ZMP

cdh6

Ensembl ID:

ENSDARG00000014522

ZFIN ID:

ZDB-GENE-050320-92

Description:

cadherin-6 [Source:RefSeq peptide;Acc:NP_001013538]

Human Orthologues:

CDH10, CDH6, CDH9

Human Descriptions:

cadherin 10, type 2 (T2-cadherin) [Source:HGNC Symbol;Acc:1749]
cadherin 6, type 2, K-cadherin (fetal kidney) [Source:HGNC Symbol;Acc:1765]
cadherin 9, type 2 (T1-cadherin) [Source:HGNC Symbol;Acc:1768]

Mouse Orthologues:

Cdh10, Cdh6, Cdh9

Mouse Descriptions:

cadherin 10 Gene [Source:MGI Symbol;Acc:MGI:107436]
cadherin 6 Gene [Source:MGI Symbol;Acc:MGI:107435]
cadherin 9 Gene [Source:MGI Symbol;Acc:MGI:107433]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa19781	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa19781

Status:

Available for shipment
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Availability:

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Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000013638	Nonsense	241	794	5	12
ENSDART00000131506	Nonsense	241	794	4	11

Genomic Location (Zv9):

Chromosome 2 (position 28245094)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	28421579
GRCz11	2	28077215

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCAAAGGGAGCACTACCAAGTGGTGATCGAAGCCAAGGACATGGCCGGC[C/T]AGAAGGGAGGCTTAATAGGCTCCACCACAGTCAACATTAGCCTTACCGAT

Long Flanking Sequence:

ATTTATTATGATTTTAAAAATGAGTGTAATTTAAAAGATATATTCTGCATACGTATGTCATTATGTATATTACACCACTTGAAAAAAAGCCAAGCAAGTCCAACACCTCCTTTCTCAGAAATTGCTTTATATCACATTTCAAATTGCTTTAGCTTGTAAAACACCAGTTTTAATAATCCAAGGTCTTGTTTCTTCTGAACCTGCAGCGATCTCTCAATCAGCAGCTGCCGCCTGTAATAATCTCTGCGGCAAAATGTCAGTCTCAATGCATGTACGCAATTAGTTCTGCACTGTTCAAACACAACAGAGACTCAGCTGCCACTGCGCTTTGCCGTCGTCCATTTCCTAGAATAAAGAACTTGGCCGCACTGAATGTTAACGAATTAAAATAAGGCATCTTTCCCCCAGGAATAATCCGGACTGCTTTGGGACCTACCGATATGGATAGAGAGCAAAGGGAGCACTACCAAGTGGTGATCGAAGCCAAGGACATGGCCGGC[C/T]AGAAGGGAGGCTTAATAGGCTCCACCACAGTCAACATTAGCCTTACCGATATCAACGACAACGCCCCACACTTCAAGCAGGGTGAGCATGCATTCAGTAGATACAAATATAAATACTGTATGTAAATATCACCAAACTGACGTTTGCGCAAGACTTTAGTTCCATAATCCCAATAGTTCCCGTTAAGCTCACTTATATAATAAATAACAAGAATACAAAGACTTCAAATAACAATGAAAGATACACGTTTTTATCGTTGTGCGAAACAAAAATGGTTTGGGGCAAAGCTTAAGCAACTGCGTGAGGTCTGTGTGTTAATCCTGATTAAATGGACAGTGTGGGCTCAGCTCACTTACTCTTTTGTGTTTCCGCTAATATAATCTATTCTTTTAGCCTGCATGCAAATAGAAAACGCTCAGAGTTTCTGCCATGTCAATGTGAGTAATGCAGAATACAAGCACAGAGTGGATTTATAGCAGGCAGTACAATATCAGCCTCGC

Associated Phenotype:

Not determined