ZMP
si:dkeyp-55c8.1
Ensembl ID:
ZFIN IDs:
Description:
calsyntenin-2 [Source:RefSeq peptide;Acc:NP_001153311]
Human Orthologue:
CLSTN2
Human Description:
calsyntenin 2 [Source:HGNC Symbol;Acc:17448]
Mouse Orthologue:
Clstn2
Mouse Description:
calsyntenin 2 Gene [Source:MGI Symbol;Acc:MGI:1929897]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19831 | Nonsense | Available for shipment | Available now |
| sa19832 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19831
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085675 | Nonsense | 245 | 937 | 5 | 17 |
Genomic Location (Zv9):
Chromosome 2 (position 39115301)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 39445466 |
| GRCz11 | 2 | 39411105 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGGGCGATGGAGAGCGTTCCAGTTCACATTGACGTCAAACCAGTGTG[C/A]AAGCCAGGCTGGCAAGGTCAGTGGATACTTAATCTGTTGACTTATGCTTT
Long Flanking Sequence:
TGCCATGAATGCAGATAACCATTACAAAGCCTTGTGAAATACAAAATACAGAGATTAGATGTAATTATTTTTATTCTAATTAGCAGCATTGCAAACGGTCTGGCAGATATAATCCATAATTGCTGAAACAGGGACACTAACGCTGTTGAAATTACATTTGTGATTGAAAACATTTGGCCAGAGTCATTGTATGGGAGCTTAATTATTGTTTAAAAGCATATGTTGTTGTGGTTGTATCTCAGGCTGGCAGCTGCAACGATTACAGATTGCTCTTTTAAGTTTTGCTTTCCATTTTCCACTTAGTGTGTTTAAATTTATTTTGCAAATGTTCTCACGTTTTGTGGCCTTGTTTTATTCATCTCTGCAGGCAACATAAGAAACACAGAGCGACTGAGCTTCGACAAACAACAGCACTATAAAATCATGGTGACGGCCTACGATTGTGGCCAGAAGAGGGCGATGGAGAGCGTTCCAGTTCACATTGACGTCAAACCAGTGTG[C/A]AAGCCAGGCTGGCAAGGTCAGTGGATACTTAATCTGTTGACTTATGCTTTTCACCATTCAAATTAGCTTCATATTCTGTAGTTTTCTAAGCAGCATCTTTTGCTAATATCACACTGTAGCGTTCATCCATTGCAATTATCTTTTTTTGTTGCTTAAGGGTTTTTTTTATTTTTTTGTGTGTGTGTGTGCTCTCTTTGACATTGCTTCTTGTGATTCACACTATTGTTCTGTGATTCTATTGGGGGAAAAGCGAGAAATTTCATTTAGCAGTTGTCATGTCATGTAGCAGTTGACCGACTATCATTGAGATGAATGGAAATGCTAACAAATCGGTTTCTCCAGATACTATTGACTTTTTTCTGGGGTTTCAAGGCTGCGTCTTTTTCAAAAGAAGTCTTTTGTCTTTTTTTCACAAATGTCTCAGATACCCTTCGGCAATGGTTTTCAACATGTTGAAGGTCACTGAGGGTTTTTTGGAGGTCAACTGTTTGTATTCATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19832
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085675 | Essential Splice Site | 399 | 937 | 8 | 17 |
Genomic Location (Zv9):
Chromosome 2 (position 39147346)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 39477511 |
| GRCz11 | 2 | 39443150 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTAGTATTTGACGCATGTACAATAATGCTTCTCTGTGTTTTCTTTTCGC[A/T]GAGATGAACAGACATCATTATTCTCTGTATGTCCACAACTGCCGTCTGGT
Long Flanking Sequence:
TATTCAAAGTAAAATCTAATTTATTAAACAGTTTCACATGATCTGTCAGAAATCATTCTCTTACCAAATTCACAAGAACATTTTGATTAACAATAGAATGTTCTTTTTCTGACTATTTAAAAGTGTTAACTGTGGATTTTGGCCAGTTTAATAGGTTCCTGCTGAAATAAAAGCCTTAGTCACTATAAAATTACAGCTTTCAAACTTCACATTTTAAGAAATGCCTAGATTTTGCCTAAATTAGTCAGTCCATTCCAAGCTTAAAAATGACTTCATTTGGTTTTTCTGCAGAGCAGTACTTGTTAAATTCCTTCTGTGTCCATACGTTCCTTCTATAATCTATAAATGGAAATCTTAAATCAACATCTACCTCTTACTTTGCCAACCATTCAGAGTGATTTGTAGAAAATCCTTTTAGCAGTTCTAAAAATAATCTATGTCACCTATAAAATTAGTATTTGACGCATGTACAATAATGCTTCTCTGTGTTTTCTTTTCGC[A/T]GAGATGAACAGACATCATTATTCTCTGTATGTCCACAACTGCCGTCTGGTGTTTCTTCTGAGGCGCGACTTCATTCAGCTGGACTCCTTCAGACCGGCCGAATTTCACTGGAGACTGGAACAGGTGAGCCACACATTCATGTCAACTTCACATGCAGCCCTTGGATAAACAGGACGGGAAAAATGCCACACGGATCGGGCTCCATTTATAGTAATCACTTGTGAAGTGAAGTTCGCTCTGTATAATTTTCAATTACCTGTTTCTGAATTATTCATTATCCGTGTGACTGATCTTTCTGTTGCGATGAGTGATCTGTCACTGGTGAAATGATTATTATCAGAAGGACAAATTGGAAAGCCGACGCAAAAGACAGCGCTCACGTTTTCTCTCCCAGCGCTTATTTGCTTCATAATCAGCCTAGTTTTTGTTTGGAAACACCTTGATTTTCTCATATTTTCAGCATTTCCCTTGGCTAACGGAGAGTGCGGACTAATCTCTTG
Associated Phenotype:
Not determined