ZMP
chd7
Ensembl ID:
ZFIN ID:
Description:
LOC569471 protein [Source:UniProtKB/TrEMBL;Acc:A7E291]
Human Orthologue:
CHD7
Human Description:
chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:20626]
Mouse Orthologue:
Chd7
Mouse Description:
chromodomain helicase DNA binding protein 7 Gene [Source:MGI Symbol;Acc:MGI:2444748]
Alleles
There are 10 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa19733 | Nonsense | Available for shipment | Available now |
sa19732 | Nonsense | Available for shipment | Available now |
sa11593 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19733
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016208 | Nonsense | 377 | 3140 | 1 | 37 |
ENSDART00000114089 | Nonsense | 377 | 653 | 2 | 3 |
ENSDART00000121586 | None | None | 62 | None | 2 |
ENSDART00000135230 | Nonsense | 377 | 3140 | 2 | 38 |
The following transcripts of ENSDARG00000075211 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 21603307)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 22148722 |
GRCz11 | 2 | 21806784 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTACCCTGCTCCGGCAGGGCCTCAGCGCTACCCTACACCTGGGGGTCAA[C/T]AGGGACCATTGCACCAGCAGCCCATTCATGTGAACCAAATCAATACCCAG
Long Flanking Sequence:
CACAAGGCCTCCCTCAGGAAGCCAATCATTTTTTGGGTCACGTGGGTATGACTCAGAATCCTGGCATGTCGGGACCCCCCATACGTCACCTAGCACAACCTTCTCAGCAGCATCAGCAGCCCAATCAGCAGTTTCTCCACAGGCCTGGCCAGGGTCCGGTTCATCCAGATTCTGTTGCGAGCCACAACCCCCAGTTCCCACAAAGCCCTTCACGACAGCAACAGCAGCAGCAGCAAGTGATGGGTGGAAGACCCCACCAAAACATGGGATTTAACATGCACAACCAGCAAGTTCCTTCCAACACCGTAAACAGCTCAGGGCAGTACCCTCCCTATTCTTCATATGGCAACCTTAATCAGGGATTAGCCAACACATCAGGGATGAGTCCCAACTTGAGCCTTACCACCAGCAGTAACAGCAACCCTAATGCTCCTGTGACCCAGGTGCAGCGCTACCCTGCTCCGGCAGGGCCTCAGCGCTACCCTACACCTGGGGGTCAA[C/T]AGGGACCATTGCACCAGCAGCCCATTCATGTGAACCAAATCAATACCCAGCCTATGCATCCAGCTCAGAACCAGGCTACAGCCCAGCCGAAGCTGCAGCAACATCTACCACCTCCACCTCAGGGATCATACTCCTCCCCTCCTTCCATGTCGCCCATGAGGAATTTAGCCACCCCTGCAGGCACTCCACCTCCCCAGCAGGTACGCCCTCCCAGTGCAGGTTTGGCTACCGATGTGGGTGGTTACCCCGGAGTACCACATCAGTCTCAAGGCCCAATGGCTCATGCCCAGAGGGGAGCTGGCCCAATGAACGCAGCACAGCCACTTCCCCACCAGCAGCTGCCATCACATTCTACACACCCTCATCCTCCAACAACCCAGATGTACGCTGCTTTGTCACCCAATCACAGAGCTACAGCTGCACAAGGAAGATCTTCAACAACACCGGGTGGAAACCACACAGAACCACCAGGCCCACAGGACCAGAGGCTACATGCCCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19732
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016208 | Nonsense | 1449 | 3140 | 17 | 37 |
ENSDART00000114089 | None | None | 653 | None | 3 |
ENSDART00000121586 | None | None | 62 | None | 2 |
ENSDART00000135230 | Nonsense | 1449 | 3140 | 18 | 38 |
The following transcripts of ENSDARG00000075211 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 21577023)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 22122438 |
GRCz11 | 2 | 21780500 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTCCTCAAAGGCGGTGTATGTGACCGGTTTGTGCTGTTGCCTCCAGGCA[C/T]AAGCTCGATGCCACAGGATAGGACAGAGCAAGTCTGTGAAGATTTACCGC
Long Flanking Sequence:
TATCATTGTAAAGGATATTAGCAAATAGATGTTTATAGTTAACCTACGGCCTATTTCCTTCATTGTAGGTATCCATATGAGCGTATAGATGGCAGAGTTCGAGGGAATCTCCGCCAGGCAGCTATTGACCGCTTCTCTCGACCAGACTCTGACCGCTTTGTATTCCTGCTGTGCACAAGGGCTGGTGGCTTGGGTATTAACCTAACTGCAGCTGATACATGTATTATATTTGATTCTGACTGGAACCCTCAAAATGACCTGCAGGTAAGCATGCTAGTTTCATGATCACATTATTGCAGTTGGAAGTAAAATTGTGCTGGACTTTCAGTGGAACTTTTTTTTTTTTTTTTTTAAATGTTCTTTTTTTTATAATCTTATGACTGCATTTCAGCTAGATTCAATTGAAAATACTCTATCACATTGTGCAACCTTAGTGCTTTATAGTGTTTGAGTCCTCAAAGGCGGTGTATGTGACCGGTTTGTGCTGTTGCCTCCAGGCA[C/T]AAGCTCGATGCCACAGGATAGGACAGAGCAAGTCTGTGAAGATTTACCGCCTGATCACCAGAAACTCCTACGAAAGAGAGATGTTTGACAAGGCCAGCTTGAAGTTAGGACTGGACAAGGCTGTGCTTCAGTCCATGAGCGGCAGGGAGAATGCTGCCAATGGGGTATGAACTGCACACAGCGCCACCATTTTGTGGTGTTTCACTGAAACCGTATTCCAGATGGTTCATTAATCAAACATACTTTGCACATGTTGGCAGTCAGTGGAAAGACCTCTAATTCCTGTGCCCTGAGACTTATTTTCCTTTTTACCATGTGCCTAAATTTGTCCACCCTGTAAAATACCCAAGATGAAAAAGTCAAATTTATTGAGATTTGTATTTTGTGAAATGAATACATTCCTCTCTCTTTATTTTAGGTTCAGCAGCTCTCTAAAAAGGAGATTGAGGATCTCCTGCGTAAAGGAGCATATGGAGCTCTAATGGAAGAGGAGGATGAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11593
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016208 | Nonsense | 1541 | 3140 | 18 | 37 |
ENSDART00000114089 | None | None | 653 | None | 3 |
ENSDART00000121586 | None | None | 62 | None | 2 |
ENSDART00000135230 | Nonsense | 1541 | 3140 | 19 | 38 |
The following transcripts of ENSDARG00000075211 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 21576493)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 22121908 |
GRCz11 | 2 | 21779970 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAATGGAAGAGGAGGATGAGGGATCCAAGTTCTGTGAAGAAGACATTGAT[C/T]AGATTTTGCAGAGAMGTACACAGACCAKTACAATTGAATCAGAAGGCAAA
Long Flanking Sequence:
AAGTCTGTGAAGATTTACCGCCTGATCACCAGAAACTCCTACGAAAGAGAGATGTTTGACAAGGCCAGCTTGAAGTTAGGACTGGACAAGGCTGTGCTTCAGTCCATGAGCGGCAGGGAGAATGCTGCCAATGGGGTATGAACTGCACACAGCGCCACCATTTTGTGGTGTTTCACTGAAACCGTATTCCAGATGGTTCATTAATCAAACATACTTTGCACATGTTGGCAGTCAGTGGAAAGACCTCTAATTCCTGTGCCCTGAGACTTATTTTCCTTTTTACCATGTGCCTAAATTTGTCCACCCTGTAAAATACCCAAGATGAAAAAGTCAAATTTATTGAGATTTGTATTTTGTGAAATGAATACATTCCTCTCTCTTTATTTTAGGTTCAGCAGCTCTCTAAAAAGGAGATTGAGGATCTCCTGCGTAAAGGAGCATATGGAGCTCTAATGGAAGAGGAGGATGAGGGATCCAAGTTCTGTGAAGAAGACATTGAT[C/T]AGATTTTGCAGAGACGTACACAGACCATTACAATTGAATCAGAAGGCAAAGGCTCAACATTTGCTAAGGTGAAGACATCACCCTCCCCCTTGGCTGTTGTATTAATGATTTTAACCCAAAAAATTGACCCATTCATCAATGTTATTGCATAATTGGCTTTATAGAAGCATACTCCCCATTTAATCTTGCTCCTAAAATAGAGCAACCTAAAGGGTAAGTGTCTCTGATCTGACCATTTATATAATTTTTTTCCCTTACCAGGCAAGTTTTGTGTCCGCTGGGAACAGAACCGACATTTCTCTGGAGGACCCAGATTTCTGGCAGAAATGGGCAAAAAAAGCAGAGCTGGACCTGGATGCGATCAATGGCAGGGTAAGCTGTGACTTAACAGAGAAAAAGGAGCTCTCTTGTGCCGTGTCTCGCAGGAGATGCTGCATGAATTGAGGCACTAATCTATAGCACTTCTCTCTTGTGTAATTGTGCAGAGCACTTACGGCTGA
Associated Phenotype:
Not determined