ZMP
cnn1a
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC567396 [Source:RefSeq peptide;Acc:NP_001139070]
Human Orthologue:
CNN1
Human Description:
calponin 1, basic, smooth muscle [Source:HGNC Symbol;Acc:2155]
Mouse Orthologue:
Cnn1
Mouse Description:
calponin 1 Gene [Source:MGI Symbol;Acc:MGI:104979]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32772 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa1965 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa32772
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000010236 | Essential Splice Site | 21 | 287 | 2 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 52716031)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51586980 |
| GRCz11 | 1 | 52221105 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAATCATTATTCTTAATCATTATTTTATTATATTGCCCTTGATATGACA[G/A]CTGGCACAGAAATATGACCCTCAGACGGAGGAGGACCTGAGGATGTGGGT
Long Flanking Sequence:
TTATTAATATGAACTATTTTATAAAAATTATTTTATTAATATCAATAATTATATTTATAAATGTCATTCGTTTTTAATTTTAATAAAATATATTTGATATTATTAACTTGTTCAAAGAATAATTGAATGATTGAAAAGGATGATTGATATTATCTCAGTGGCTCAGTGGTTAGCACTGTCACCTCACAGCAAGAAGGTCTCTGGTTCGAGTCTCGGCTGGGCCCGTTGGCTCTTCTGTGTGGAGTTTGCATGTTCTGTGTGTGTGAATGAATGTGTATGGATGTTCTCAGTACTGGACTGTAGCTGGAAGGGCATCTGCTTTGTAAAACATGTTGAATAAGTTAATTCCGCTGTGAATCCCTGATAAACCCGAAGGAAAATGAATTAAGGAAAATAATAATTATTATTACTATTAATAATATTAATAACATCAACAATATTATTATTTTTAAAATCATTATTCTTAATCATTATTTTATTATATTGCCCTTGATATGACA[G/A]CTGGCACAGAAATATGACCCTCAGACGGAGGAGGACCTGAGGATGTGGGTCCAGGAGATCACAGGACGAACACTTGCAGAAAACTTCATGGAGGGGCTGAAAGACGGCGTGATCCTGTGCGAGTGAGTAAAGTAACACAAAACACAACGTGAACACATTTTTTTTTCAGCTTGCTCTAAGTGCCCCTATATGGTGTTTCTCCACTACAGGCTGATCAACAAACTACAACCCGGATCCGTCCCGAAGGTCAATCATTCAACCCTAAACTGGCACAAGGTAGATATAATGTTTGAAATGAGACTTCACATGATGTTTAAAGAGCTTTCAGGGTATAAAATGGATATTTGCTGCAGCTGATGTTCTCTAAAGCCATTAGCGCATGTATTGCATGCTTGTGAATAGCAGGTATTAGCTGTTTAGCTCAAAGAAATGCTGAGAATGTATGATGAGCGCAGAGGAATTGAGCTTTTAGCGTTAAAACGAAGCCCAAAAACTGATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1965
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000010236 | Nonsense | 43 | 287 | 2 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 52715964)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51586913 |
| GRCz11 | 1 | 52221038 |
KASP Assay ID:
554-2451.1 (used for ordering genotyping assays)
KASP Sequence:
ACCCTCAGACGGAGGAGGACCTGAGGATGTGGGTCCAGGAGATCACAGGA[C/T]GAACACTTGCAGAAAACTTCATGGAGGGGCTGAARGACGGYGTGATCCTG
Long Flanking Sequence:
TCGTTTTTAATTTTAATAAAATATATTTGATATTATTAACTTGTTCAAAGAATAATTGAATGATTGAAAAGGATGATTGATATTATCTCAGTGGCTCAGTGGTTAGCACTGTCACCTCACAGCAAGAAGGTCTCTGGTTCGAGTCTCGGCTGGGCCCGTTGGCTCTTCTGTGTGGAGTTTGCATGTTCTGTGTGTGTGAATGAATGTGTATGGATGTTCTCAGTACTGGACTGTAGCTGGAAGGGCATCTGCTTTGTAAAACATGTTGAATAAGTTAATTCCGCTGTGAATCCCTGATAAACCCGAAGGAAAATGAATTAAGGAAAATAATAATTATTATTACTATTAATAATATTAATAACATCAACAATATTATTATTTTTAAAATCATTATTCTTAATCATTATTTTATTATATTGCCCTTGATATGACAGCTGGCACAGAAATATGACCCTCAGACGGAGGAGGACCTGAGGATGTGGGTCCAGGAGATCACAGGA[C/T]GAACACTTGCAGAAAACTTCATGGAGGGGCTGAAAGACGGCGTGATCCTGTGCGAGTGAGTAAAGTAACACAAAACACAACGTGAACACATTTTTTTTTCAGCTTGCTCTAAGTGCCCCTATATGGTGTTTCTCCACTACAGGCTGATCAACAAACTACAACCCGGATCCGTCCCGAAGGTCAATCATTCAACCCTAAACTGGCACAAGGTAGATATAATGTTTGAAATGAGACTTCACATGATGTTTAAAGAGCTTTCAGGGTATAAAATGGATATTTGCTGCAGCTGATGTTCTCTAAAGCCATTAGCGCATGTATTGCATGCTTGTGAATAGCAGGTATTAGCTGTTTAGCTCAAAGAAATGCTGAGAATGTATGATGAGCGCAGAGGAATTGAGCTTTTAGCGTTAAAACGAAGCCCAAAAACTGATTTACTGCCTGAGAAGCAGTCTGGTTATTTTTGGCACCGTCAAAGTAGTTTTTGATTTAAAGCCCAAATA
Associated Phenotype:
Not determined