ZMP
prdm9
Ensembl ID:
ZFIN ID:
Description:
Histone-lysine N-methyltransferase PRDM9 [Source:UniProtKB/Swiss-Prot;Acc:Q6P2A1]
Human Orthologue:
PRDM7
Human Description:
PR domain containing 7 [Source:HGNC Symbol;Acc:9351]
Mouse Orthologue:
Prdm9
Mouse Description:
PR domain containing 9 Gene [Source:MGI Symbol;Acc:MGI:2384854]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1923 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa1923
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000027321 | Nonsense | 354 | 853 | 6 | 6 |
| ENSDART00000126858 | Nonsense | 311 | 598 | 6 | 8 |
| ENSDART00000129894 | Nonsense | 311 | 629 | 6 | 9 |
Genomic Location (Zv9):
Chromosome 12 (position 10757984)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 12 | 9745406 |
| GRCz11 | 12 | 9783249 |
KASP Assay ID:
554-1912.1 (used for ordering genotyping assays)
KASP Sequence:
ATGCATGTGTTGATTGCGGTCGGTCGTTTTTGAGATCTTGTCATCTGAAG[C/T]GACATCAGCGCACCATTCACTCCAAAGAGAAGCCTTATTGCTGCAGCCAA
Long Flanking Sequence:
CAGTATTGCATTGTAGCGACAGCTATACACAGTGAATTTGGTACACATACCTGTGATGACAAAGAGGCTTTTCTGTAATTGAATTTCTTTTTTTTTCAGGTTCAACTGAAGAACAGGCAACTCAGAATTGTCCATGTCCTTTTTGCCATTACTCCTTCCCTACCCTTGTTTATCTGCATGCGCATGTGAAGCGCACGCACCCTAATGAGTACGCACAATTCACACAGACACATCCGCTTGAATCTGAAGCCCATACACCCATCACTGAAGTAGAACAGTGTCTTGTGGCCTCCGATGAAGCGCTTTCAACACAAACGCAGCCGGTGACAGAAAGTCCTCAGGAGCAGATTTCAACCCAAAACGGACAACCCATCCATCAGACTGAAAACTCGGATGAGCCTGATGCATCTGATATATACACTGCTGCAGGTGAAATTTCAGATGAAATACATGCATGTGTTGATTGCGGTCGGTCGTTTTTGAGATCTTGTCATCTGAAG[C/T]GACATCAGCGCACCATTCACTCCAAAGAGAAGCCTTATTGCTGCAGCCAATGTAAGAAGTGCTTTAGTCAAGCAACAGGGCTGAAAAGACACCAGCACACCCACCAGGAACAAGAAAAGAACATTGAAAGTCCAGACAGACCTTCTGATATATACCCCTGCACTAAGTGCACCTTGTCCTTCGTGGCGAAGATCAATTTACATCAACATCTCAAACGACATCACCACGGAGAGTACCTCCGATTAGTTGAGAGTGGCTCACTTACTGCAGAAACCGAAGAAGATCATACAGAAGTGTGTTTTGACAAGCAGGATCCAAACTATGAACCTCCTTCTCGAGGAAGGAAGTCCACAAAGAACTCTTTAAAAGGCAGAGGTTGTCCTAAAAAAGTGGCTGTAGGCAGGCCTCGAGGACGACCACCTAAAAACAAGAATCTGGAGGTTGAAGTGCAGAAGATTTCTCCCATCTGCACTAACTGCGAACAGAGCTTCTCTGATTTG
Associated Phenotype:
Not determined