ZMP
si:ch211-251d10.5
Ensembl ID:
ZFIN ID:
Human Orthologue:
CUX1
Human Description:
cut-like homeobox 1 [Source:HGNC Symbol;Acc:2557]
Mouse Orthologue:
Cux1
Mouse Description:
cut-like homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:88568]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21765 | Essential Splice Site | Available for shipment | Available now |
| sa21764 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21765
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081170 | Essential Splice Site | 262 | 1495 | 9 | 26 |
| ENSDART00000136245 | None | None | 223 | None | 5 |
Genomic Location (Zv9):
Chromosome 10 (position 33939826)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 33041175 |
| GRCz11 | 10 | 32985035 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCCAATGAGATTGAAGCGGTGATGACAGACTTGGAAAGAGCCAATCAGG[T/C]AAAAGACCATATTCCTCATGGAAAAGCCACTCGTATTTCTATTGTATGCA
Long Flanking Sequence:
CAGTCCAGCGGATTACTGTGAAATCGAGAGGGCTTAATGGCCCTGCGTGCGCGCGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATGCGGGCGAGTGTGCAAGTGTTCACATGCATGACGGGGTTATGGAAGTCCAAGCGCAACGGCTGATCTCTACACAACAACACACACATACCCAGATGCTTTCATGATGAATGCTCTCACGAACACGTCTCGTAATTGCATATTCACACACGCAAGCGGCCCAGAAGTGAGGCAAGATGCTGATTACCCGTTTTATGTTGATGTGAGGTCTTCTGTTCCACCTGGTCCCGCTCTTTACGTGACCCATTTTGTTGCATTGCGTTTGGTTGCATCATTGTGTTTCACTGCAACAAACCTGCAGCACCATTTCCCTGCTGTAATGCGCGCCGTCTTTTTTTTTTCCCTTTCTTTTTTTAACAGGGCCAATGAGATTGAAGCGGTGATGACAGACTTGGAAAGAGCCAATCAGG[T/C]AAAAGACCATATTCCTCATGGAAAAGCCACTCGTATTTCTATTGTATGCAAATCTGAGACACAATAACAGCTTGTTTTTATTATTAATATCTTTGGGCTGATGGACTGTACAGAAGTTGCAGTGCTAGTTTGCACATTTCTTTTATTAGCGCGCACGACTTTATTGGAGTCACATTTATTCAAGTTCCACATATCCTAATTCTCCCCATCTGCTTTCCTTTTGGAAGAAATCCATCATTCCCTTGCACTTTTTTGAGCTCTGAGCCCCAGCGGCTAAATCTAAATGGATGTTTTTACATCTTTTATGTGATGCAATTTAAAGAATCTCTTGCATTTATATAAATATACCTTATTATAAAAATGCATGTGGATCCGTTAGTGTATAACTACTGATGACATTTATTCTAAATTAATAAAATAAAATATGTTGTCATTTAGATCATTTTTTAAAAAGTTAATTGTTATTACTGTATAAATTTTTTAGGCAACATTAATGCTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21764
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081170 | Nonsense | 1120 | 1495 | 23 | 26 |
| ENSDART00000136245 | Nonsense | 35 | 223 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 10 (position 33875379)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 32976728 |
| GRCz11 | 10 | 32920588 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATCCCCCCTGAGCTCGGCTGAGGAGTCTGTGAAGAGCCAGCAGGAGGAG[C/T]AGATGTGCCGATCCTCCGTCCAGGAGCCCAGCGAAGCCTCCGAGTCTCAG
Long Flanking Sequence:
TAAATTAGGATAAAATAATAAAAAATATTAATTGCACAATTGCAAAGATAAAATTATTATTAAAAATATTTAATAAATAGAGGTTAATCACTAATAAATACATTTTTATTTATGATTAAACAGTCCCTTTAAACCCAGAAAGCTCTGTATGCGTGCCCCACATTGAGTCTCCCGTCTTCCTTAATTTATTTGTCTCATTATGCTCGAACAGAAGCTGTGACTTGGCATGACACGATGCATCTGTCACTGTCCATCACTTTCTGTTGCTGAGCAGGAAGACCTCGGTTTGGGGTTACGCTTTCATTGGCTTCACCCTCTCCATATTTAGACTGATCTTCATTCAGGCCTTCTGTCGATAAGTAATGCCCGGCTCACTGGCGCAACGTCTTAACGTCTCCCTTTCCACAGAAATCACCCCCAAAACCTCGGCCAGCTGCAGTCCTGCCCCAGAATCCCCCCTGAGCTCGGCTGAGGAGTCTGTGAAGAGCCAGCAGGAGGAG[C/T]AGATGTGCCGATCCTCCGTCCAGGAGCCCAGCGAAGCCTCCGAGTCTCAGCCCGGGACGCCGCTGCCGCTGCCTCTGCCGGGACAGGCCGGTCTCAGCATTCAGGAGATGGTGGCCATGTCAGCCGAGCTGGACACGTACGTCATCACGAAAAAAGTCAAAGAAGTCCTCACTGATAACAACCTGGGTGAGTGTGTTAGCAAAACAGAAGATGATCAGTGTATTGTTTTTATTATTGCAAAGAGATATAATTCACAACATCAAGGCAAGACAGGTTTGTTTCAAACGCACTTTTCATACACAAAATGGTCATTCAAAATGCTTTACATAAACAAAAATTAAATAAACAAGGAAATAAAAACGATTAAGAGGATTGAAACGTATTAAAAACATTTAAAATGTGTTAAAACAGGTTATAGAGCAATGAAAAAGAAAAGAAAGACCCAATAGTGCGATCTGTGGGATGTCGCACAGTGCTCATTCAGTAAAATAACAGCTAAA
Associated Phenotype:
Not determined