ZMP
trpc5
Ensembl ID:
ZFIN ID:
Description:
transient receptor potential cation channel, subfamily C, member 5 [Source:RefSeq peptide;Acc:NP_00
Human Orthologue:
TRPC5
Human Description:
transient receptor potential cation channel, subfamily C, member 5 [Source:HGNC Symbol;Acc:12337]
Mouse Orthologue:
Trpc5
Mouse Description:
transient receptor potential cation channel, subfamily C, member 5 Gene [Source:MGI Symbol;Acc:MGI:1
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa5799 | Essential Splice Site | F2 line generated | Not yet available |
| sa3325 | Essential Splice Site | F2 line generated | Not yet available |
| sa19436 | Nonsense | Available for shipment | Available now |
| sa32604 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa32603 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa5799
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000040502 | None | None | 984 | None | 13 |
| ENSDART00000131294 | Essential Splice Site | None | 1045 | 3 | 12 |
| ENSDART00000140495 | Essential Splice Site | None | 570 | 3 | 7 |
| ENSDART00000040502 | None | None | 984 | None | 13 |
| ENSDART00000131294 | Essential Splice Site | None | 1045 | 3 | 12 |
| ENSDART00000140495 | Essential Splice Site | None | 570 | 3 | 7 |
The following transcripts of ENSDARG00000070504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 9754049)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 9893835 |
| GRCz11 | 1 | 10577946 |
KASP Assay ID:
554-2635.1 (used for ordering genotyping assays)
KASP Sequence:
TAWCATATATATCAAATGATTATAGCATCTTTTTTTTTTTTCTTCCAGCA[G/A]CATCCATCATGAATCCCATGTCACATCTATACTACAAAAAGAGCAGCTAC
Long Flanking Sequence:
GGGATAACAAAACACACAAACAAATAACCACTTGTTACAAGTGAGGTCTGCAGAAGAGCATCTCTGAACACACAACATGTCAAATCTTGAGTTGTGCCACGAAGGATTAAGGCAGTTCTAAAGGCAAAATGGGATCCAACAGGGTACTAGTAAGGTGTGCCTAATAAAGTGGCCGATGACTGTATATCCACTAAAAGACTGTTCATGCTCAAATGAACATATTATTTTTATTAGTTATGTTCTGAAATTAATTTAAAAGCTGAATAAATAAATATAAATTTACACACATTTGCACAAATAAATTAACACTCAATGATGAGCTCAAAATCTGTAGAAATCTATGGATTTCTGTGCATGCAGATTCCGTGTATCATTAATTATTCCTAAGATGTCATTTATGCACAGTATTTCTATGGTTTAAGTAAGCTGACTCACTGTTATAAATGTTATTATCATATATATCAAATGATTATAGCATCTTTTTTTTTTTTCTTCCAGCA[G/A]CATCCATCATGAATCCCATGTCACATCTATACTACAAAAAGAGCAGCTACTCTCCGTACCGGGACCGAATCCCTCTGCAGATCGTCCGGGCGGAGGTAGAGCTCTCTCCAGAGGAGCGTGCGTTCCTTTCGGCTGTGGAAAAGGGCGACTATGCAGGAGTCCAGCATGCACTGCGTGAGGCTGAGGTCTATTACAACATCGACACGAACTGTGTGGATCCACTTGGCCGCAGTGCTCTATTAATTGCCATTGAGAACGAAAACCTAGAGGTGATGGAGCTGCTTCTGGATCATGGAGTAAACACTGGAGACGCTCTGCTCTACGCCATCCGCAAAGAAGTGGTGGGGGCCGTGGAGCTACTGCTGTCCCACAGGAAACCCAGTGGAGAGAAACAGGTCGGTTTGCGCATTGGGATTTTTGTTTTTCTGCGCTTTAGGATATGTTTACATAATGATGTACTTAACTCTTTGATGCACAAGCTATAAAATAGATAAAGAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa3325
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000040502 | None | None | 984 | None | 13 |
| ENSDART00000131294 | Essential Splice Site | None | 1045 | 3 | 12 |
| ENSDART00000140495 | Essential Splice Site | None | 570 | 3 | 7 |
| ENSDART00000040502 | None | None | 984 | None | 13 |
| ENSDART00000131294 | Essential Splice Site | None | 1045 | 3 | 12 |
| ENSDART00000140495 | Essential Splice Site | None | 570 | 3 | 7 |
The following transcripts of ENSDARG00000070504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 9754049)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 9893835 |
| GRCz11 | 1 | 10577946 |
KASP Assay ID:
554-2635.1 (used for ordering genotyping assays)
KASP Sequence:
TATCATATATATCAAATGATTATAGCATCTTTTTTTTTTTTCTTCCAGCA[G/A]CATCCATCATGAATCCCATGTCACATCTATACTACAAAAAGAGCAGCTAC
Long Flanking Sequence:
GGGATAACAAAACACACAAACAAATAACCACTTGTTACAAGTGAGGTCTGCAGAAGAGCATCTCTGAACACACAACATGTCAAATCTTGAGTTGTGCCACGAAGGATTAAGGCAGTTCTAAAGGCAAAATGGGATCCAACAGGGTACTAGTAAGGTGTGCCTAATAAAGTGGCCGATGACTGTATATCCACTAAAAGACTGTTCATGCTCAAATGAACATATTATTTTTATTAGTTATGTTCTGAAATTAATTTAAAAGCTGAATAAATAAATATAAATTTACACACATTTGCACAAATAAATTAACACTCAATGATGAGCTCAAAATCTGTAGAAATCTATGGATTTCTGTGCATGCAGATTCCGTGTATCATTAATTATTCCTAAGATGTCATTTATGCACAGTATTTCTATGGTTTAAGTAAGCTGACTCACTGTTATAAATGTTATTATCATATATATCAAATGATTATAGCATCTTTTTTTTTTTTCTTCCAGCA[G/A]CATCCATCATGAATCCCATGTCACATCTATACTACAAAAAGAGCAGCTACTCTCCGTACCGGGACCGAATCCCTCTGCAGATCGTCCGGGCGGAGGTAGAGCTCTCTCCAGAGGAGCGTGCGTTCCTTTCGGCTGTGGAAAAGGGCGACTATGCAGGAGTCCAGCATGCACTGCGTGAGGCTGAGGTCTATTACAACATCGACACGAACTGTGTGGATCCACTTGGCCGCAGTGCTCTATTAATTGCCATTGAGAACGAAAACCTAGAGGTGATGGAGCTGCTTCTGGATCATGGAGTAAACACTGGAGACGCTCTGCTCTACGCCATCCGCAAAGAAGTGGTGGGGGCCGTGGAGCTACTGCTGTCCCACAGGAAACCCAGTGGAGAGAAACAGGTCGGTTTGCGCATTGGGATTTTTGTTTTTCTGCGCTTTAGGATATGTTTACATAATGATGTACTTAACTCTTTGATGCACAAGCTATAAAATAGATAAAGAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19436
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000040502 | Nonsense | 225 | 984 | 2 | 13 |
| ENSDART00000131294 | Nonsense | 228 | 1045 | 4 | 12 |
| ENSDART00000140495 | Nonsense | 228 | 570 | 4 | 7 |
The following transcripts of ENSDARG00000070504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 9739318)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 9879104 |
| GRCz11 | 1 | 10563215 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCGCCCTCTCCAGCGAGGATCCCATCCTGACCGCCTTCAGACTGGGCTG[G/A]GAACTCAAGGAGCTCAGCAAAGTGGAGAACGAGTTTCGGCAGGAGTACGA
Long Flanking Sequence:
CCTTTCATGGTAAAAGTTGGTGGTCCCGTAATGCAACCTCATTTTTACAGTGTAGTCATCAATATTCTGTTGCTTTGCTGTACTGCTGTTACATTACTTAAACCTGTTGAAACTTGCAACAGTCAAATTGACTGTTTTTTATAATTATGCACACAGCTCATAGTAGAAACACTCTTGATGAACTTTGTCCTGCTTGTTTCTCAGGTCCCTTCCTTAATGATGGACGCCCAGTTCTCGGAGTTCACGCCTGACATCACCCCTATCATGCTGGCAGCTCACACAAACAACTACGAGATCATCAAACTCCTGGTTCAGCGCAAAGTCACCATCCCTCGGCCGCACCAGATCCGCTGCGACTGCGTGGAGTGTGTGTCCAGCTCTGAAGTGGACAGTCTGCGTCACTCCCGGTCCCGTCTCAACATCTACAAAGCGCTTGCCAGCCCGTCCCTCATCGCCCTCTCCAGCGAGGATCCCATCCTGACCGCCTTCAGACTGGGCTG[G/A]GAACTCAAGGAGCTCAGCAAAGTGGAGAACGAGTTTCGGCAGGAGTACGAAGAGCTTTCTCAGCAGTGCAAGCTCTTCGCTAAAGACCTGCTGGACCAGGCACGAAGCTCGCGTGAGCTGGAGACCATTCTCAACCACCGTGACGATCAGAGTGAGGAGCTGGACCCACGCGAGTGCAGAGACCTGGCCAAACTCAAGCTGGCCATCAAATACCACCAGAAAGAGGTGAGAAGATTTCTTCTAGATTGTTGTGGATGGGCATTGCTAATGGTGGACGTGTAGCGAATTAGCTGTGCACAAGTTTATTCTCTGAGGTGAAGTTTATTGCTTAGTAAATCACTGTAAGAGTTCATTTGGAGAGTGTTTGTTGCTGAGGATTTACACTAGCGGCGTTTTGCAATTGCATCAAATAGTTTCCTATTAATTCTTCTTGCTAAATGCTGTCAGCAAATGCAACACAGTAAAGATATTATTTCTAAAAGTGTGTTGTATATGTTTAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32604
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000040502 | Nonsense | 420 | 984 | 5 | 13 |
| ENSDART00000131294 | Nonsense | 437 | 1045 | 6 | 12 |
| ENSDART00000140495 | Nonsense | 437 | 570 | 6 | 7 |
The following transcripts of ENSDARG00000070504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 9693633)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 9833419 |
| GRCz11 | 1 | 10517530 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATTAAGGAGATGTGGGATGGAGGTTTTAACGAGTACGTCCATGACTG[G/A]TGGAACCTGATGGACTTTGCTATGAATTCTCTCTATTTGGCCACCATTTC
Long Flanking Sequence:
GTAAAAAAGTCCAGAGCTTATTACTGTTATTGACTAATTTTATCCCGATTCGATATAATATTGTTTATCGGCCAAGTCCTATCTTAAAAACATTCAATGTGACGGGAAGTAAAGAAAGTCATTTCGAGGGTTGTGGCATTTGGTTAAAGATTATGATGGTAAATTAATTTTTGTGAAGTAATGAAGTGCATAGACACATTGTGTATAACTTGCACTACTATATACAGTAAACAGTGTATACAGAAATAACAAAAGTACATTTTGATTTTCTTCAAACCGGAAGTTAAGACAAGTCATTTGGAGGAGGGCCGGGAAGGTTATGGTTTTTGATTAAAGATTATGAGGGCAAAATAATTTATATAAAATAAAAGAAAATTCCCATTAAACAATATGTTTTGCATCTCAAGTTAATATCTGTGTATGTTGTTTCTCCTAGGCTTTATATGGGCTGAGATTAAGGAGATGTGGGATGGAGGTTTTAACGAGTACGTCCATGACTG[G/A]TGGAACCTGATGGACTTTGCTATGAATTCTCTCTATTTGGCCACCATTTCTCTAAAGATCGTGGCTTATGTCAAGGTGAGCAGTTCAGTCCTCTTCACTCACACTAAAGTCCACACAGACACACACAAACAAGCAGACACACAGATAAATAAACACATACAGTCAAACTTGTCTCTGGCTTATTCCCTGCTTTATCAACAGTCAGACTGCCAATTACTCTGGCATATGTTTTACCAGTGGATGCCCTTCCAGCCTTAACCCAGCATCAAGAGTACAACCCCTAGTGCTGGAAAAAACACACACACTGCCATTCACACACTACAGCCTATTTAATTTATCCAATTCACCTATATTTCATGACTGTGGGGGAAACCGGATCACCCGGAGGAAACACATACAGACACAGGGAGAACATACAAACTCCACACGGAAAGGTTTCCTGATCCAGCACATTTTTTGTATTTCAAAAGACTCTGTTAAGTATGATTTTTAAGTGCTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32603
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000040502 | Nonsense | 760 | 984 | 11 | 13 |
| ENSDART00000131294 | Nonsense | 781 | 1045 | 12 | 12 |
| ENSDART00000140495 | None | None | 570 | None | 7 |
The following transcripts of ENSDARG00000070504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 9663780)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 9803566 |
| GRCz11 | 1 | 10487677 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACGAGGTTTTAGACCTTCTCGGCAACCGAAAGCCTCCCCGGCGGAACTA[T/A]TCATCCAGCAGCGAGGCCACACTTCGAGACGAGGTCAGCGACGACGGCGA
Long Flanking Sequence:
CGGCTGAAAGGGTATCCGCTGCGTAAAAACGTGCTGGATAAGTTGGCGGTTCATTCCGCTGTGGCGACCCTGGATTAATAAAGGGACTAAAATGAATGAATGAATAAATGTATAAATCAATTATATACACACACACACACACACACACACACACACACACACTATAAAAATGCTGGGTTCCACACAATTCCATCATGTTGTCCCAACACAAACTGATTATCTAAAACAAATTTAAGTGGATTGAACAAAAAACAATTAAGTTGTCCCCAAAAAAAACTCAAGAATTGCATTGATTCAGCTCATTTTAAATATACAATGTCAATAAGCGGCAAAAATAATTTTTTTGAGTGCACACACACACATGCACTGTATATCTTTTCTGAATGCGTTTCATAATTCTGCGCTATCTTTCTGCTGTAGGAGCTAAAACAGGACATTTCCAGCTTCCGCTACGAGGTTTTAGACCTTCTCGGCAACCGAAAGCCTCCCCGGCGGAACTA[T/A]TCATCCAGCAGCGAGGCCACACTTCGAGACGAGGTCAGCGACGACGGCGAAGCCCGTCATCACAGTGACGGGAGCAGCATCGGAGCCAAGGGCGTCTCTTTCAAAACCATCACACCTTCGGATCCATCGTACGGGGTCTCTGCCCTCTTCCACTCCATCTCCGGAATGGAGGCCGCTGGGACGACAAGAGAGGGTAAACCAAAGATCAATGGACTGAGGAAGAACCCCTCGCCCTCCTCTTCCCTCTCATCAGTGGCTCCAGCGAGAGCTCCAGCACTTTCACGGACTTGGAGGCGATTTTCCCGCTTCTCGAGCTCCAAGAAGAACTCTTTCAGACGGCTCGGACTGCTGTTTTCTCGCATGGGCAGCCACCTTCCACAGCCCACAGGCGTTACCGCTGCAACCTACACTATCTCAGATGGTTTGCTTCACCCGCCCGGGGCTTGGCATGACTTGGGCTTTACCAGGGGCGACGGCCCTGTCACCAGAAGTGAGACCAA
Associated Phenotype:
Not determined