ZMP
ddx39a
Ensembl ID:
ZFIN ID:
Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a [Source:RefSeq peptide;Acc:NP_956015]
Human Orthologue:
DDX39
Human Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:HGNC Symbol;Acc:17821]
Mouse Orthologue:
Ddx39
Mouse Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 Gene [Source:MGI Symbol;Acc:MGI:1915528]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19553 | Nonsense | Available for shipment | Available now |
| sa38287 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa19553
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000014727 | Nonsense | 26 | 427 | 2 | 10 |
| ENSDART00000101224 | None | None | 346 | 2 | 11 |
| ENSDART00000145757 | Nonsense | 26 | 244 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 45668691)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 44511910 |
| GRCz11 | 1 | 45213213 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGTTGGACTATGAGGAAGATGAGGAGCCACAGCCCACTGTAGACAGC[G/T]GAGCCACCACTGGCAAGAAGGAGGTTAAAGGGTCTTACGTGTCCATCCAC
Long Flanking Sequence:
TTTAAAATATCTTATTGTGTGTATTTTGTAACCAATCGAGGGTGAGTAAATTACATTTTTGGGTGAGCTATCCCTTAAGGACTGTTTAGACCTTTGCTCTAGCAAACAAATTCTGATGAAGAACATCTCTTTTGTCCAATGTGATCACAAGGTGCTGCAAGAGCTTTAATGTAGTGTTCTATCTATTTTGTTGTAAGCCTTAATTGTGACTAACAACAACTAAGCTGTATGTTGAATCTTTGGAGTGTTGCAGATTCAACTCTGTGTCTGCCCCCTTTAACTTACTATTTAGACATAACAATGATGTTGGATGTCATTTGTTATTCCTTTAAGTCTTAAATTTACCATCATAAATTCTGCAGAAATGCATGTATTCTTAATTGATATTCCTGTCTTAACGCTGTCATTTATTTTTTGAAGTTACCATGGCCGAGAACGATGTTGAAAATGAGCTGTTGGACTATGAGGAAGATGAGGAGCCACAGCCCACTGTAGACAGC[G/T]GAGCCACCACTGGCAAGAAGGAGGTTAAAGGGTCTTACGTGTCCATCCACAGCTCCGGATTCCGAGATTTCCTCCTGAAACCAGAGTTGCTCCGCGCTATCGTTGACTGTGGCTTTGAACATCCTTCTGAGGGTAAGAATATATATTTCGTTTCGTTGTTTTTGTAGTTTAAGCTAGAAAATATGTTCTTTCAGTTTTACACAGATATATTGTAGTATAGAGCTGGACATAAATTAATCACATCCTAAATAAAAGTTTTGTAAGTGTACTGTCGCTGTGTATATACATACATGCATGCATATATTTGACAATGTTTGTTAATATTAAAATATAAATTCTACATGTATGTGATACAATATAAATGTAAATATTTTGGTAACAAATTATTTTGAATAATTATACAACCCCAAGTCGAAACAAACTTTTCTTTTGGGGTGTGATTAATCTTTCCCAGCACTAATGTTTTGAGATTGATATATTTACATGTATTAAGCCACTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38287
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000014727 | Nonsense | 328 | 427 | 8 | 10 |
| ENSDART00000101224 | Nonsense | 247 | 346 | 9 | 11 |
| ENSDART00000145757 | None | None | 244 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 45663921)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 44507140 |
| GRCz11 | 1 | 45208443 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGTTGGCCGAGAAATGCAAATTCTCCTTCTCTGTCTTGCAGGTTATCT[C/T]GATATCAGCAGTTTAAAGACTTTCAGCGGCGGATTCTGGTGGCTACGAAT
Long Flanking Sequence:
GTTTGACCTGCTCGATGTTCTGGAGTTTAACCAGGTGACTGTCGTGTCATTAGATTTTATGGTTGGAGACTCTGAATCTAAGAGCTTGTTAACTTAAATAGTTTGTTTGGGTGCATTAGGTGGTGATATTCGTCAAGTCTGTTCCACGCTGCGTGGCTCTGTCTCAGTTGCTGGTTGAACAGAATTTCCCTGCCATTGCGATCCACAGAGGAATGACTCAGGAAGAAAGGTAAGGCAGTTGGATGAAAAAAGGGTCAGTGTGAGCACATTTCAAGAAAATCAAGCTGTTGCTCCATCAAATTTAACAAAAGGAAATAATAAGCTAACATAAATCTGCACACTCCCACTATATTTCTCTTAAAAACATTTAAGACAATCAGACTATGTAGGCAATAGTGGAAGTGAGCAGATTTAGTTTATTAAGGTAATTGTTCATCACATGATCTTGAAAAGGTTGGCCGAGAAATGCAAATTCTCCTTCTCTGTCTTGCAGGTTATCT[C/T]GATATCAGCAGTTTAAAGACTTTCAGCGGCGGATTCTGGTGGCTACGAATCTGTTTGGTCGAGGGATGGATATTGAGCGTGTTAATATTGTCTTCAACTATGACATGCCTGAGGATTCAGACACATACCTTCACAGGGTATATATGCATGATGCGTGTGGCATTTTTACCTTTCATTAAACTTGAGAATTGCTCAAAGTTGTTGAACGTTTCCATTTTCCTTTGTTCATTCAGGTTGCTCGTGCTGGCAGGTTTGGCACAAAAGGTTTGGCCGTCACCTTTGTGTCAGATGAGACCGATGCGAAGATCCTGAATGATGTGCAGGACCGCTTTGAAGTCAACGTGGCCGAGTTGCCTGAGGAAATCGACATCTCCACCTACAGTAAGAAATTGATTAAACACTCAAGCTCTCTAAATATGTTGATTTTATGTTTGTTTAATTGATTATTTCCACTGAGAAGGACAGTAACAACCGACTAAAAACAGATCTGCTGTTAAAAA
Associated Phenotype:
Not determined