ZMP
LOC100006417
Ensembl ID:
Human Orthologue:
TCF20
Human Description:
transcription factor 20 (AR1) [Source:HGNC Symbol;Acc:11631]
Mouse Orthologues:
AU017455, Tcf20
Mouse Descriptions:
expressed sequence AU017455 Gene [Source:MGI Symbol;Acc:MGI:2145729]
transcription factor 20 Gene [Source:MGI Symbol;Acc:MGI:108399]
transcription factor 20 Gene [Source:MGI Symbol;Acc:MGI:108399]
Alleles
There are 13 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19926 | Nonsense | Available for shipment | Available now |
| sa33072 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa11692 | Nonsense | Available for shipment | Available now |
| sa33071 | Nonsense | Available for shipment | Available now |
| sa17263 | Nonsense | Available for shipment | Available now |
| sa11228 | Nonsense | Available for shipment | Available now |
| sa33070 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa19925 | Nonsense | Available for shipment | Available now |
| sa10342 | Nonsense | Available for shipment | Available now |
| sa12722 | Nonsense | Available for shipment | Available now |
| sa39970 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa1165 | Essential Splice Site | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa19926
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 26 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2032156)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1499333 |
| GRCz11 | 3 | 1268779 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTCTCCACCCAGGGTTCAGCCGTGGAGCAGGCGTAGTCAGTTCCCCATA[T/A]CAGACCCACCCGTCAGACCTTCAGATCTCCCCCAGGACCTCCGAGGACTA
Long Flanking Sequence:
GAAAGACTTGTGTGCTGCAAACTTGTTAAAGAACTGTGACAGTTGTACTGCATGGCTGCTACCGAACGGCACGCATCACACTACAGCATCTAAATACTGACGCTCTTCTGATCAGACGTGCTTGAGTGGCCGTGTTGCTGGTGTATCTTCACCTCACGGCTTATAGACATTTTGTGACAACACTAAAACTTCATCCGCTCCTTGGATATAGTGCCAAACCACACAGTGGCGATTGTGACTCAGTTCTTCTGTACATGAATGTGTAGCTGCTGTGTTCCCCATCCTCTGGCGCTCGGTGTTAACTAGTGGACATTTTCTGGAGCCTGCTGCAGATGCATCTGTAATCGCACGGCTGAAACGTTCCCGTTTGGATCCTTTAAGAAAGGTTACCGAGACAGTTTTGTGAAACTCTAACACACAGAGATGCAGAATTTCCCCAACAGTCCTGTCCCTCTCCACCCAGGGTTCAGCCGTGGAGCAGGCGTAGTCAGTTCCCCATA[T/A]CAGACCCACCCGTCAGACCTTCAGATCTCCCCCAGGACCTCCGAGGACTATGTGTCCCTTCAGCAGGCCCAGACCAGCCTACAGAGCCACGGGCAGCACTTGCACCTGCGGGCCCAGCAGCAGCAGCACCTGCATGCTCCGGTACATGGCTACAGCTCCAGGCGAGCGGTCACAGAGATGCCGCAGAGCAGCGCGGGGGGGAACTCCTACCGAAAGGACAGTATGGATTATTACTTCTCTGTGAGTGGGCGAGACCGAAGCCGAAGAGGTGGAGCCGCTTACGGAGCCGGATTTAGGTACACAAACGTGGATGGGCACCAGTACCAACACCTCTCCGGTTCAGGGTCTTCCTCCGGAATGATTTCTCCCTACTCCATGGACTGTGGCTCTGCAGTCGTGGGGAGTAATAGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAGCAATACAGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCATCAACGGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33072
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 27 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2032155)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1499332 |
| GRCz11 | 3 | 1268778 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTCCACCCAGGGTTCAGCCGTGGAGCAGGCGTAGTCAGTTCCCCATAT[C/T]AGACCCACCCGTCAGACCTTCAGATCTCCCCCAGGACCTCCGAGGACTAT
Long Flanking Sequence:
AAAGACTTGTGTGCTGCAAACTTGTTAAAGAACTGTGACAGTTGTACTGCATGGCTGCTACCGAACGGCACGCATCACACTACAGCATCTAAATACTGACGCTCTTCTGATCAGACGTGCTTGAGTGGCCGTGTTGCTGGTGTATCTTCACCTCACGGCTTATAGACATTTTGTGACAACACTAAAACTTCATCCGCTCCTTGGATATAGTGCCAAACCACACAGTGGCGATTGTGACTCAGTTCTTCTGTACATGAATGTGTAGCTGCTGTGTTCCCCATCCTCTGGCGCTCGGTGTTAACTAGTGGACATTTTCTGGAGCCTGCTGCAGATGCATCTGTAATCGCACGGCTGAAACGTTCCCGTTTGGATCCTTTAAGAAAGGTTACCGAGACAGTTTTGTGAAACTCTAACACACAGAGATGCAGAATTTCCCCAACAGTCCTGTCCCTCTCCACCCAGGGTTCAGCCGTGGAGCAGGCGTAGTCAGTTCCCCATAT[C/T]AGACCCACCCGTCAGACCTTCAGATCTCCCCCAGGACCTCCGAGGACTATGTGTCCCTTCAGCAGGCCCAGACCAGCCTACAGAGCCACGGGCAGCACTTGCACCTGCGGGCCCAGCAGCAGCAGCACCTGCATGCTCCGGTACATGGCTACAGCTCCAGGCGAGCGGTCACAGAGATGCCGCAGAGCAGCGCGGGGGGGAACTCCTACCGAAAGGACAGTATGGATTATTACTTCTCTGTGAGTGGGCGAGACCGAAGCCGAAGAGGTGGAGCCGCTTACGGAGCCGGATTTAGGTACACAAACGTGGATGGGCACCAGTACCAACACCTCTCCGGTTCAGGGTCTTCCTCCGGAATGATTTCTCCCTACTCCATGGACTGTGGCTCTGCAGTCGTGGGGAGTAATAGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAGCAATACAGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCATCAACGGCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11692
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 174 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2031714)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1498891 |
| GRCz11 | 3 | 1268337 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGTCGTGGGGAGTAATMGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAG[C/T]AATACAGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCAT
Long Flanking Sequence:
GTCCTGTCCCTCTCCACCCAGGGTTCAGCCGTGGAGCAGGCGTAGTCAGTTCCCCATATCAGACCCACCCGTCAGACCTTCAGATCTCCCCCAGGACCTCCGAGGACTATGTGTCCCTTCAGCAGGCCCAGACCAGCCTACAGAGCCACGGGCAGCACTTGCACCTGCGGGCCCAGCAGCAGCAGCACCTGCATGCTCCGGTACATGGCTACAGCTCCAGGCGAGCGGTCACAGAGATGCCGCAGAGCAGCGCGGGGGGGAACTCCTACCGAAAGGACAGTATGGATTATTACTTCTCTGTGAGTGGGCGAGACCGAAGCCGAAGAGGTGGAGCCGCTTACGGAGCCGGATTTAGGTACACAAACGTGGATGGGCACCAGTACCAACACCTCTCCGGTTCAGGGTCTTCCTCCGGAATGATTTCTCCCTACTCCATGGACTGTGGCTCTGCAGTCGTGGGGAGTAATAGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAG[C/T]AATACAGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCATCAACGGCAGAAATATCCCTCACATCAAGGCTTATTACACCAAGGTCAGCATCACCGGACATATGCGCTCTCCGGAAACAGAATCCCCGCTCAGTTCGGACACTACGCCACTATCAATGCAACCTCAGGCTCCTCTGGAATGTATAACTCTCCACCGCAGAGATACGACGTGAGCAGCAGTAGCAGCACAGAAGCCAAAATCAATGACTCTCCCACGCAGTCTAATCCAAATCATCATAGCAGTTCATCAGCTTCCAACAGCTGCGAGGCTATGGGGCAGGGCTACTCCTCGTCTGCACATCCACCGTATTCACCACAGTCGCTTCACAAGCACGGCCCCCATTCCCAGCGTACCCCTCAACACAGCGCTGTCGCAGGCTATGACCTATCCCTCAAAATGCAGCATCTGCACACCAAACTGCCCCATTCCTCTGTCTCCTCCAGCCCGTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33071
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 175 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2031709)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1498886 |
| GRCz11 | 3 | 1268332 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGGGAGTAATAGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAGCAATA[C/A]AGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCATCAACG
Long Flanking Sequence:
GTCCCTCTCCACCCAGGGTTCAGCCGTGGAGCAGGCGTAGTCAGTTCCCCATATCAGACCCACCCGTCAGACCTTCAGATCTCCCCCAGGACCTCCGAGGACTATGTGTCCCTTCAGCAGGCCCAGACCAGCCTACAGAGCCACGGGCAGCACTTGCACCTGCGGGCCCAGCAGCAGCAGCACCTGCATGCTCCGGTACATGGCTACAGCTCCAGGCGAGCGGTCACAGAGATGCCGCAGAGCAGCGCGGGGGGGAACTCCTACCGAAAGGACAGTATGGATTATTACTTCTCTGTGAGTGGGCGAGACCGAAGCCGAAGAGGTGGAGCCGCTTACGGAGCCGGATTTAGGTACACAAACGTGGATGGGCACCAGTACCAACACCTCTCCGGTTCAGGGTCTTCCTCCGGAATGATTTCTCCCTACTCCATGGACTGTGGCTCTGCAGTCGTGGGGAGTAATAGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAGCAATA[C/A]AGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCATCAACGGCAGAAATATCCCTCACATCAAGGCTTATTACACCAAGGTCAGCATCACCGGACATATGCGCTCTCCGGAAACAGAATCCCCGCTCAGTTCGGACACTACGCCACTATCAATGCAACCTCAGGCTCCTCTGGAATGTATAACTCTCCACCGCAGAGATACGACGTGAGCAGCAGTAGCAGCACAGAAGCCAAAATCAATGACTCTCCCACGCAGTCTAATCCAAATCATCATAGCAGTTCATCAGCTTCCAACAGCTGCGAGGCTATGGGGCAGGGCTACTCCTCGTCTGCACATCCACCGTATTCACCACAGTCGCTTCACAAGCACGGCCCCCATTCCCAGCGTACCCCTCAACACAGCGCTGTCGCAGGCTATGACCTATCCCTCAAAATGCAGCATCTGCACACCAAACTGCCCCATTCCTCTGTCTCCTCCAGCCCGTCTCTGCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17263
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 297 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2031344)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1498521 |
| GRCz11 | 3 | 1267967 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGGGGCAGGGCKACTCCTCGTCWGCACAYCCACCGTATTCACCACAGT[C/A]GCTTCACAAGCACGGCCCCCATTCCCAGCGTACCCCTCAACACAGYGCTG
Long Flanking Sequence:
TGGGCACCAGTACCAACACCTCTCCGGTTCAGGGTCTTCCTCCGGAATGATTTCTCCCTACTCCATGGACTGTGGCTCTGCAGTCGTGGGGAGTAATAGCAGTGCAGCTGGTTCGTTTTCTCCTTCCCAGCAATACAGTATGGCTCACGCTGCTTCAGTACAATCAAGTGCTCAAATGCATCAACGGCAGAAATATCCCTCACATCAAGGCTTATTACACCAAGGTCAGCATCACCGGACATATGCGCTCTCCGGAAACAGAATCCCCGCTCAGTTCGGACACTACGCCACTATCAATGCAACCTCAGGCTCCTCTGGAATGTATAACTCTCCACCGCAGAGATACGACGTGAGCAGCAGTAGCAGCACAGAAGCCAAAATCAATGACTCTCCCACGCAGTCTAATCCAAATCATCATAGCAGTTCATCAGCTTCCAACAGCTGCGAGGCTATGGGGCAGGGCTACTCCTCGTCTGCACATCCACCGTATTCACCACAGT[C/A]GCTTCACAAGCACGGCCCCCATTCCCAGCGTACCCCTCAACACAGCGCTGTCGCAGGCTATGACCTATCCCTCAAAATGCAGCATCTGCACACCAAACTGCCCCATTCCTCTGTCTCCTCCAGCCCGTCTCTGCCCTCACACACCCCTCAAGACCTCACCAAGTCTCCTATGCACACTCAAAATCAACAGGCTCAGATTCATCAGAACTTCAGTCCTATCTCTAATCCCTCCCCAGCTCCATCTGCGGTGCAGTCTCCAAGCTGCAGCTCGTCCTCATCTCCACTGCTAGGGGTCTCGGAGGGAAACAGTGCTCAGCTGCAGGCGTCTTCACACCCTGCTGCCCCAAACGCACGCAGCAGCCAGAGTCACGCACGCCTCCTGCAGGCCGTCCCCCAGCTGAGCCCCACTCCCCATTCCAATAGCAGCATCAGTAGCTGTGGTAGCGGAGGTGGAAATAAGTCTGCCACTCTGAATCACAGTGCAGGGATTGGTCATGCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11228
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 857 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2029665)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1496842 |
| GRCz11 | 3 | 1266288 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCYGTTCAATCTCACCCAGTGTCATTTAAATGCAGCAATCCAGAGGTA[C/T]AATACACTGCCGTAAAGAGCAAGGACAAATTAGGGCTAGGTAGTGTTATG
Long Flanking Sequence:
ATGATGAGAAGGGAACTAAGGGACCACAAATCAAAATGATAAAAGATGAAGAAAGCGATGATGAATGTGCAGATCCTCCGTGTCATAGAACGAGTTCAGAGAACAGACTGTTGGTTCCTCTCAAACAGGCCGAGCGAGAGTCCTGTGCTCAATCATTAGAAAATCCCAGTAAAAATGTGAATGTTCCAGAACAACACAATGTTGGAGGTGTAGGGGTTATTGTCTCTGCTCGTTCTGAACTGAACACAGAATCAAGCAAGCACACAGGAGTCAAATCTCCACGTTACAGTGTTTCTCATTACCCAAACAAACCCAGCAGTATTGAGGAGCAGCATGATGTCAATGTCTTAAAAGAGACGAGAAACCAGAATGGAGAAGGAGAGATGTCCATGGAAGCATATGTGTCACAGTATGATATTTCCCCTAAACGAGAATTTGGCCAAAACATTGTTTCTGTTCAATCTCACCCAGTGTCATTTAAATGCAGCAATCCAGAGGTA[C/T]AATACACTGCCGTAAAGAGCAAGGACAAATTAGGGCTAGGTAGTGTTATGGGTGCAAACAGAGGCCAGAATTACCATACACTACAGGCCAGCTATGGGTCTATTGCCAGAAAGGAGATTGCTGGTGTATTTGCTATGGAGGGGGGAAGAGGAATGGTCTCAAGAAGCCAGGATAACAATTCTCAGTTTCAGCAGGTATTTCCAAGCCTTTTACAAGAAGTCCTTCAAGGCCATCACTTGGATCGCCGCTATGTACGTGCTGAACAGACATCTAGTGCTCATCAACATTCTCAAGATACGTCTCAGCACCGTTTTCAAACCAGGCTACCTTACAGTATGATTGAAAACTTGAGTTCACATTCAATGGGCTCTCAATCAGTTATGGGGGGACTTAATGTCCAGTTTAGTCAATTGGCCCCTGGAAAATCTCCAAACTCAAGTCAGGGACCAGATAGTGAGATTGGTTTAGGCCCTTCTCATCCCTCTTGGGATTCTGAAGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33070
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 1019 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2029177)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1496354 |
| GRCz11 | 3 | 1265800 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTCAGGGACCAGATAGTGAGATTGGTTTAGGCCCTTCTCATCCCTCTTG[G/A]GATTCTGAAGCACATAAGACTCACGGGATCTCCATAGAGAAAAGCAAAAC
Long Flanking Sequence:
AATCCAGAGGTACAATACACTGCCGTAAAGAGCAAGGACAAATTAGGGCTAGGTAGTGTTATGGGTGCAAACAGAGGCCAGAATTACCATACACTACAGGCCAGCTATGGGTCTATTGCCAGAAAGGAGATTGCTGGTGTATTTGCTATGGAGGGGGGAAGAGGAATGGTCTCAAGAAGCCAGGATAACAATTCTCAGTTTCAGCAGGTATTTCCAAGCCTTTTACAAGAAGTCCTTCAAGGCCATCACTTGGATCGCCGCTATGTACGTGCTGAACAGACATCTAGTGCTCATCAACATTCTCAAGATACGTCTCAGCACCGTTTTCAAACCAGGCTACCTTACAGTATGATTGAAAACTTGAGTTCACATTCAATGGGCTCTCAATCAGTTATGGGGGGACTTAATGTCCAGTTTAGTCAATTGGCCCCTGGAAAATCTCCAAACTCAAGTCAGGGACCAGATAGTGAGATTGGTTTAGGCCCTTCTCATCCCTCTTG[G/A]GATTCTGAAGCACATAAGACTCACGGGATCTCCATAGAGAAAAGCAAAACTAGTCTGTCTCCCAGCCAGTCCTCCCACATGCAGCAGTCTTTAGATCTCTCAACAGGAGCCCCTCCAAAGCACATCAACCTGGCTGACTATTCTTTGCAGCACAGAAAACCATCCAGATATGGTACCTCTCCTTCAGCTGTAGAACAATTGCTTTTACAGGAAGCTGAGCCACTGGCATGCAATGTAGGTCCTGTCGGCCATGTTCAATCCCAGGCATCCTCATCCTCTGGAAGGCGCTCGGTAATCTGTGATGTGTCGCCTTCTCGACGAACAACACCAGAAAGAGAGAGAGGATCCTCTGGACCCTCAGTCATTCAGCAGCCGTTTTCTTCTGGGTCTAATGAGCAAGACTGCTGCAAGGAAGAAATTAAAGCAAAGAAAGCACAAATCAAGGAGGACCCATCAAAGGTTGAAGCTGCAGGTCAGAACACAGATCGCTACTGCAGCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19925
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 1332 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2028239)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1495416 |
| GRCz11 | 3 | 1264862 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGCACGGTCCTCAGAGAATCCCCGAACAGAAATGTAAAAGCCAGCCTT[C/A]AAGTGAAATTCTGTCTAGTCCACATCGTATATCTCAACAGCACTCTTATC
Long Flanking Sequence:
AATCAAGGAGGACCCATCAAAGGTTGAAGCTGCAGGTCAGAACACAGATCGCTACTGCAGCACACCACCCAGTAAGGAGTCTAATAAGCCTCTTCGCCATCCTGTAGATAGTGATCCTGACTTAGAAAAGACCAGCAGTGCCAAGGGCAACAGTGATGCCCTCAGCAACCTGCCATATCTTTCACAAATGCCCACAAACCCCTTGTCCTCACCACAGAGACTCCAGTCATTTTCACAGGCTGTTGATGGCTTAAGGGCATATGGCTTCGGTGATGCAATGGATGGACAAAAAATGATCCCTCATGCTGGACCACATCAACCGTTCCATACGCTATCAGCATATACTAAGACCACAGCCTCTACAAACAAGTTACAAGTGTTTCCACAGAGTTTGCCTCCTCAAGACAGACCTGACTGGACTCCTGACAGACAAAAGCTTCGAGGTATGGACAGGCACGGTCCTCAGAGAATCCCCGAACAGAAATGTAAAAGCCAGCCTT[C/A]AAGTGAAATTCTGTCTAGTCCACATCGTATATCTCAACAGCACTCTTATCCTGGTGCACAGTTTGACCTGAAAATGTGGGATGCTTATCCTGAAAAAGAGGGAGCTGCGCAACCACTGGCTGCAGTCCCTCGTGAGCATGTTGGTTCTCAACCAATTACAAATTCTGGCCCCAAAATTGCAAAAGAGGACATCTCAGATAAGGGTGCAGAAGACACAGTCAAATCCTTCCACTCATTGGCACCGGCTAGTACTAATGCTGGGCACACCGTCAAGGCAACCCAAGGCATTCAGCAGGGGCAGAGAGTAACTAAAACTGGAGCATTGGCTGAAACTAATCCCCTAATCATGAGAAGGAGAGTTAGATCTTTTATTTCCCCTATTCCTGCTAAGAGGCAGCATCAGGATGTTCCAGGTCAGCGGCCAGGATCAGCATACCACTCCCCAATAGCTCAAGCCTACCCTGAATCTAGAATTGCAACCAACAGTTGTTCTGGTAGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10342
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 1536 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2027627)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1494804 |
| GRCz11 | 3 | 1264250 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCCTCCTCAGTCCAAAGCAAAGTTTCTTCCCCCAAGAAAGGGGCGTGGCT[T/A]GAAACTTGAGGCGATTGTGCAGAAAATTACTCCTGGCGTGAGAAAAAATG
Long Flanking Sequence:
ACCACTGGCTGCAGTCCCTCGTGAGCATGTTGGTTCTCAACCAATTACAAATTCTGGCCCCAAAATTGCAAAAGAGGACATCTCAGATAAGGGTGCAGAAGACACAGTCAAATCCTTCCACTCATTGGCACCGGCTAGTACTAATGCTGGGCACACCGTCAAGGCAACCCAAGGCATTCAGCAGGGGCAGAGAGTAACTAAAACTGGAGCATTGGCTGAAACTAATCCCCTAATCATGAGAAGGAGAGTTAGATCTTTTATTTCCCCTATTCCTGCTAAGAGGCAGCATCAGGATGTTCCAGGTCAGCGGCCAGGATCAGCATACCACTCCCCAATAGCTCAAGCCTACCCTGAATCTAGAATTGCAACCAACAGTTGTTCTGGTAGTTCGGATTCTCAGGCCAAATTACCATCTCCCAAGACACCGCATTCCATATCTAGTGCTAACTCGCCTCCTCAGTCCAAAGCAAAGTTTCTTCCCCCAAGAAAGGGGCGTGGCT[T/A]GAAACTTGAGGCGATTGTGCAGAAAATTACTCCTGGCGTGAGAAAAAATGACTTCAACAATAGTAACTTGGAATCGGACTTTTCAGAAGCAGCTCATTACACCTCTGACTTGCCGGACCCAGAGAGTGGTACATCGTTTACTAGTGTTTCTCAAGGTGAGGAGACCTGTTTATCTTACCTTGAGGATTCTCATACTTTAGATGAGCTTATGCCATACAGAGCAGTTGAAGATGCATTCTCATGTGACTCTCAGTCTCTCAAAGCAGGTGCAGCTGCTTCTAGCAGCGGTGCCCTCAGAAGTTTGCCAAAAGATTTCGACTTTGGCTTAGGTACTGCTGGCTCTTCAGGGTCTTTGGGGGGTGAAAATGATAAGGATGAATTTACTTTGTTGGGACCCCTTCCACCAGCTCCTCCATTGCCTTGTCCTGTACAGGGATCACCTCCTCCATCTTCATCTGCATTGTCAGACATACAACAATTCACAAACACTTATCAACAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12722
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 1602 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2027429)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1494606 |
| GRCz11 | 3 | 1264052 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCTCAAGGTGAGGAGACCTGWTTATCTTACCTTGAGGATTCTCATACTT[T/A]AGATGASCTTATGCCATACAGAGCAGTTGAARATGCATTCTCATGTGACT
Long Flanking Sequence:
TAAAACTGGAGCATTGGCTGAAACTAATCCCCTAATCATGAGAAGGAGAGTTAGATCTTTTATTTCCCCTATTCCTGCTAAGAGGCAGCATCAGGATGTTCCAGGTCAGCGGCCAGGATCAGCATACCACTCCCCAATAGCTCAAGCCTACCCTGAATCTAGAATTGCAACCAACAGTTGTTCTGGTAGTTCGGATTCTCAGGCCAAATTACCATCTCCCAAGACACCGCATTCCATATCTAGTGCTAACTCGCCTCCTCAGTCCAAAGCAAAGTTTCTTCCCCCAAGAAAGGGGCGTGGCTTGAAACTTGAGGCGATTGTGCAGAAAATTACTCCTGGCGTGAGAAAAAATGACTTCAACAATAGTAACTTGGAATCGGACTTTTCAGAAGCAGCTCATTACACCTCTGACTTGCCGGACCCAGAGAGTGGTACATCGTTTACTAGTGTTTCTCAAGGTGAGGAGACCTGTTTATCTTACCTTGAGGATTCTCATACTT[T/A]AGATGAGCTTATGCCATACAGAGCAGTTGAAGATGCATTCTCATGTGACTCTCAGTCTCTCAAAGCAGGTGCAGCTGCTTCTAGCAGCGGTGCCCTCAGAAGTTTGCCAAAAGATTTCGACTTTGGCTTAGGTACTGCTGGCTCTTCAGGGTCTTTGGGGGGTGAAAATGATAAGGATGAATTTACTTTGTTGGGACCCCTTCCACCAGCTCCTCCATTGCCTTGTCCTGTACAGGGATCACCTCCTCCATCTTCATCTGCATTGTCAGACATACAACAATTCACAAACACTTATCAACAGCTGGAAACAAGGCGAAGTGAGCAGTCGGCTGCTAACCTGCTGAGGCAGAAGTTGCAGGAGACTGGCATGGGCTTTGACGATTACCCAGGAGGGGATTACTATGGGACCACTGCTGGCCATAGTCCTGGACATCACCTACTGTCCCGAGGTTCACAAAACCAGATGACTTCTCTCAGGTTGACAAGTCCAGACTCTAAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39970
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Nonsense | 1803 | 2354 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2026827)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1494004 |
| GRCz11 | 3 | 1263450 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCGCCCAGTCGGTAGTGTGAATAAGCAGAAACGTGCCCAAGGACAAATG[C/T]AGAATACAGCAACTAACATACCTGCAGCTCCTCTTCCCTCACCTACAGCT
Long Flanking Sequence:
GTTTGCCAAAAGATTTCGACTTTGGCTTAGGTACTGCTGGCTCTTCAGGGTCTTTGGGGGGTGAAAATGATAAGGATGAATTTACTTTGTTGGGACCCCTTCCACCAGCTCCTCCATTGCCTTGTCCTGTACAGGGATCACCTCCTCCATCTTCATCTGCATTGTCAGACATACAACAATTCACAAACACTTATCAACAGCTGGAAACAAGGCGAAGTGAGCAGTCGGCTGCTAACCTGCTGAGGCAGAAGTTGCAGGAGACTGGCATGGGCTTTGACGATTACCCAGGAGGGGATTACTATGGGACCACTGCTGGCCATAGTCCTGGACATCACCTACTGTCCCGAGGTTCACAAAACCAGATGACTTCTCTCAGGTTGACAAGTCCAGACTCTAAAGCATCAGAAAGCACTGTGCCCAAAGGTTATTTCCCATCAGGAAAGAAAAAAGGCCGCCCAGTCGGTAGTGTGAATAAGCAGAAACGTGCCCAAGGACAAATG[C/T]AGAATACAGCAACTAACATACCTGCAGCTCCTCTTCCCTCACCTACAGCTGCACCTCAGTCTGTTTCAGTCTCAAGCAATGCTGATGAAGTGCCCCGAGTACCAACACCACCTGATGAGAAACCCTGCCCATCTCTGGTCCCTCCCGATGAAACCCAAGTGGTGAAGGTGGATGCAGAAAGCGAGGAGACCCTGCCAGAGTTGGATGTAAAGCCTGTTAAACAAAAACAGAAAAAGGGGAAAGAGTGCAGCGAGACTCCTGCCTCAAGTGGCAATCAGAGAAGGAGAAGAAGAGGAATGGCTTCCAAAGAGGAGCTGGACACTCAGACGAGCAGTAGGGGAAGCATTAGTCTCAGTGGAATATTCTCTGATGCCAGGAATAGTGTTTTTGCTCCTTACGTACATGTGGAGAAAAAGATGGAAGAAATTGGGGCAGTCTGTACAATAATTAACGCAGAGGATGAAAAGTCAAAAGGTGGAGGCAAACCTGGTCACACGGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1165
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111739 | Essential Splice Site | 2289 | 2354 | 2 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 2025264)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 1492441 |
| GRCz11 | 3 | 1261887 |
KASP Assay ID:
554-1075.1 (used for ordering genotyping assays)
KASP Sequence:
AATGGATTAATTGAGACTTTCCTSTTTTCTTGTGGTTTCATTCTCTCCTC[A/T]GAGCTGCTCTCATTGTGAGATGGCGGGCTCCACCCTCGGCTGCTACAGTA
Long Flanking Sequence:
CGGCAGCCGAGCTGGAAAGTGGACTGGGTACATCAAATTTACAAGAAACAGACGCTGAAATCGCATCAAAGCAGTTGCAGGTAGAAAGTTCACAGCAAAGGCCCCAGCACAGAAAACTGACATCTCATCCACGCTTCAAAAGAAGACACAAATCCAGCGAAGATTTGCCTCGAACTGTCCCAATTAACAGCAAAGCCTCCCTGCCCTTCCAGCCTCCACCCCCAAGCCTGGATGCTCTGGGCCCCATGGCTCAGCTGGCGCAGCTCCCGCTGGTGCCTCTGGACCCTGAGGAGCTGTGGGTGCACGAGAGCTGCATGGTGTGGACCAGTGGCATATACCTGGTCAATGGGAGACTCTATGGCCTTCAGGAAGCACTGGATGGTGCTAGAGATGCGGTGAGTCCAGCTCAGCAGTTTCTGACCTATAGCATGCAGACAGTTCTGGTTGTTTAATGGATTAATTGAGACTTTCCTGTTTTCTTGTGGTTTCATTCTCTCCTC[A/T]GAGCTGCTCTCATTGTGAGATGGCGGGCTCCACCCTCGGCTGCTACAGTAAAGGCTGCACGCTGAGGTACCACTACATTTGTGCCATAGACGCAGGTGAGATACGACATTACCTGGACCTGCACTTGCCTTAATTGTGATCCGACGAGTGTCTGACTTTTAACTCTTCTCTTTTCTGTTAATCTAAAGATTGCTCTCTTAACGAAGACAACTTTTCTTTGAGGTGTCCAAAGCACAAGGTAAGTGAACAAGGCTTTGCGTTTAACATGGAAATGTTGTTAAGATAGCCGAGGGAACAGAGTTGAGCAGAACACAGAGACACACACTGAGTGTGTTGATATGACTGATAACACTGACACTAGATGCTAATATCAGTGGAGTACACACACTCAACAGATGAACATCAGACTGGAATATTGATGATGACTGAAGCTGAATGAGGGATCGAGGAGCCGGAGACGGCCACAAATACAGTAGTGGAGTGACTATTTAAGACTAAAC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |