Busch Lab

ZMP

si:ch211-273a21.1

Ensembl ID:
ENSDARG00000013647
ZFIN ID:
ZDB-GENE-090312-57
Human Orthologues:
CNTN1, CNTN2, CNTN5
Human Descriptions:
contactin 1 [Source:HGNC Symbol;Acc:2171]
contactin 2 (axonal) [Source:HGNC Symbol;Acc:2172]
contactin 5 [Source:HGNC Symbol;Acc:2175]
Mouse Orthologues:
Cntn1, Cntn2, Cntn5
Mouse Descriptions:
contactin 1 Gene [Source:MGI Symbol;Acc:MGI:105980]
contactin 2 Gene [Source:MGI Symbol;Acc:MGI:104518]
contactin 5 Gene [Source:MGI Symbol;Acc:MGI:3042287]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa1947 Nonsense Available for shipment Available now
sa1280 Nonsense Available for shipment Available now
sa32427 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa1947
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104954 Nonsense 110 966 3 22
ENSDART00000131232 Nonsense 110 929 3 19
Genomic Location (Zv9):
Chromosome 23 (position 11215423)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 11174225
GRCz11 23 11109195
KASP Assay ID:
554-1935.1 (used for ordering genotyping assays)
KASP Sequence:
CATTTGCATGGGTCTTTAAYGAGTACCCTTACTTTGTTCAGCAAGACAAT[C/T]GACGCTTTGTCTCTCAGGAGACGGGAAACCTTTACATCGCCAAAGTGGAG
Long Flanking Sequence:
AATAAAAAACATTTAGGACTGGTTTTGTGGTCCAGGGTCACATATTTGTTGGATTGAATGTCTTTTAATGAAGTGTGTAAGTCTCTTAATCTTTTTAGTATATGAAATTGACACCAATGGGTCAGATTTACTTTATTTATTTATTTATTTATTCATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATATGTTTGTTTGTTTGTATTTTATAAAAATGTGTGCAACACAGTTTCACCATGTGAATCGGGATTTTGGATCAACTTGGGTCAGACTTCAGAAGTGCTATTAAAATCTGAGACTGTGTTAATGATAATACTAAAAAAAGTACAAAGTATGTCTCATTTTCAAAGAGCTGATTTGTTTTGAATTATATATGTTCTGTGCCCTTCTTCTTTCCAGACCTCTCATTTGCATGGGTCTTTAACGAGTACCCTTACTTTGTTCAGCAAGACAAT[C/T]GACGCTTTGTCTCTCAGGAGACGGGAAACCTTTACATCGCCAAAGTGGAGCCTTCGGATGTGGGCAACTACACGTGTGTGGTGGTAAACCGCATCACTAAAGGCAAAGTCCTCAGCTCCCCGACACCTCTGGTACTACGAACGGATGGTAAATTACTTTCTCTTTTTTTTTTCCTGGTGTTTTCCAATTTAGTAGGCAGCAGAAGCTGAATCATAGCAGCAGTTAAAAGGTTTGATTGACCTGTTAATGCATTTGGAGGATTGTGTCAGAACGCTTAAGCCGGGTTCACAGTACAGGAGTTTTAGGCTGATTTATCCCTCATTTACCTCTTCTCACTGTCTGAGGAAAAAAACTCTTGTTTAGATCCTTTTGTGGGTTTTGAGGCATTTACAAATCACGTAAACCACTGACCTGCTTAGAGCACATTTAGACTGCCCTTATATAATATTAAGCGTATGATATTTAGGATTTTAACCCTGTAAAGTCTGACACATCAAAAA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa1280
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104954 Nonsense 486 966 10 22
ENSDART00000131232 Nonsense 486 929 10 19
Genomic Location (Zv9):
Chromosome 23 (position 11160230)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 11119032
GRCz11 23 11054002
KASP Assay ID:
554-1195.1 (used for ordering genotyping assays)
KASP Sequence:
ATGTCTCGTTCTCTTGGGCCTTCAATGGGCAGCTGCTCAGTAAACTCGAC[C/T]AACATTATGAGCATGTGGGTGGGGTAAGTCAGACTTTACTACGTCTATAT
Long Flanking Sequence:
TTCATACAAGTTTGAGATGATCTAAAGGTAAAGGATGACATAATTTAAATGTTTGCATAAAGCTATACTTTGTTTTATTTATATGAAAATATAATTTAATATTTAATGAAATAATATTCCAAATAAGAAACTAAAACATCCACTAGGTGATTATAAATTCAATTAAAGTCCTTTAAGTCATTGAGACATTTATTCATTTGATTTGTTTAAATCTGACTCTTTCAGAAATCAATTAAATGGCTCTTTGTGAATGGAATTGAATTTTTGGGATTTTTTGTAACTTTTAGTATTTATCCAACTAAATCAACCTTATGGCAGGTCATTAAGTGAAGCTGTGTGTTTTTTTTTGAGCAGATCCCACACAGATCACGCAGGGTCCAATGGACATGGAGATCATCGTGGGCGAGAGTATCGTACTGCCCTGTCAGATCTCCTGTGACCCTGCTCTCGATGTCTCGTTCTCTTGGGCCTTCAATGGGCAGCTGCTCAGTAAACTCGAC[C/T]AACATTATGAGCATGTGGGTGGGGTAAGTCAGACTTTACTACGTCTATATTCTGTAATATATTGTTTAATGTGTCATAAACCTGTGTACAAATTTCCGACAAATGTTAAGCATTTCAACCTTACCATACAGTATCTTAAAGGTACAGTACACTAAATAATTTCTGCTTTATGTTGCTTATGTTCAATTATTTTAACCCCTTTCCAGTGTCAGTGGCCAAATAAAACGTAGAAGTGAAATATGTACTATTCAAACTATCCCAATGTTTTATTAGATATGGTTTAGTTAGATTTTTTTTAATAAACACTTGGATTACCGCTGAAGTGAAAGCTTTACAATGTAAATAAAAGGTCAAAAAAGTTCAAGAATCTCAAGTTCCATGTAAAGTGAATGCTCTATACTAAATATTTTTATTTTAGATTAAATATTTTGAAACCTGAAACTGCTATATTATCAAACCCAAATGTATAATCAAGTTATGTTACGAATTTGAAGTTGATT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa32427
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104954 Nonsense 761 966 16 22
ENSDART00000131232 Nonsense 760 929 16 19
Genomic Location (Zv9):
Chromosome 23 (position 11130384)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 11089186
GRCz11 23 11024156
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGGCGTGTGGGCCAGAAGCATCTCCGCCACTGAAATTGAAGTGAGCTG[G/A]CACATCCTCAGCGTTTCAACAGAAAGAGTGTTGGGCTATGAGGTGCGTCC
Long Flanking Sequence:
TTCTCGTCTTGTCTCAGTTTAATTTTTCTTATCTAATGTTTTTTTTCTTTTTATCTTGCTTTTTCTCATCTTTTACCTACTCATTTGTGTCTTCTATCTTCTCATGTTGATTTGTCTCTTAGCTCTTTTTGTTTTGTCTCATCTCATTTCTTTTTATTTTGTCTTGTCTCATCTCTTCTCAATTTGTATTTTTGTAATTTCTCCTTACCTTGTATCTTTTCATCTTGCTTTGTCTCATCGCTCCTCATTTTGTAATTTTTCTTTCTCCTCATCTATCTCTACTCATCGCTTTTGTTTTCATCTTTCTTCTTTTCTCATTTTCTCTCAGCTTATGTTATCTAGTCCCAGCTTGTCTGGTATCATCCCGTCTCTTTTCCTCTCTTCTGTCTTTATTCATTAATCTTTTTTTCTCTCTTTTTATCTTTCCTCTCAGAACCCAGTGGTGTTCCAGACGGCGTGTGGGCCAGAAGCATCTCCGCCACTGAAATTGAAGTGAGCTG[G/A]CACATCCTCAGCGTTTCAACAGAAAGAGTGTTGGGCTATGAGGTGCGTCCCTCCTTCTAAATGGAAATGACTCTCTGTCCGTTTTTTGAAATGCACCATGGCTTCTGTCAGAGCCTGTCATCTCCCACGCTGCACCTCAAAGTTCCTTCTGTACCCATGGAAACGCTCCATTTGGAAATAAGAATAGGGTTCACGGTTCTTACCGTATGCATAGGAGGCCCTCACTGCAGTATGGGCGAAAAAAATGACTCGCCTTTATCCTTTTTGAGGACACAGAGAACACATTACACATTCCTCTATGAAACTCTTCATCCATGTCACCCCAAACCCACAGTGTGGAGATATAAAATAAAAGAGTGAAATCCTCCTGTATAATGCTTCCTGCACTGAAAATAATGGCAGCGTAGCATTATATCTGTGAGACTTTTGTTTTCTCTCTCTTGCTTTTAAAATCAGGTGGTGTACTGGGAGGACGATACAAAACCAGAGACCATGGGCAA
Associated Phenotype:
Not determined