ZMP
si:ch211-245g11.2
Ensembl ID:
ZFIN ID:
Description:
Si:ch211-245g11.2 protein [Source:UniProtKB/TrEMBL;Acc:A8WFY7]
Human Orthologue:
SFRS15
Human Description:
splicing factor, arginine/serine-rich 15 [Source:HGNC Symbol;Acc:19304]
Mouse Orthologue:
Srsf15
Mouse Description:
serine/arginine-rich splicing factor 15 Gene [Source:MGI Symbol;Acc:MGI:2146350]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa19125 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa17523 | Splice Site, Nonsense | Available for shipment | Available now |
sa2824 | Nonsense | F2 line generated | Not yet available |
sa35985 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa19125
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016273 | Essential Splice Site | 53 | 722 | 3 | 17 |
ENSDART00000099234 | Essential Splice Site | 55 | 729 | 3 | 16 |
The following transcripts of ENSDARG00000018854 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 40822317)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 42338713 |
GRCz11 | 15 | 42295065 |
KASP Assay ID:
2260-8960.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTAGCTGTATAAGCATGTTGTTCAAATTGTGGAGAAGTTCATCAAGAGGG[T/A]ATGTAATAAACTATATATGTACAACAGCTTATCTTATACTAAAAATCTCA
Long Flanking Sequence:
TCTAGAAATGTGGTCAGAGAAGTTTAGTTGGTCATCAATCGTTACTCCAAGGCTTTTCACTGTTTTGGATGCAGTAATGTTTGCCCCATCCATCTGGATTGAAAAGTTATGATGTAGAGTCGGGTTGGCAGAAACTTCAAGCATTTCCATATTTCTGACCCTTAACAATACTTTATACATTTTCAAGTGCAAAATGACCCAAACATGATATTTTTATTATTTTTTTATGTGTCTGTTGTGGTCCAAACAAACCAGAATGTAAAGTGTTAATCTCTTTGTGTGTTGTCTGCTTATTGATTTTGACAATTGATCCTGAAAGTTCCTATTGACTTTTTTGTCCTCCAAAGCTGTTATCTCTTAGTAATGGTGCTTTTGCCTCTGACTGTATAAATACATTTGTTTGTATTTTAAGTACTTTGACTAATTTTTGCATCTGTGTGTTTTGTCTTGTTAGCTGTATAAGCATGTTGTTCAAATTGTGGAGAAGTTCATCAAGAGGG[T/A]ATGTAATAAACTATATATGTACAACAGCTTATCTTATACTAAAAATCTCAGTTATGAGAAGATAAAGACTAAATTGCTGTCGTTTTCCCCTTCAGTGTAAACCAGATCTTAAGGTTCCAGGTCTCTACGTGGTCGACTCCATTATCAGACAGTCCCGTCATCAGTTTGGCGCAGACAAAGATTTGTTTGGTCCGAGGTTTCTGAAAAACTTCACTGTAACTTTTCAGAATCTTTTCGAGTGTCCAGAAGATGACAAGGTACTGAATAACGGCATCCTGATTGTACAGTGAAATGTTTGTTTGTGGAGGTCTCATGGGTTTTGTTTGTTGAACTGTAGGGGAAGATTTTGCGTGTATTGAATCTGTGGCAGAAGAATGAAGTGTTCGGCCTGGAGATCATTCAGCCGCTGGTCGACATGGCAACAGCTCCAGTCCTGCCTGTTTTAGAAAATGGAACTACAGTCACAGGTAGATGAGTCAAATCAATGCCTTTCAGCAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17523
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016273 | Splice Site, Nonsense | 54 | 722 | 4 | 17 |
ENSDART00000099234 | Splice Site, Nonsense | 56 | 729 | 4 | 16 |
The following transcripts of ENSDARG00000018854 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 40822415)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 42338811 |
GRCz11 | 15 | 42295163 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCMGTTATGAGAAGATAAARACTNRAATTGCTGTCGTTTTCCCCTTNAGYG[T/A]AAACCAGATCTTAAGGTTCCAGGTCTCTACRTGGTCGACTCCATTATCAG
Long Flanking Sequence:
TTGAAAAGTTATGATGTAGAGTCGGGTTGGCAGAAACTTCAAGCATTTCCATATTTCTGACCCTTAACAATACTTTATACATTTTCAAGTGCAAAATGACCCAAACATGATATTTTTATTATTTTTTTATGTGTCTGTTGTGGTCCAAACAAACCAGAATGTAAAGTGTTAATCTCTTTGTGTGTTGTCTGCTTATTGATTTTGACAATTGATCCTGAAAGTTCCTATTGACTTTTTTGTCCTCCAAAGCTGTTATCTCTTAGTAATGGTGCTTTTGCCTCTGACTGTATAAATACATTTGTTTGTATTTTAAGTACTTTGACTAATTTTTGCATCTGTGTGTTTTGTCTTGTTAGCTGTATAAGCATGTTGTTCAAATTGTGGAGAAGTTCATCAAGAGGGTATGTAATAAACTATATATGTACAACAGCTTATCTTATACTAAAAATCTCAGTTATGAGAAGATAAAGACTAAATTGCTGTCGTTTTCCCCTTCAGTG[T/A]AAACCAGATCTTAAGGTTCCAGGTCTCTACGTGGTCGACTCCATTATCAGACAGTCCCGTCATCAGTTTGGCGCAGACAAAGATTTGTTTGGTCCGAGGTTTCTGAAAAACTTCACTGTAACTTTTCAGAATCTTTTCGAGTGTCCAGAAGATGACAAGGTACTGAATAACGGCATCCTGATTGTACAGTGAAATGTTTGTTTGTGGAGGTCTCATGGGTTTTGTTTGTTGAACTGTAGGGGAAGATTTTGCGTGTATTGAATCTGTGGCAGAAGAATGAAGTGTTCGGCCTGGAGATCATTCAGCCGCTGGTCGACATGGCAACAGCTCCAGTCCTGCCTGTTTTAGAAAATGGAACTACAGTCACAGGTAGATGAGTCAAATCAATGCCTTTCAGCAATTTGGTTTATACATGTTTTTTAAATTCGGCTTTGCTTTAAAGTTACTGTATCGGGCATTATGAACCTTTAGATTTACACTACCAGTCAAAGATATGGGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2824
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016273 | Nonsense | 413 | 722 | 12 | 17 |
ENSDART00000099234 | Nonsense | 421 | 729 | 11 | 16 |
The following transcripts of ENSDARG00000018854 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 40828379)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 42344775 |
GRCz11 | 15 | 42301127 |
KASP Assay ID:
554-3397.1 (used for ordering genotyping assays)
KASP Sequence:
CTGAAACCGAACGCTCAGCCCATGATGGGAGAGAGAAAAGACGCAGCAGA[C/T]GAACAAGATCAAGGTATRTTTAATGAACTTGAAATGTCTTAATTAAGGGT
Long Flanking Sequence:
GAAATGTCAGGACACCAGTTTGGAAAAAGTTAAGAAATTTTCAGTTTTGCATGAACTAACCCTTCAAACATGACGTTGAACGCTTCTTTACTTAAGGTTGAACATCCTTCAACTTGCAGTGCCTGTTAAAAAAAGATGTGCATCAACATAGACTCTTTCCATGTCTCTTACGTCACCTTCAACATACTCAGTACTGTCTGGTTTTATTATTTTTTTATCTGATTTTGGATGTTTCCATGTCCTCTTTATCAGAATTGAAAACGATTAAAGCACCAGTCATTATTTGAATAAAATTTTAGATCTGGTCGATTCATTTCAATTGGCATGGCAAAATGTGGCTTTTTGAATTTTTTGTTTGGACTGGGCTGCAAGTCTGATTATAAACTACTTATTTGAGTCCATGAAGCTTAAAAAAATGATATGGTGTTTTTGACTCATCACAGGCTGTAGCTGAAACCGAACGCTCAGCCCATGATGGGAGAGAGAAAAGACGCAGCAGA[C/T]GAACAAGATCAAGGTATGTTTAATGAACTTGAAATGTCTTAATTAAGGGTTGGATGACATAAGAAATAAAGTTTCAGGAAAATTACGATTTCTTTGTGTTGGTTTCACTATTCTGTACATTGTCGGAGCTTTACAACCAAACTAAAAAAAAAGGTTATGCAAGGAGCTAACACATCAAACAAAAAATAGGGGTAGAACAATTCTTTTGTTACTTTTTCAGTGACAAAAATAAAACACAGCAAAGATTCGCATTTCAAATTTATGTAATATACAAATGAATCAAACAGTGGTTTATTTTTTAGGTGCAGTAGGTGTATTGAACAGTAGCATTTAAGAAATTGAATCAAGGAATCGCTGAATAATTCAAATAAAAAAATGAACACTTAACTCTTAACGCGTATAACACCGATGTGATCAGTAAATTGATTTTAATAGGCTAAACCTTTTTTATTTTAAATTTTCTAATGTTTGTTATTTATTCTATCATTGGAAGCTAATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35985
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016273 | Nonsense | 463 | 722 | 13 | 17 |
ENSDART00000099234 | Nonsense | 471 | 729 | 12 | 16 |
The following transcripts of ENSDARG00000018854 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 40830183)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 42346579 |
GRCz11 | 15 | 42302931 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCGCACACGCTCTCGATCCAGAGAACGCAGAGGACGCTCTCCACGACCC[C/T]GATCTGAGGAGAGGAGAGATCGGGACAAAGAGCGAGAGCGGGAAAAGGAG
Long Flanking Sequence:
AGTGCTGGAGTATTATTATTATTATTATTACTTCCAGAACTGTCTTGAGCATGTGTCTCATGCCTCCAAAAACCACAGTGCGTTCAATGTGTTCATCTTTTGAGGCATAAACATTTATTATATTTGAAAATAGGCTCACTGTGGCTTCTTTTTATTTATTTGCAAATGTTTCACACAATATTCCAGATTTGTGCATAAATTTAATTCACATCTTTGCCTTAAACATGGCTACTGTAGCACAATACAACAACAATCTTTAAAAGCAGATCATGGAGACATTTTAACTGGCGCTGTTCAGAAATCATCATATCACACACCCCTACTTAATAAAAAGCTTAATTTCGAGTGCTGCATCTCTTTCCAGGTCTCCACATAGACAGTCGTCATCATCATCACGCTCACGAAGATCCCGGTCCGGTTCACGTTCCCGCCGAGAGCGCTCCAGGTATCATCGCACACGCTCTCGATCCAGAGAACGCAGAGGACGCTCTCCACGACCC[C/T]GATCTGAGGAGAGGAGAGATCGGGACAAAGAGCGAGAGCGGGAAAAGGAGCGGAGACAAAAAGCAGAGCCGTCTGTCAAAAAGGAAACACTCAGTGGTGAGAATACAAACTGATTTTATAGTAGTTATATCAGTGGGTTTCAAACTGTGGTACGTGTACCACTAGTGGTACGTGGGCTTACTTCTAGTGGTATGCGGAGGAATCACTGAGTAATGAAAGAAAAAAAGGAATAAAGTTTTAATCATTTGATGCATATGATAACACTACTGGTATCAGCATTGGCTGTTCTCTAAAGGCTACAATTAAAGCGATGTGCTTGAAATGTTTACTTTAGTGCATCACGTCATCAGCTGCTCAATCCTATTGGCGCAGAATTAGAGAAAGAGGTGTGTGGTGCTTGCAGAGCAGATAAGCGCTAGAGCAGTGGTCCCCAACCCTCGGGCCACAGATCGGCACCGGTCTATAGATCCATTGCTACCAGGCCACACAAAAAAGCATTT
Associated Phenotype:
Not determined