCGAGCACAGGGGGAGAGAGAGAGACTAGCGAAAAAAAAATAATAGTAATCATGCAACACAGGAATGTAACAGTTATGCAAATATGGTTATGTAAAATTGTATAATATTTGTTGATGAATGGAAATGTTTTTTTTTTTATACTCTCCTCAGTTCTTCATTATTATTCTGATCATCTTCATTGCTGAAGTTGCCGGGGCGATTGTGATTCTGGCGTTTAGGCCGCTGGTGAGTTTTTGCATGTGATATTTTCCACTCTTTATGCATACTGATGGAAATAGCCATGGCTCTTCTTTTGTGTATTTC[A/C]GGCAGAAACGCTGATTAAACAGTTGGGAGTTGATGCTGTGAAAAGCCTCCAAAGTGACTTTGGGAAAAACCAAGACGTCACCGGATTGTGGAACACAACAATGACTGGGGTCAGTAAAACTTTGGTTAATAAAAAAAAAAAAAACAAGAAATACATCTTCACATTACTATAGAATCATATTTTTTGTATGTAATGCATCATTTGTTACATCGTGTAAGCTAATAATCTCCAGTGTATAAGCAATTGGTTGTTTTTGTTGTCCATTTTCCTCTTAATTCTGAGTCTTGCTCTGACCTTTTTTTTTTTTTTACTTTTGAAATTTTTTACACCTGACTGACTTCTGACTTTTTTTACACCTTGCAATTTTGTCTTTTTTTTTTAATAAGTTCTCATCTCATGGTTCTGACTTCAGGAATTCTGAGTTGCATCTTATTTCTGACTTTTTTAGAATTAGTTTTCATCTCAGTTCTGACTTTTTTTTAAATTCTAAGGTCACATCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13078
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033638 | Nonsense | 190 | 234 | 7 | 8 |
| ENSDART00000140577 | Nonsense | 199 | 243 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 3 (position 14240073)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14485580 |
| GRCz11 | 3 | 14635380 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTTCAKCTTTATATTTGTGTKTGTTTTCCYCCWAGACTGTMACAGGTTG[T/A]TTTCCAGCACWGATAAAGCTGGTGGATAAAAATGCCGTTATCATCATAGC
Long Flanking Sequence:
AAGCCGAAAAGAAAATGAATGAATGAATGAATGAGATCTGTAGCTCATAAACAATATAAAACTTTCATCCAGTAAAATCATAGCATATACAGTAGTAGCATAGAACATCACCTGATATATTTATATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATATTTTATACACTATTTATATTTGATCAGCAGCTGATGTTGAATCTAACTCTCACTGCTTCTGTATCTCCTGTAGATGAAATGCTGTGGATTCAACAACTATACGGATTTCACAAACTCTTTTTTCGTGAACAGCACCAAGAATTATCCGGTGCAGTGCTGTAACACATCTCCATGTAATCAGGCGGCTGTTATGAATTCGGTGAGACATTAGTAATACATATTCATTTACAGTCTTGAAGAAATTCTAGAGGATTGGACACCTTTTCATCTTTATATTTGTGTGTGTTTTCCCCCAAGACTGTCACAGGTTG[T/A]TTTCCAGCACTGATAAAGCTGGTGGATAAAAATGCCGTTATCATCATAGCCGTAGCATTGGGCATCGCTGCGCTTGAGGTAAAGCACACGTTTCATTTCTATCAATGCTTTTCAAAGTGATTTTAAGACTGCAATTTACAATTTACTTGCAATTTAAGATTTAATCAAAATGCAAACGATGTAAATAAATAAATTGCATAAGTTAGCATCTACTTCCAACGATAAAATAATATTACAGAGGGAGATTTACATAGTCTCTTTTATAACTTGTTTTAATGACTTATTATTTAATGATTTATTGTATTTGGTTTGAGATATGAATAAATAAATAAAATGTAAATCTTATATATAATCTTATATATATATATATATATATATATATATAGTGTGTGCAAATATTTATTAATTTATTTCTATCTTAAACTATATGTAGTTTGGTTTGAGATTTAAATAAATAAGTAAATAAATAAATAAATAAATAGTATAATATAGTATAGTAT
Associated Phenotype:
Not determined