Busch Lab

ZMP

chd7

Ensembl ID:
ENSDARG00000075211
ZFIN ID:
ZDB-GENE-070912-179
Description:
LOC569471 protein [Source:UniProtKB/TrEMBL;Acc:A7E291]
Human Orthologue:
CHD7
Human Description:
chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:20626]
Mouse Orthologue:
Chd7
Mouse Description:
chromodomain helicase DNA binding protein 7 Gene [Source:MGI Symbol;Acc:MGI:2444748]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa19733 Nonsense Available for shipment Available now
sa19732 Nonsense Available for shipment Available now
sa11593 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa19733
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016208 Nonsense 377 3140 1 37
ENSDART00000114089 Nonsense 377 653 2 3
ENSDART00000121586 None None 62 None 2
ENSDART00000135230 Nonsense 377 3140 2 38

The following transcripts of ENSDARG00000075211 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 21603307)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 22148722
GRCz11 2 21806784
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTACCCTGCTCCGGCAGGGCCTCAGCGCTACCCTACACCTGGGGGTCAA[C/T]AGGGACCATTGCACCAGCAGCCCATTCATGTGAACCAAATCAATACCCAG
Long Flanking Sequence:
CACAAGGCCTCCCTCAGGAAGCCAATCATTTTTTGGGTCACGTGGGTATGACTCAGAATCCTGGCATGTCGGGACCCCCCATACGTCACCTAGCACAACCTTCTCAGCAGCATCAGCAGCCCAATCAGCAGTTTCTCCACAGGCCTGGCCAGGGTCCGGTTCATCCAGATTCTGTTGCGAGCCACAACCCCCAGTTCCCACAAAGCCCTTCACGACAGCAACAGCAGCAGCAGCAAGTGATGGGTGGAAGACCCCACCAAAACATGGGATTTAACATGCACAACCAGCAAGTTCCTTCCAACACCGTAAACAGCTCAGGGCAGTACCCTCCCTATTCTTCATATGGCAACCTTAATCAGGGATTAGCCAACACATCAGGGATGAGTCCCAACTTGAGCCTTACCACCAGCAGTAACAGCAACCCTAATGCTCCTGTGACCCAGGTGCAGCGCTACCCTGCTCCGGCAGGGCCTCAGCGCTACCCTACACCTGGGGGTCAA[C/T]AGGGACCATTGCACCAGCAGCCCATTCATGTGAACCAAATCAATACCCAGCCTATGCATCCAGCTCAGAACCAGGCTACAGCCCAGCCGAAGCTGCAGCAACATCTACCACCTCCACCTCAGGGATCATACTCCTCCCCTCCTTCCATGTCGCCCATGAGGAATTTAGCCACCCCTGCAGGCACTCCACCTCCCCAGCAGGTACGCCCTCCCAGTGCAGGTTTGGCTACCGATGTGGGTGGTTACCCCGGAGTACCACATCAGTCTCAAGGCCCAATGGCTCATGCCCAGAGGGGAGCTGGCCCAATGAACGCAGCACAGCCACTTCCCCACCAGCAGCTGCCATCACATTCTACACACCCTCATCCTCCAACAACCCAGATGTACGCTGCTTTGTCACCCAATCACAGAGCTACAGCTGCACAAGGAAGATCTTCAACAACACCGGGTGGAAACCACACAGAACCACCAGGCCCACAGGACCAGAGGCTACATGCCCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19732
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016208 Nonsense 1449 3140 17 37
ENSDART00000114089 None None 653 None 3
ENSDART00000121586 None None 62 None 2
ENSDART00000135230 Nonsense 1449 3140 18 38

The following transcripts of ENSDARG00000075211 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 21577023)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 22122438
GRCz11 2 21780500
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTCCTCAAAGGCGGTGTATGTGACCGGTTTGTGCTGTTGCCTCCAGGCA[C/T]AAGCTCGATGCCACAGGATAGGACAGAGCAAGTCTGTGAAGATTTACCGC
Long Flanking Sequence:
TATCATTGTAAAGGATATTAGCAAATAGATGTTTATAGTTAACCTACGGCCTATTTCCTTCATTGTAGGTATCCATATGAGCGTATAGATGGCAGAGTTCGAGGGAATCTCCGCCAGGCAGCTATTGACCGCTTCTCTCGACCAGACTCTGACCGCTTTGTATTCCTGCTGTGCACAAGGGCTGGTGGCTTGGGTATTAACCTAACTGCAGCTGATACATGTATTATATTTGATTCTGACTGGAACCCTCAAAATGACCTGCAGGTAAGCATGCTAGTTTCATGATCACATTATTGCAGTTGGAAGTAAAATTGTGCTGGACTTTCAGTGGAACTTTTTTTTTTTTTTTTTTAAATGTTCTTTTTTTTATAATCTTATGACTGCATTTCAGCTAGATTCAATTGAAAATACTCTATCACATTGTGCAACCTTAGTGCTTTATAGTGTTTGAGTCCTCAAAGGCGGTGTATGTGACCGGTTTGTGCTGTTGCCTCCAGGCA[C/T]AAGCTCGATGCCACAGGATAGGACAGAGCAAGTCTGTGAAGATTTACCGCCTGATCACCAGAAACTCCTACGAAAGAGAGATGTTTGACAAGGCCAGCTTGAAGTTAGGACTGGACAAGGCTGTGCTTCAGTCCATGAGCGGCAGGGAGAATGCTGCCAATGGGGTATGAACTGCACACAGCGCCACCATTTTGTGGTGTTTCACTGAAACCGTATTCCAGATGGTTCATTAATCAAACATACTTTGCACATGTTGGCAGTCAGTGGAAAGACCTCTAATTCCTGTGCCCTGAGACTTATTTTCCTTTTTACCATGTGCCTAAATTTGTCCACCCTGTAAAATACCCAAGATGAAAAAGTCAAATTTATTGAGATTTGTATTTTGTGAAATGAATACATTCCTCTCTCTTTATTTTAGGTTCAGCAGCTCTCTAAAAAGGAGATTGAGGATCTCCTGCGTAAAGGAGCATATGGAGCTCTAATGGAAGAGGAGGATGAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11593
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016208 Nonsense 1541 3140 18 37
ENSDART00000114089 None None 653 None 3
ENSDART00000121586 None None 62 None 2
ENSDART00000135230 Nonsense 1541 3140 19 38

The following transcripts of ENSDARG00000075211 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 21576493)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 22121908
GRCz11 2 21779970
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAATGGAAGAGGAGGATGAGGGATCCAAGTTCTGTGAAGAAGACATTGAT[C/T]AGATTTTGCAGAGAMGTACACAGACCAKTACAATTGAATCAGAAGGCAAA
Long Flanking Sequence:
AAGTCTGTGAAGATTTACCGCCTGATCACCAGAAACTCCTACGAAAGAGAGATGTTTGACAAGGCCAGCTTGAAGTTAGGACTGGACAAGGCTGTGCTTCAGTCCATGAGCGGCAGGGAGAATGCTGCCAATGGGGTATGAACTGCACACAGCGCCACCATTTTGTGGTGTTTCACTGAAACCGTATTCCAGATGGTTCATTAATCAAACATACTTTGCACATGTTGGCAGTCAGTGGAAAGACCTCTAATTCCTGTGCCCTGAGACTTATTTTCCTTTTTACCATGTGCCTAAATTTGTCCACCCTGTAAAATACCCAAGATGAAAAAGTCAAATTTATTGAGATTTGTATTTTGTGAAATGAATACATTCCTCTCTCTTTATTTTAGGTTCAGCAGCTCTCTAAAAAGGAGATTGAGGATCTCCTGCGTAAAGGAGCATATGGAGCTCTAATGGAAGAGGAGGATGAGGGATCCAAGTTCTGTGAAGAAGACATTGAT[C/T]AGATTTTGCAGAGACGTACACAGACCATTACAATTGAATCAGAAGGCAAAGGCTCAACATTTGCTAAGGTGAAGACATCACCCTCCCCCTTGGCTGTTGTATTAATGATTTTAACCCAAAAAATTGACCCATTCATCAATGTTATTGCATAATTGGCTTTATAGAAGCATACTCCCCATTTAATCTTGCTCCTAAAATAGAGCAACCTAAAGGGTAAGTGTCTCTGATCTGACCATTTATATAATTTTTTTCCCTTACCAGGCAAGTTTTGTGTCCGCTGGGAACAGAACCGACATTTCTCTGGAGGACCCAGATTTCTGGCAGAAATGGGCAAAAAAAGCAGAGCTGGACCTGGATGCGATCAATGGCAGGGTAAGCTGTGACTTAACAGAGAAAAAGGAGCTCTCTTGTGCCGTGTCTCGCAGGAGATGCTGCATGAATTGAGGCACTAATCTATAGCACTTCTCTCTTGTGTAATTGTGCAGAGCACTTACGGCTGA
Associated Phenotype:
Not determined