ZMP
srebf1
Ensembl ID:
ZFIN ID:
Description:
sterol regulatory element-binding protein 1 [Source:RefSeq peptide;Acc:NP_001098599]
Human Orthologue:
SREBF1
Human Description:
sterol regulatory element binding transcription factor 1 [Source:HGNC Symbol;Acc:11289]
Mouse Orthologue:
Srebf1
Mouse Description:
sterol regulatory element binding transcription factor 1 Gene [Source:MGI Symbol;Acc:MGI:107606]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa33346 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa18770 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa33346
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092665 | Essential Splice Site | 277 | 1104 | 5 | 25 |
Genomic Location (Zv9):
Chromosome 3 (position 62735165)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 61837319 |
GRCz11 | 3 | 62073959 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATTACAACACTCACGTCTACAGCGCCGGTCCAGAACACCCCACTGCAGG[T/C]TCCCCCGCACACACATTCACACTAAGAATAACAGGAGGGCAAAAAACATT
Long Flanking Sequence:
GTCTGCTTTTGAAATATCTGTTAATATTCACCCCCTAGTGGCCGTCATAGGGAATTTATTAACAACATTATTTATTTTTTATTTAATTAAATATATCCTTAACTTGTTTGTCATTATATATTCAGATATAGTTAGTGTTTAGTGTTGAATTTATGATATTTATACATATTTATACATATGTATAATATACTGAATAACAATAATGGTCACACTTTACAATAAGGCTTCATTATGTATTCACTAATGTAGTAATAATGAGCAATATTTATACATGTTTTAATATATTTTCTGAGCATTGTGTGTGTTTGTAAAGCAGCTTTACGTGCCGGTGAGATCATATCATGTGTTTTTGCAGGTTTTGTTGCAGCCGCAGTTCATTAAGGCCGACTCTCTATTGCTCACAACTCTGAAACCGGACGTGACAATGGTAACGACAGTAGCATCGCCCTGCATTACAACACTCACGTCTACAGCGCCGGTCCAGAACACCCCACTGCAGG[T/C]TCCCCCGCACACACATTCACACTAAGAATAACAGGAGGGCAAAAAACATTGACTGCCATGTAGAATGCGAATTTAAATAAAGAAATGTATTGTTATTTTTACACTTTGCATTGCGGTTTTACATATTACACTTTAAATTGCATGTGTATTATGTAAAAACCGCAATGTAAAGGGTAAAAATAGCAGGTCCATCTCAGTTTATTTGGTAAGTGTGACCTGCTGATTCCAATATTTACTGATTCCAATTTTTTTCTAAAAGAAGAGAAAAAAGAGGAATCTGAATCGTCAAATATCGGTATCGGCAGGTCACACTTACCAAAAACACTGAAATCAGAATCAGTAAATATCGGTATCGGCAGGTCACACCAAAAAAAAAGGAATCAGTAAATATCAGTAATGGCAGGTCTTGCTTACCAAAAAAACTGAAATCGAAATTGTCAAATATCGGTATCGGCAGGTCACACACACACACAAAAATGAAATCGAAGCTGTCAAATATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18770
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092665 | Nonsense | 853 | 1104 | 16 | 25 |
Genomic Location (Zv9):
Chromosome 3 (position 62725893)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 61828243 |
GRCz11 | 3 | 62064883 |
KASP Assay ID:
2259-4263.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACCCGCACTCTAAGTGGTGGTCTTCAATGGTGGTGGTGGTCATTAATTG[G/A]CTGCAGGGAGAGGACGCGGCGGCCGAGAGGCTGTACCCTGCGGTGGAGCA
Long Flanking Sequence:
GTGGAGTTTGTAACCAAATTTGAGTCATGTTTAGTTGCTAAATGTAATAGAAGTTCATTTTGATGCGACTTTATTTTGCATTCGCTGCCCGTAACGCTTTTAAATCTGCCTCATCTGTGTTTATTTGAATATAAGTGTATTCATTTGAGTGTGTGTGTGTGTGTGTGTTGACAGCGAGTTCTCCGACGCTCTTGAATACCTGCAGTTGCTGACCAGCGCTGCTGATGCAGCCGGAGCCACGACACAATCCTTCGCCATCGGCTCCAACATGGCCACCGTCACAGGTCAGCTTCACACACTGCTCTATAATATCCACACATCAGAGAGTAACAGCACTGCTGGCTGAAGGGAAGACATGGGGACGGGGTAAAAAGCAGCAACTGGGCCTAAAGTTTCACTGAAGCAGAAGTGTGTGTGTGTGTGTGTGTGTGTTCTTGACCTCCAGGCTGTGACCCGCACTCTAAGTGGTGGTCTTCAATGGTGGTGGTGGTCATTAATTG[G/A]CTGCAGGGAGAGGACGCGGCGGCCGAGAGGCTGTACCCTGCGGTGGAGCATTTACCACGCAGCCTGCAGTCCGCCGAGTGAGACGCTTCCCCACACTCTGTCTGTCTGTCTGTGTGTGTGTGTGTGTGTGTGTTTATCTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTGATGTGTGTGTGTTTCTGTTGTATGTGTGTGTGTGTGTGTGTGTTTCTGTTGTATGTGTGTGTGTGTTTCTGATGTGTGTGTGTGTGTGTGTGTTTGTTTCTGATGTGTGTGTGTGTTTCTGTTGTGTGTGTGTGTGTGTGTTTCTGATGTGTGTGTGTGTGTGTGTGTGTTTGTTTCTGATGTGTGTGTGTGTTTCTGTTGTGTGTGTGTGTGTGTTTCTGATGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTGTTGTGTGTGTGTGTGTGCGTGTGTATGTGTTTCTGTTTGTGTGTGTGTTTCTGATGTGTGTGTGTGTGT
Associated Phenotype:
Not determined