ZMP
cpne2
Ensembl ID:
ZFIN ID:
Description:
copine-2 [Source:RefSeq peptide;Acc:NP_001038540]
Human Orthologue:
CPNE2
Human Description:
copine II [Source:HGNC Symbol;Acc:2315]
Mouse Orthologue:
Cpne2
Mouse Description:
copine II Gene [Source:MGI Symbol;Acc:MGI:2387578]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25060 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa1882 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa25060
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000021213 | Nonsense | 79 | 563 | 3 | 16 |
| ENSDART00000143475 | Nonsense | 61 | 131 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 18 (position 17330991)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17682757 |
| GRCz11 | 18 | 17671823 |
KASP Assay ID:
554-7562.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAAATTAAACAAAAAACATATTCTATTTTTTATGTCTTTTCAGCTGGCT[C/T]GAACAGAGACGGCTATTAATAACCTGAATCCAGTATTTGGGGTAAAATTT
Long Flanking Sequence:
CGTATTTATTTCTAACAGTGTAGACAGGTTAGGCTAATGAGGCAAGTTATTGTATATTGATAGTTTGTTCTGTAGATTATCGAAAAAATATTGCTTAAAGGGGCTGATAGTTTTGACCTTAAAATGGTTTTTAAAAAATTAAAAACTGCTTTTATTCTAGCCGAAATAAAACAAATAAGACTTTCTCCTGAAGAAAAAATATTATCAGACACACTGTGAAAATTTACTGAACCTGTTAAACAACATTTGGGAAATATATAGTAAATATGTATATATAGTATCAGTACAAGCAACAAATTCCTCTCACTCATCTGACTGATATGTGCATATCATGTGCTCTTTTGTATGTAAAAATAGTTTATAGTTATGTCAATCTTATATGACAACTTCTCCACCAGTTAAAAATGTTTAATAATGTATAACTTCATGTTATCTTTCTTGACCCTTTTTTAAAATTAAACAAAAAACATATTCTATTTTTTATGTCTTTTCAGCTGGCT[C/T]GAACAGAGACGGCTATTAATAACCTGAATCCAGTATTTGGGGTAAAATTTCAAGTGGATTACCACTTTGAGGAGGTCCAGAAGCTGAAATTTGCCATGTTTGATGAGGACAAATGCAGCTCTCAGCTTTATGAACACGACTTTCTGGGCGAGTTCACCTGCACATTGGGAGTGGTACAGTAGCACTTTTTAATCAATAACATTTTACTTACTGCTATGGAGTAAATAAGAAACTATTTAAAAAATGTCTTTATGGTAATGTATAAGGAAAATGTTGTTATCTAGAGCTTCAATGGGGTGTTAAAATCATTAAAAAAGTATTATGGTTTCTTTCTGAAAAGGCGGTATTGATGTTTTTGTCCAATGAAAGTTAAGAAAGCAGTATGTGGTGGAATAAACATCATTTGTTTGTTAAAAAAAAATGTAATCAGACATTATTAATGCAACAAATGTTCCCATTTTACTCAAATCCATACTTTAAAACACAAGTAAATATAGTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1882
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000021213 | Nonsense | 200 | 563 | 6 | 16 |
| ENSDART00000143475 | None | None | 131 | None | 4 |
Genomic Location (Zv9):
Chromosome 18 (position 17332037)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17683803 |
| GRCz11 | 18 | 17672869 |
KASP Assay ID:
554-1872.1 (used for ordering genotyping assays)
KASP Sequence:
TTTTTCAGGACTTTTTTGGTAAATCAGACCCTTATTTAGAGTTCCACAAA[C/T]AAGGGGATGATGGGAAATGGATGATGGTTCACAGAACAGAGGTAAGGTAT
Long Flanking Sequence:
TATATGCTGCTTGGCATCACCCTAATTAGATAATCTCAAGTAATTACCATAAGCTTTTATGATCATAATTATGATAAATTAGCTTTCTGTATCGCCTCTACTTGTGCATTTATTGGGCCATCTGTTCTGTATTAGATCGTGTCAAATAAGAAGCTGCATCGACCACTGATTCTGGCTAATGGCAAGCCGGCAGGGAAGGGGGCCATCACAGTAAGATCCCGCATAGCACACCAGAACTGACATATGCATTGATAGAGTTTGTACGAGAGCTTCACGATCTGCTTGGTTTGGTCTAGATAACAGCGCAGGAGTTATCAGACAACAGAATAATCACCCTAACCATGTGTGGGAGGAAGCTGGATAAAAAGGTGAGTTAAGAGCTTTTGATAGCCATTCAAGCACTTCACAAAAGCACTCGTTGAAAGAAGATAATGATTTTGTTTGTGGCTGTTTTTCAGGACTTTTTTGGTAAATCAGACCCTTATTTAGAGTTCCACAAA[C/T]AAGGGGATGATGGGAAATGGATGATGGTTCACAGAACAGAGGTAAGGTATTAAATAGATACCGTGTTGGTGATATTCTCATTTATGTAGACCAGGGGTCTCAAACTCGCGGCCCGCGGGCCATTTGCGGCCCTCAGTGCAATATTTTGTGGCCCGCGCCGACCGCTGTACACTGACAGAATCAGCGGAGCGGGGAGAGAGAGCGCTTCCAGCTCCGCTGATTCTATCCGTACACAGCGGTCACTGGCATTCCCCGCCCGCCGTGTAAACAAAGGAGCGGGGATGCCGGTGACGTCACCACGCACCCCGCCTCTTTGTTAGACGCTGTGACGGGCGGGAAGAACCAAGGTAAGCTGTTCCCGCCCCTGCCTGCCACTCAGCTACATGCTGCATATATTATAGGTAGATACAGACTGGTACAGACTGATGTGACTGGAGTGGGGTGGGGGTGTTTTATTTATACATATATACGCCTTTTTTTTAGGTGAGGGAATGGAAGTT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |