ZMP
zgc:153957
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC570194 [Source:RefSeq peptide;Acc:NP_001077320]
Human Orthologue:
KDM4C
Human Description:
lysine (K)-specific demethylase 4C [Source:HGNC Symbol;Acc:17071]
Mouse Orthologue:
Kdm4c
Mouse Description:
lysine (K)-specific demethylase 4C Gene [Source:MGI Symbol;Acc:MGI:1924054]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39604 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa19486 | Nonsense | Available for shipment | Available now |
| sa12098 | Nonsense | Available for shipment | Available now |
| sa24842 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa39604
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087729 | Nonsense | 116 | 1482 | 4 | 22 |
The following transcripts of ENSDARG00000061504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 20776277)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 21248373 |
| GRCz11 | 1 | 21941310 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATGTGTGCTCTACCTCCTCAGGTACTGTACACCGCGCTATCTGAACTA[T/A]GAAGACCTGGAGAGGAAGTATTGGAAGAATCTGACATTCGTCTCGCCCAT
Long Flanking Sequence:
AACAAAAATGTAATAAAATGTAAAAACATTTATAATTTCTACATCAAATCTTGATTATTTCCACAGGTAATTCCACCCAAGGGCTGGAAGCCACGTCGCAATTATGATGATATTGATGATTTTGTTATTCAAGCACCTATTCAGCAGATGGTAGCTGGCCAATCAGGACTCTTCACCCAGTACAACATCCAGAAGAAGCCGCTCACTGTGCAAGAATTCCGCAGACTGGCTAACAGTGACATGTAAGTGATTAAAACAAGTGTACATGTATAGTTGGTTCAGAATATGTACATGCAGAATAGATTCAGTGTGTTGTATGCACATTCTTAAAGTTAATCCTATTTTCAGTCATAAAAAAATAGTTTTTTATATACATTGTTGTTTTCTGCAACAATACAAAACTGACTGCACTCTGTATTAACTTTCACTCAATTATGGATTGACCATTGGAGATGTGTGCTCTACCTCCTCAGGTACTGTACACCGCGCTATCTGAACTA[T/A]GAAGACCTGGAGAGGAAGTATTGGAAGAATCTGACATTCGTCTCGCCCATATATGGTGCTGATGTGAGCGGCACACTCTATGATGAGGTGAGCATGCAGATAGAGCACAGCTCAGGTTAACTAACATGAACTAATAATGTGCAACATCAATGTGTTTATTAACCTTAGATCATATTAAGTTGGATTGTAAGGTAGTTCACAGTGCATAATTAATGTTAACTGATACAATTTTAGATTTTTAAGAGAGTGCAATAGTAAATATTGGAAATGAACAGAAATTTAAATTGCTGTAGAAATCTTTAGCATTGTTGCTTCATGTTTAAGTGAAAGGTAACATTAAAATTTTACTGTAAAGTTTTAGAATTAAACAAAATACTTTGTTTATTCATTCAAAAAACATTTTAAGGTCTCATTCCATTTTTTTATGTAATTTGCCATAATAATCAGTGCTTCCCACACATAGACCTTGCTTAGGCAGGCCTCCCAGGTACTAAAGTCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19486
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087729 | Nonsense | 330 | 1482 | 9 | 22 |
The following transcripts of ENSDARG00000061504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 20782191)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 21254287 |
| GRCz11 | 1 | 21947224 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATATGGTGAAGATCTCCATGGATCCATTTGTTAGACGATTTCAGCCGGAT[C/T]GATACGAGATGTGGACGCAAGGCAAAGATTCATGCTCCCTGGATCACACT
Long Flanking Sequence:
ATGCTGTTTTAGGAACTAATTAGTTTTATTTGTAATTTGATGCAAAATGATATAATACAAAGAATAGCTTTCTAAATGTACATAATTCTTTTGAATCTAGATTTTTTAAAGAAAATATATCTTCTTTTGAAAAGGATTCATAGATCCTACACTTTAAAGTGCCTGGTCAATAGGCAGAGAGAAGGCAGTCTTTTGTGGCTGTTTTATTGCATTCAATCAAATGAATCTTTGCACTACAAAACCAATATGATTGAGTTTCTGCAAGTGGTTTAAAGTGGATGAGTTCAATATTTTCAAGCTTCTATTTACATCTGTATTTAGCATTGCCCACTTATGATAGAATAAACAAGTCATAGACAGGGCCTCTGACATCTTCATGTTACCTTACAGCTAGTGAACATTTGGCTTTTTGTGTGACATCTTTCCCCTTGCAGTGTACATGCAGTAAGGATATGGTGAAGATCTCCATGGATCCATTTGTTAGACGATTTCAGCCGGAT[C/T]GATACGAGATGTGGACGCAAGGCAAAGATTCATGCTCCCTGGATCACACTCTGCCTACACCAAGCACTACACCAGAGCTGCAGAGCTGGCTTCAGAGACGGCGAAGGAAAACACCCTCCACCAGGTATCATCAAGGTGGATTGTTGAGCTGACCCAAAAATGTAAATTCTGTTATAGGAAAACACATGAAGATATACTATATAGCTGCAGGTTAACTTTGCCTATATAATAACTTGCAAATATATAATAACTGTTAAAAGCTATAAGTTACTAGTTAATTAAAGTAATTAGCAACTAAAGGGTTATGAGAAGTAATAACTTGCCTTTTTAATTTTAATTGTACAATGTGCACCTTTTGTAAAGCTACTTTAAGACAAACATTATTATGGAGAGCGCTATACAGTACAAAATGAGCTTGAATTGAATTGAATATTTGATGTTTCTGTCTCTTTAATAAAAGAAAAATTAGCAGTTTAATACTAGTTTTCTGAAGAGACAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12098
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087729 | Nonsense | 534 | 1482 | 11 | 22 |
The following transcripts of ENSDARG00000061504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 20785128)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 21257224 |
| GRCz11 | 1 | 21950161 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGAYGTGACTYTAGGCTCAGAAAGAACTGCTRAGAATCCTAATCAAACAT[T/A]AAACTGTGAATCTGTCTYAGAAAYCATTGCACCTTCTATTCCTGTGACCC
Long Flanking Sequence:
AACAAACTTTTTTCTTTTCAGTGAATTAACTTGCACAGATTTATTGTTCATCTAAAGAATAACAATGTGCAATACAAGCATTTCAAGTTTTCATTTCACACAGACTTTAAGAATAGTGTTTGACATCTGCTTTATCTCAGAAGACCTTTTTTATTGTTTCCTGACACATCTTTCATCTGTTTTAGGGCTTGCTGGTCGACAAATGTGTGTTGTTAAAGTAACAAGAGTGGAGAGCGACTTGCTGGCACAGTCTACAAGACAAGTCAAAGAAGCTTCCCCTGAGCGACTCTTGACCCCTACTCTCACCACCACATCCAGCCAAAATGACCCTGATGCGGGCCACACAAGCTCCCAGACGTCTTTAATATTGGATGAAGGACAAGTATCCAAAAACACAAACTCCACCGCCCAGTCTGAGCCTGAATCAACCTCAGAGAGTGACATCATTGTGGATGTGACTCTAGGCTCAGAAAGAACTGCTGAGAATCCTAATCAAACAT[T/A]AAACTGTGAATCTGTCTCAGAAACCATTGCACCTTCTATTCCTGTGACCCATTCACTTACACTCCACTCCACTGGTGCTACAGTTTTATTTTCGGAAAGTGATTCCCAACAAGCTAAAATTGAAACGGAAGAGACAGTCATTGATACCTTGACCGAGGACAGCATCGATTGCGGCACGTCAGCACTTTACAAGGAGCAAAGCTCAATCAGTCTAGACCCTGCTCTTCAGGGTTCAGAACCTTCCATGAATAGAACAAACTCTGAAATCCAAACTACGCCATTTTGTGAAATGCCTCTTCTAATGCCCGAGCTCATTGAAGAGAGAGTCAATCCTCAGTGTCTCGCACCTGAAATGCCCTCGCTGACTCTCGCTATCCGACCGGACTCCGCAAATCATCAACCTTACAACAGTGCACCCATCCTCCATTTGGAAAAATCACACTCACCTCCTGTTATAACGGATGAAGTGAGAGGTTGTTCTGAAAGAGTTTGTCCGGATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24842
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087729 | Nonsense | 866 | 1482 | 11 | 22 |
The following transcripts of ENSDARG00000061504 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 20786123)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 21258219 |
| GRCz11 | 1 | 21951156 |
KASP Assay ID:
554-7764.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGCCCATGATTCGTTACCGTACACCATGTGGTCAGAGTCAGGGTGCCAA[C/T]AAGAAAAGTTCTCAGATTCTCCAAACTCTTCACCTCACACCCAGACCTGG
Long Flanking Sequence:
CGGATTGGCCCTTTATTTTACCAAAAGAAGGTGTGAGCCAATCACATAAGTCAATCTCAGACAGCTTCAAAGCAAAACCAACATCTGCTTCCTTTGCTCCACAATGGGGGACGCCAGAGGAGTCCAAACAAGAAGGAAATATACACAAATGCACATCAACAGACCAGACCACTCAACATGAATCCGTTTCGAACTGTACAACCCCTACTCGCAGTATTTTGCAAAGTTCTGCAACAACACGCATGGATTTTATAGACTCTAAAATGATTGAAGGAGTGGGCAAAGAAACTTCTCGATGTATCGAAGAGCAGTCCAGCTCTCTCACGTCCTCCCAGAGCAACTTTGCAGAATCCAAACCCTTCACAATTTGGAAAAACCTCAGCTCCGATAACCCTGCGGTGCTCATCGAGAGTTTGCAGCCCGAGTTGGTAGTAGGTCTTACCGCAGACTATGCCCATGATTCGTTACCGTACACCATGTGGTCAGAGTCAGGGTGCCAA[C/T]AAGAAAAGTTCTCAGATTCTCCAAACTCTTCACCTCACACCCAGACCTGGACCAACCTGGAGCCCATTCCCATGCAGTGTTCTGATACAGAAGTGTCTGAAAACGCACCCTTAGATCTTAAGCAGGAGAACGAGGAGGTGGAACCGGCTGAATCGTGCGAGCTGAATGAGCAGGCGGGCTCTCAGGAACCTCAGGAAAGAGAGTTTAAAATTCAGGAGTATTACAGAAGTGTGAAATCAGAACACGATGGGTCTGTGAGCGACTCCGATTCGTGTGAATCAGGAGATAAGGGTGCTGACAGCAGCAGTGAATCCAGTGAGGAGAACCCCATGAGTGATCCAGAGTATGTGGAAACGGGTCTGGAACCAGGGGAAGTCTGTACAGTGAGTTCTGGTGATACACTGTGACAATCAATGCATTCTGTGTTCTGTATTGTTCTTGGCGTCTGTTCTGCCCAGCGTTATGACAAGACACTGGCACCCACTTTATATTAAGTGTCT
Associated Phenotype:
Not determined