Busch Lab

ZMP

trmt6

Ensembl ID:
ENSDARG00000042344
ZFIN ID:
ZDB-GENE-051120-141
Description:
fermitin family homolog 1 [Source:RefSeq peptide;Acc:NP_001032469]
Human Orthologue:
TRMT6
Human Description:
tRNA methyltransferase 6 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20900]
Mouse Orthologue:
Trmt6
Mouse Description:
tRNA methyltransferase 6 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1914176]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa11287 Nonsense Available for shipment Available now
sa19244 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa11287
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062092 Nonsense 19 464 1 11
ENSDART00000062092 Nonsense 19 464 1 11
Genomic Location (Zv9):
Chromosome 20 (position 45974639)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 45868328
GRCz11 20 45772048
KASP Assay ID:
2261-4874.1 (used for ordering genotyping assays)
KASP Sequence:
GAGTGTGTGAATGACAGCGATGAAGAMAGCAGAATCGCATACGGAGACTA[T/G]GTAGTGCTGAAGAGAGGAGAAGTCTTYAAATCTGTCCWGGTGGAGAATAA
Long Flanking Sequence:
GAATGAATTTAAGTTTACACGGCCAAACATTTTATATTTCTTAATGACACAGTATGTTTAGCTCGTTTTCATGTGTACTTTAAGTTTGGGCAAACTCTTACTACAGATATTATATGATACGATGATGAAATTATTTAGAACATGCTGGTCTTTTTTATATTTATTTAATCTTTGTATAAAGCTAAGATGCATTCACTTCAATAAATATGAGATTTATTTTTTTATCTGTGACTCAACCAGTCAGCCTGTCATCAGTTCTCTAAATCTATGCTCGATTAGTCGGCCTCTCCAAACAGGAAGTGACCGAACACACGTGCGGTCGGAAAGCAGGAGCATCGCTTGAATGAGCCAATGTTTGGTGTGTAATCATTGATATTACGACTTTACTTTTGGGTTTGTTAAAGTATATTTCTACGCATCTTCCGGACGGTCTCAATCCAATAAATGGCGGAGTGTGTGAATGACAGCGATGAAGACAGCAGAATCGCATACGGAGACTA[T/G]GTAGTGCTGAAGAGAGGAGAAGTCTTTAAATCTGTCCAGGTGGAGAATAAAAAGTGAGTTGAATAACTAAATATTGTTTTATTAAATGCCATTTTATAATGCGTATTTTGCACTGGAAAGCCTGAGGTTTAGTATACAGTGGTATCTAAAATCGGACAGCACATTACACTGGGGTAAAGTTGGTTTTATTTTCGAACATTCGGACTTCTTAATAATATAAGTTCAGAAAAGTATTGTTTGCAAATTGTAAATATGGAAATCTTATTAGCAGCCAATGACTATCAAAATACAGCATTATCACGGGCAATTAAATAATGCTAATAGTCATACTTGCATGTGATTTCAGACCGAATATTCTGAGTACCATGGTAAACATTGCAGGGCTTGTTACCTAAAATGAAAGAAGTACACTTTAAAACATTTAACGACATGTATCCATGCAATGGGTTTCTTAGAATACGATTTAAAGTAAACAGTAATGTTTGTTGTAATGTAATGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19244
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062092 Nonsense 19 464 1 11
ENSDART00000062092 Nonsense 19 464 1 11
Genomic Location (Zv9):
Chromosome 20 (position 45974639)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 45868328
GRCz11 20 45772048
KASP Assay ID:
2261-4874.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGTGTGTGAATGACAGCGATGAAGACAGCAGAATCGCATACGGAGACTA[T/G]GTAGTGCTGAAGAGAGGAGAAGTCTTTAAATCTGTCCAGGTGGAGAATAA
Long Flanking Sequence:
GAATGAATTTAAGTTTACACGGCCAAACATTTTATATTTCTTAATGACACAGTATGTTTAGCTCGTTTTCATGTGTACTTTAAGTTTGGGCAAACTCTTACTACAGATATTATATGATACGATGATGAAATTATTTAGAACATGCTGGTCTTTTTTATATTTATTTAATCTTTGTATAAAGCTAAGATGCATTCACTTCAATAAATATGAGATTTATTTTTTTATCTGTGACTCAACCAGTCAGCCTGTCATCAGTTCTCTAAATCTATGCTCGATTAGTCGGCCTCTCCAAACAGGAAGTGACCGAACACACGTGCGGTCGGAAAGCAGGAGCATCGCTTGAATGAGCCAATGTTTGGTGTGTAATCATTGATATTACGACTTTACTTTTGGGTTTGTTAAAGTATATTTCTACGCATCTTCCGGACGGTCTCAATCCAATAAATGGCGGAGTGTGTGAATGACAGCGATGAAGACAGCAGAATCGCATACGGAGACTA[T/G]GTAGTGCTGAAGAGAGGAGAAGTCTTTAAATCTGTCCAGGTGGAGAATAAAAAGTGAGTTGAATAACTAAATATTGTTTTATTAAATGCCATTTTATAATGCGTATTTTGCACTGGAAAGCCTGAGGTTTAGTATACAGTGGTATCTAAAATCGGACAGCACATTACACTGGGGTAAAGTTGGTTTTATTTTCGAACATTCGGACTTCTTAATAATATAAGTTCAGAAAAGTATTGTTTGCAAATTGTAAATATGGAAATCTTATTAGCAGCCAATGACTATCAAAATACAGCATTATCACGGGCAATTAAATAATGCTAATAGTCATACTTGCATGTGATTTCAGACCGAATATTCTGAGTACCATGGTAAACATTGCAGGGCTTGTTACCTAAAATGAAAGAAGTACACTTTAAAACATTTAACGACATGTATCCATGCAATGGGTTTCTTAGAATACGATTTAAAGTAAACAGTAATGTTTGTTGTAATGTAATGCA
Associated Phenotype:
Not determined