ZMP
si:ch211-127h20.2
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate Rap guanine nucleotide exchange factor (GEF) 1 (RAPGEF1) [Source
Human Orthologue:
RAPGEF1
Human Description:
Rap guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:4568]
Mouse Orthologue:
Rapgef1
Mouse Description:
Rap guanine nucleotide exchange factor (GEF) 1 Gene [Source:MGI Symbol;Acc:MGI:104580]
Alleles
There are 9 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14124 | Nonsense | Available for shipment | Available now |
| sa17359 | Essential Splice Site | Available for shipment | Available now |
| sa10846 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14124
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064017 | Nonsense | 249 | 1085 | 6 | 25 |
| ENSDART00000139947 | Nonsense | 241 | 1077 | 5 | 24 |
Genomic Location (Zv9):
Chromosome 8 (position 12348729)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 11793492 |
| GRCz11 | 8 | 11831197 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGAGGAAGTAGCCCCTCCGAAACCCCCTCTACCTGGACTCAAAGTGCCT[G/T]AACAACACTGGTACKTAAGCTTTACTTGRCTTTCACCACAATAACATTTT
Long Flanking Sequence:
GTTTACTCACACTTCACTTGTTCCAAACCTGTTTGACTTTCTGTCTTCCATTAAACACAAAAGAAGATACTTTGAAGATTGTTGGAAACCTGTAACCATTGACTGCCATCATATTTGTTTTATACTATGGAATTTAATGGATTCAGGTTTTCATTTTTCTTAATAATATATTTAATAAAGAAATAAAATAATAAAGGTTTGGAACAAGTGATGAGTAAATTACATAATGTTAATTTTTTTGGTGAACTTTCTTTTTAAATACAAATAATATGGATAAAATCCACCTGTACATGCTGTGTATTGTGATGTGTCAGCACTAATACTGTTATTCATTTTTACCACATTATTATGGCAGTGTCCCTGAGCCCCCTGTCATTGAGACGAAGGAACCCATCTTGAATGACAGCCCTGCCCCAGCTGAGAACATTGAGACCCCAAATGATGTACCTGAGGAGGAAGTAGCCCCTCCGAAACCCCCTCTACCTGGACTCAAAGTGCCT[G/T]AACAACACTGGTACGTAAGCTTTACTTGACTTTCACCACAATAACATTTTCAAAAACAATAAGTGATTTCATTTTTTTTCCTCTTTCAAATATTTTCCAAATTATGTTTCGCAGAGGCAGGATTTTTTCACAGTATTTCCAGTAATATTTTTTCTTCTGGAGAAAGTCTTATGGTTTATTTTCGCCACATAAACAGAGTTTTAACATTTTTTCAACCCCATTTTAAGGTCAGTATTATTAGCGTTTTAAGCAAAGGTTTTTTTCTACAGAACAAACCATCGTTATGCAATGACTTGCCAGCTTATCCTGACTTGCCTAATTAACCTAGTTAAGACTTTAAATGGCACTTTTAGCTAGTATCTTGAAAAACATCTAGTAAAATATTATGTACTGCAGGGATGCTCATAATAACCGATTAACCGTTAACCAAAAGGGTGCTTTTCTAACCAATTTATGGTATCAGTTAAACAATTAAAAATATCATTAGTATTTTATTTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17359
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064017 | Essential Splice Site | 480 | 1085 | 9 | 25 |
| ENSDART00000139947 | Essential Splice Site | 472 | 1077 | 8 | 24 |
Genomic Location (Zv9):
Chromosome 8 (position 12335117)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 11779880 |
| GRCz11 | 8 | 11817585 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
RCAGATCCCCCAGAGCCCCCCACCCCTGCCGGAGAAGAAGAGTCGCCAKA[G/T]TGAGTATAAAGAATTCAGAWGGGTTGTTTAGAGGAYTGCAAATCACTGGG
Long Flanking Sequence:
TCATGAAGTTGTGAATAAAGTGAGAAATGTGATATGAATGGGTACATTTCTGAGTATCTACTTTCAAAAAAATGAATGATTTTTATCTTCTCTCTCTTTTTTCCTGGCTTATTCAGACACAGCAGAGAGCTACGACCCTGACTATGACTTCTTGCATCAAGACCTGTCCAGCACTGAGCAGATCCCTCACACACACACAGGGGGTTGTCTGAGCCCCCTCCCCGAATCTCTCCACGAATCTTCCTCATTTCCAGTCCAGCACCAGTCGATGCCTCCTGCCCTCCCGAAGAAGGAACGGCGGCCACCTCTGCCTCCAGTGGAACGACTCTACTCTCAATATGACAACGTTCCAGATGAGGACATGCACACTCCACCCTTCCCTCTCTTCGGTGCAATCCCCCCCTCAAACCCTGGAGTATTTATGGGGAACTTCGGTCCCAGTGAGAACACACAGATCCCCCAGAGCCCCCCACCCCTGCCGGAGAAGAAGAGTCGCCATA[G/T]TGAGTATAAAGAATTCAGATGGGTTGTTTAGAGGATTGCAAATCACTGGGTTACAGAGACCTGTCTAGTTGGAAGTACAGCAGTTTTGGTGAAAGTCTTCAATTTTGGTTCTTTCCCTTTTATTTCCCTTTTAGTTTACTGTAATGACAATTTTCAGTTCCGTTTTTTGGCAATAAATGCAAATAAGGCCAAAAATGTAGAGTTGCAGAAAAAAAGAAGTCATGAATAATTTAAACTGAAAAAACTAGGGATGCACCGGTACCAATTTTTTTAGAACTGATCTGATCCCGATAACAAAGTTCTGAGTATCGACCGATACAGATTTGATCCCGATACTGTGCCGTTTTTTTTTAAAGCATAATACAGTTTCTATAGTTCTAGTGTGAATGCAGCTTCATCCAGGGTCATCCAGGTACTCCGGTTTCCTCCACAGTCCAAAGACATGTTTTACAGGTGAATTGAATAAGCTACATTAGCTGTAGTTTTTATGTGTGTGGGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10846
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064017 | Nonsense | 603 | 1085 | 12 | 25 |
| ENSDART00000139947 | Nonsense | 595 | 1077 | 11 | 24 |
| ENSDART00000064017 | Nonsense | 603 | 1085 | 12 | 25 |
| ENSDART00000139947 | Nonsense | 595 | 1077 | 11 | 24 |
Genomic Location (Zv9):
Chromosome 8 (position 12317643)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 11762406 |
| GRCz11 | 8 | 11800111 |
KASP Assay ID:
2260-0229.1 (used for ordering genotyping assays)
KASP Sequence:
TGACGCCTGCCTGTGCTTKTGCTGTCCTCCCTCTTGTTTTYCTGTAGAGC[G/T]AAAGTGCTAATGATGAAGGTGGGGAGGGTGAATACGTCAATCTGTATTCA
Long Flanking Sequence:
CCCGCTCAGTCTGACGTCAGTCCACTTGTAATGTAGCCGACTGCTTTTATTATAATTGAGTAATATAGTTTTATTGCATAATAAATGTTGCTTCCAGTTTAGACACTTTGTTAGGCTAATAACAGATATCATCTGCTGGAAGAATTGTTTAATGTAATAGCCCTAAACAAATGTGATTATTTATTGTGATGTTATTGTTCATCCTATTTCTTTTGCTGCAGTCGAGGCACTCTCAAGGCCATGGATTTGCAACAATTAAGTGTGTTTCTGGCAGACTACTCAACATGTGTAGTAGACTCACTATAACGCTCTTCTTCTTGCCAGGTTTCCAGGCGCCAGTAATGCAGGATCTTGCTTTGCAAAAAAGTGTCTTTTAATTTCAACCCCGCCAAAAAAGCAACAGTGTATTTGAGCTGTTTTTCAGCTCCCTTTTGGCCATCAGCTTTACTCTGACGCCTGCCTGTGCTTGTGCTGTCCTCCCTCTTGTTTTTCTGTAGAGC[G/T]AAAGTGCTAATGATGAAGGTGGGGAGGGTGAATACGTCAATCTGTATTCATCCAACCAGGCCAATGGAGATGTGACTCTCTCCAATGGAGTAAGTAACAGCATGTCAGCTGTCGGTGGCCTCACATGCTGCGTTCTGTGCTGTTTGTGACTGTAATGCTTGGCTTTGCTTCATGCAAACTGGATAATTGCTATTTTACTTAACGCTTGCCGCCAAGGTGCACTCTGCGAGTGCTAAGAATCAACAAACAAGAAATATCTTGCATGTTAATCTGAGCCTGTCCTAACTAACAGCGTCTGGCAATATTGTTGCGCAAGACAATATTGTTTTATGCTTGGTGGCTTCGTCTTGTGAAATGTCATTGGTTCAAAATCCTGCTTTAAATGTTGGATATTAAGTGTCTAGTAGGGCTGAACGATAAATCGAATGTGATTTTTGTGCCCATTTGTTTATAAAGCCGTCTCTTTTAATCAGTTGTGAATCTCCATTAGTGTGTTCTTG
Associated Phenotype:
Not determined