ZMP
palb2
Ensembl ID:
ZFIN ID:
Description:
Fanconi N [Source:UniProtKB/TrEMBL;Acc:B5TXG1]
Human Orthologue:
PALB2
Human Description:
partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:26144]
Mouse Orthologue:
Palb2
Mouse Description:
partner and localizer of BRCA2 Gene [Source:MGI Symbol;Acc:MGI:3040695]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19427 | Nonsense | Available for shipment | Available now |
| sa19426 | Nonsense | Available for shipment | Available now |
| sa19425 | Nonsense | Available for shipment | Available now |
| sa19424 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19427
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113013 | None | None | 459 | None | 8 |
| ENSDART00000128550 | Nonsense | 357 | 1294 | 4 | 12 |
| ENSDART00000142132 | None | None | 131 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 8207743)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 8447548 |
| GRCz11 | 1 | 9131659 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGACGCATGGCTGCATCTAACAGCTCCATCGATCTAGATGCTGTCATTTA[T/G]AGCCAGCTCACAGGAGGGCGAGGCAGACGCAGACTGAGCCAATCCCAATT
Long Flanking Sequence:
GATAGGCCATCACGAGTAAAAACAGACAGTAAAATTGTGAAGCCACCTCAAGTTCTGGAGAATGATGGGAAAAAAGAGGAACACTGTGTATTAAACTGCTCTGTGAGTCAATCAAATGACAAACTGCCAGTGGTTTCAAGTATAGAAATTCATTTAGAAAATCAAAATGCTGACAGTAGCAAGGCAGAGGTTGATTTACCTCTTACTGATCGGCCTGTTAAGGAAGAATTACACTTTGGTCCACCAGTGTCTATCTCATTTTTCTCTCAGTCAGCTGAGGCAACTGACAAATCAGGAGAGATGTTAAAACAAACCAAACAGTCATCAACTAAAAAAGATTATGATGACAAGATTGATGTTAAACAATCCTCATTTACATCTGGTGTTCTAGACTCATGCACACTTGTCGAGGGTTTACCATTTCCAGTGGAGTATTATGTTCGGACGACACGACGCATGGCTGCATCTAACAGCTCCATCGATCTAGATGCTGTCATTTA[T/G]AGCCAGCTCACAGGAGGGCGAGGCAGACGCAGACTGAGCCAATCCCAATTGAGCAGTAGAGGTCAGGTGACCCCAGAGCGTTCAGAACCAGTCTGTAGGACCACTGACCAACAAAGAGGCAGAGGAAGAGGACGGAGAGGGAGGAGAGGACGTCGAAGAACGACTGTAGGACCCACATCATGTGCCAATCTTACAGCAGATTCTCCAGAGTCTCTTAACAAATCTCACGATGAATTACTCAGGCAATCAGAATTGGTTCTTGAAGGTCTGCAGGTTGAGTCTCAGTCAAACGATTTGCATGAGCCTGCAGTGAATTTAAACCCAGAGCAAGGAGCTACTCAAGATTTAAAGCATCTCCCAGATTCTCAGCTTTACATTGACTCCCAACTCATCCCGGATTCAGATTTGTATCCTATTTTCAGGAGAAAGCTTGGACAAACTGGATTAGAGTCTCAGAAAGGAACAAATAAATATGGTGAGAATTATTTCCTACTTGTGGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19426
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113013 | None | None | 459 | None | 8 |
| ENSDART00000128550 | Nonsense | 395 | 1294 | 4 | 12 |
| ENSDART00000142132 | None | None | 131 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 8207631)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 8447436 |
| GRCz11 | 1 | 9131547 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCAGGTGACCCCAGAGCGTTCAGAACCAGTCTGTAGGACCACTGACCAA[C/T]AAAGAGGCAGAGGAAGAGGACGGAGAGGGAGGAGAGGACGTCGAAGAACG
Long Flanking Sequence:
CAAATGACAAACTGCCAGTGGTTTCAAGTATAGAAATTCATTTAGAAAATCAAAATGCTGACAGTAGCAAGGCAGAGGTTGATTTACCTCTTACTGATCGGCCTGTTAAGGAAGAATTACACTTTGGTCCACCAGTGTCTATCTCATTTTTCTCTCAGTCAGCTGAGGCAACTGACAAATCAGGAGAGATGTTAAAACAAACCAAACAGTCATCAACTAAAAAAGATTATGATGACAAGATTGATGTTAAACAATCCTCATTTACATCTGGTGTTCTAGACTCATGCACACTTGTCGAGGGTTTACCATTTCCAGTGGAGTATTATGTTCGGACGACACGACGCATGGCTGCATCTAACAGCTCCATCGATCTAGATGCTGTCATTTATAGCCAGCTCACAGGAGGGCGAGGCAGACGCAGACTGAGCCAATCCCAATTGAGCAGTAGAGGTCAGGTGACCCCAGAGCGTTCAGAACCAGTCTGTAGGACCACTGACCAA[C/T]AAAGAGGCAGAGGAAGAGGACGGAGAGGGAGGAGAGGACGTCGAAGAACGACTGTAGGACCCACATCATGTGCCAATCTTACAGCAGATTCTCCAGAGTCTCTTAACAAATCTCACGATGAATTACTCAGGCAATCAGAATTGGTTCTTGAAGGTCTGCAGGTTGAGTCTCAGTCAAACGATTTGCATGAGCCTGCAGTGAATTTAAACCCAGAGCAAGGAGCTACTCAAGATTTAAAGCATCTCCCAGATTCTCAGCTTTACATTGACTCCCAACTCATCCCGGATTCAGATTTGTATCCTATTTTCAGGAGAAAGCTTGGACAAACTGGATTAGAGTCTCAGAAAGGAACAAATAAATATGGTGAGAATTATTTCCTACTTGTGGCTAAAATGTTGAGTTTCAGACATGATTTTTTATTTGTTGTTGTTTTTTATTTTGCATTTTAGATCAGTCGCCATTTTTGCCATCATTAACTTCACTTATCCAGGGTCTTCAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19425
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113013 | None | None | 459 | None | 8 |
| ENSDART00000128550 | Nonsense | 523 | 1294 | 5 | 12 |
| ENSDART00000142132 | None | None | 131 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 8207160)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 8446965 |
| GRCz11 | 1 | 9131076 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTTGTTGTTTTTTATTTTGCATTTTAGATCAGTCGCCATTTTTGCCAT[C/A]ATTAACTTCACTTATCCAGGGTCTTCAAGAAAAGAAAACAACAAGTGGAC
Long Flanking Sequence:
CAGAACCAGTCTGTAGGACCACTGACCAACAAAGAGGCAGAGGAAGAGGACGGAGAGGGAGGAGAGGACGTCGAAGAACGACTGTAGGACCCACATCATGTGCCAATCTTACAGCAGATTCTCCAGAGTCTCTTAACAAATCTCACGATGAATTACTCAGGCAATCAGAATTGGTTCTTGAAGGTCTGCAGGTTGAGTCTCAGTCAAACGATTTGCATGAGCCTGCAGTGAATTTAAACCCAGAGCAAGGAGCTACTCAAGATTTAAAGCATCTCCCAGATTCTCAGCTTTACATTGACTCCCAACTCATCCCGGATTCAGATTTGTATCCTATTTTCAGGAGAAAGCTTGGACAAACTGGATTAGAGTCTCAGAAAGGAACAAATAAATATGGTGAGAATTATTTCCTACTTGTGGCTAAAATGTTGAGTTTCAGACATGATTTTTTATTTGTTGTTGTTTTTTATTTTGCATTTTAGATCAGTCGCCATTTTTGCCAT[C/A]ATTAACTTCACTTATCCAGGGTCTTCAAGAAAAGAAAACAACAAGTGGACAAGTAACTCTTGATGATATCCAGGATTTCCACTTACCCGATGAGGATTTTGGCCAGCTGAAGCTTGAAAGATTACGCTTGCCCACTTCAATCGTAGAACCCTTCCCACAGCACCATCTAGCGTACAAAACACGGCAGAGCAGCAGGCGCCAGAGAGCGAGAAAGTGTAAAACTGATGCACATTTTTCAGTGGGGGAATTGTTTACTCCAGAACCCATATATATCTCTTCACTTGAGGACAGTTTACCACATTGCCAATCAGATGCCACTGACCAATCACAGACAGAGATACCAAAAGATCCTCATGCTGTAAATGAAAGCTCTTCAGGTCTGATGAACTGCACTGAACCAGGCGAATGCATGAATAATGAGAGAAAGGTTGAATCCTCAGAAGCAGAAAACATTAAAGGGCTGCAATCACAAATACAAAAACAATCTGACATACTCTTAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19424
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113013 | None | None | 459 | None | 8 |
| ENSDART00000128550 | Nonsense | 806 | 1294 | 5 | 12 |
| ENSDART00000142132 | None | None | 131 | None | 5 |
Genomic Location (Zv9):
Chromosome 1 (position 8206312)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 8446117 |
| GRCz11 | 1 | 9130228 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAGGATTCAGACACCATCTGAAATGACTCAAGAGTCAATACCAAAAGCT[C/T]AAAATAATGTGAAACTGAATATGTCTTCTCAGAGGAACATTGCATTGGGA
Long Flanking Sequence:
ATCCTCATGCTGTAAATGAAAGCTCTTCAGGTCTGATGAACTGCACTGAACCAGGCGAATGCATGAATAATGAGAGAAAGGTTGAATCCTCAGAAGCAGAAAACATTAAAGGGCTGCAATCACAAATACAAAAACAATCTGACATACTCTTAGAGAAAACCTCACTTTCTCCTGTGGTACTGAAGTTGAGTCCATCTTTGACTGCGCACACGCAGAAGAGTCAAGATCCTGTGCTGCCATCTCTAGGAATGTCCCCTCACTTTTTGACTCCAGCTTCACCCTTAGATCTCCGGACACCTCTCTTTTCATCATCTGGCATCCTTAAGTCTCCCTCTTCAGTGACACTCATGGGTTGTGTTTCTCCAGAATCCGTCTCAGCCAATACTTCAGAGAACATAAAAAATAGTAACTTTATAAAGCGAGGAGGTCGAGCTGAAGTTCAGAGAGGCTCTAGGATTCAGACACCATCTGAAATGACTCAAGAGTCAATACCAAAAGCT[C/T]AAAATAATGTGAAACTGAATATGTCTTCTCAGAGGAACATTGCATTGGGATATGAACATTTAAAAAGTCCAGAAACCCCAAAGAGAGAGTCCTCATGCATATCAGGAAATCACCTGGAACATGAAAGAAGTTTTGATGAAGAAAGCAATCTTGAATGTGGAAATAAAACCAAGTGCACAACAGAAAATGAAGCTCAGCTCCACAATAATCCCCAACTGGAGAGTATTAATCCTGTTCAAAATTGTGAAAGCTCTAAGCTTTGGTCTGAAACCCAAAGTAAAGCCATTATAAATGAAAAAACATTTAATTGTGGGAATGAATTTAGTTCTGAATGTCAAACTCCTTTTGATAAGACCTCTTTGGAGACTTCTGTAAATGAGAGTACAGAAAGAAGGAATCCGTCAGAGGAATTTTCTTCCAACAATCTGACATTATTTCATGAGCAAACGCCATTCTCTGATGCAGGTCATTTTTCCACAGTCCTGCAGGAGATGCATACT
Associated Phenotype:
Not determined