ZMP

pan2

Ensembl ID:

ENSDARG00000074675

ZFIN ID:

ZDB-GENE-030131-3113

Human Orthologue:

PAN2

Human Description:

PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20074]

Mouse Orthologue:

Pan2

Mouse Description:

PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:191

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa45006	Splice Site, Nonsense	Mutation detected in F1 DNA	Not yet available
sa1948	Essential Splice Site	Available for shipment	Available now
sa45007	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa45006

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111836	Splice Site, Nonsense	423	1215	7	26
ENSDART00000140351	Splice Site, Nonsense	424	1202	8	26

Genomic Location (Zv9):

Chromosome 23 (position 32232152)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	32067042
GRCz11	23	31993573

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CATTTTTTGGGGATGTTTATGGATGTTGATGTGTTTGTTTCACTGTCAGA[C/T]GAGCGCCTCCAGTAGACCCAGAGATTCTGAGGACAATGAAAACTGTGGGA

Long Flanking Sequence:

GTAAAGTGTGATTAGATAAACTGCTATTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATATGTAATTTTCTTGTGTAGTGCCTATTTTTGTAAAAAAAATCTGGATTGTTCATGCATAAATACATATTTTCATAATGTGCACGATATATTCATTCCATATTTCATTTCTGAACATACCTGTGTGTCAGAGGCTTATTGTGTAATACTGCCCCCTGCAGTACATTTCTGTAAATGTGCTCAATCTATTATGATATGCTTTTGGTATTTTCATTTAGTAGAGATGTATATTTATTGTAATTTTTCTTGCATCTCTTTTCCATGCCAGTTTTCTTTACACAGTTTTTGGACAGTAAATCTCTTAACAAATGACATTTTTTGGGGATGTTTATGGATGTTGATGTGTTTGTTTCACTGTCAGA[C/T]GAGCGCCTCCAGTAGACCCAGAGATTCTGAGGACAATGAAAACTGTGGGATTTATTGGATACGCACCAAATCCTAGAACCCGTCCCAGAAACCAGGTAATTTTTCAAAATACATGGCAAGGCAAGTTTCATACACAATGGTATAAGAATATACCATTAAATATAATAAAAAATATAAACAAATAAAAAATGATTCAAAACAGATTAAAATGTGTTAAAATAGGTTTTAAAGGAGTAAAAAAAGAGAAAGACATAATAGTGTGATCTGTCAGACGTAGCACAGTGCTCATTCAGTAAAAGCACAGCTAAACAGATGTGTTTTAGGTGTTGGTTTGAATTTAACTAATGTTGGAGGAAGCACATTTGATCATTTCTGGAAGCTGATTCCAGCAGCACCGGGGGACGGGGGTGCAGTAGCTGAAAGCGGATTCACCCTGCTTTCACTGAACTCCTGGAATTTCTAATTTACTTGATCCTAACGATTTGAGGGATCTGTTAGGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa1948

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111836	Essential Splice Site	495	1215	8	26
ENSDART00000140351	Essential Splice Site	495	1202	9	26

Genomic Location (Zv9):

Chromosome 23 (position 32233290)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	32068180
GRCz11	23	31994711

KASP Assay ID:

554-1936.1 (used for ordering genotyping assays)

KASP Sequence:

TCGAGACGAGGAGCCACATCTTTACATGGTGCCAAAGAAATACAGGAAGG[T/C]AGTGATGAGCTATTGTTGTGCATAATCCTGTTCCGCATCATCCAAATAAT

Long Flanking Sequence:

CTCTAATGTTCTGGTTCTGGTCAAAATCCTGGCAGCAGAGTTCTGGATGAGCTGCAACTTTCTGACTGTCTTTTTGAGAAGGCCAGTAAGGAGTCCATTACAGTAATCCACCCTGCTGCTGATAAAAGCATGAAGAAAAAATACGAAGTTGGTTCTTTGTATATATCCTAAACATGAAGAACTTTAATATTTTTTAAAAAGTATCACTAATTAAGCATGCATGATCACTATACTCTTAATCAGTATTGTTTTTCATATTCTGTAAGAGGGAAGTCATGTCATACAGTAATGTAGCTGTGTCATTTTTTGTTGATGCGTCATTCATTTCAGTGCAGTAATGCTGTGTAACCAGTATCTTGATCCTCTTTTTTTTTGCCAGGTTCCATATAAGATAAAAGATGTCGAGCTTGACTATGACAGCTATAATCAGGTGCCGGAGTCTCCCATTGGTCGAGACGAGGAGCCACATCTTTACATGGTGCCAAAGAAATACAGGAAGG[T/C]AGTGATGAGCTATTGTTGTGCATAATCCTGTTCCGCATCATCCAAATAATGACACACCACTAGAGCTATTTTGCACATTACAGGTGTTTGTGTGCAAGTTATTTTTAGATCAGATGATGTTGAACCTTTTTTGGAAGCGTAAAGGAAGTGGTTGCACGCAACACATTAGTTTATTATTGCAGTAGTATTCGTTTAATTCTGCAGTAATATTAATCATTTATCACAGTGTCGTGTTGGAGGCTCAGTGGTGATTGTCATGTTTGTTATTTACATCTGAAATATTCTACCATTCTGAAGTGACAGAATTTTTATATTTTATGCCAGGTGACCATTAAATATTCCAAACTGGGACTGGAAGACTTTGATTTTAAGCACTATAATCGGACTCTGTTTGCTGGTCTGGAGCCTCACATACCCAACGCTTACTGTAACTGTATGATCCAGGTAAAAATATGAAACTACACACATCCACACATTCAGTCAATCAAACACACACACAC

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461

Mutation Details

Allele Name:

sa45007

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111836	Nonsense	1110	1215	24	26
ENSDART00000140351	Nonsense	1101	1202	24	26

Genomic Location (Zv9):

Chromosome 23 (position 32244479)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	32079369
GRCz11	23	32005900

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTACAGCAAAAACAAATGTTGAAACCTTCACTTTTTAGGTCCCAAAAGAC[C/T]AGGTGATCGACACTGTCTACCTCTTTCACATGCCTAGGAAACGAATGATC

Long Flanking Sequence:

CCATGCTTATGACATCATACATTCTGGATATCCAGTTTAGTTTTATATAAACATGCTTTAATATGTTTTGTGTATTATTAGACTGCACAGAGCAGCATTACAACATAACCTTAAATATATATTTAGTTTTATAAAACAGCACTGTTTACTCCCCATATAATCTCTTCTCTCATCAGCAACTACGTCAGAGGAATCCTATAAGATGTAATAAAGATGAGAACTTACATGATTTCACAAGCATTGACGACTTTATCAAAATATGCCTTTGTTTGTTGTGAATATGTGCCCTCTAGTGGTGAAAATTGCATACAGTGCCTTTACACAGTTCTGTATGCTTATTTGCATTGAGTTTCTGTTGTATGATTGGCTAATTCAATATTCTTGTTAATGATCAGCTGACTACTAGAGGTTACCTAATAAAGTGTTTGGTGAGAGTATCATTTAATATGTTTACAGCAAAAACAAATGTTGAAACCTTCACTTTTTAGGTCCCAAAAGAC[C/T]AGGTGATCGACACTGTCTACCTCTTTCACATGCCTAGGAAACGAATGATCTCTCTGCGGTTCCTTGCATGGTATTTTCTTGGTAGGTTTTTGTTATAAACTTTCCCTCAACTCCTGACCTGAAGTGTAAGTTTCTGCGTCTCAGTGTTTTGTGGCTTTTTTGGTTGTTTGTTTAGATTTGAACATCCAGGGTGAAACTCATGACAGTATTGAAGATGCGCGGACTGCTTTGCAGTTGTACAGGAAGTACCTAGAGCTGAGCCATAATGGAGGACAGGAGGAGTTCCGGAAGGTTCTCAAGGCTCTCTATGAGAAAGGACGCAAGCTAGACTGGAAAGTTCCAGACATCGATTCTGCAGATGGTCAAGGTAGCCCAAAAAGTATGAATCACTGACATGGCAGTGAGATTTTTTTACATAATGTTTGTTGTTGCTCATGTTTATTTATAATCATTATTATATGAATAAGGAGGTCATATTTTTTATCTTAAAAAAATGTGAC

Associated Phenotype:

Not determined