ZMP
si:dkey-60b12.1
Ensembl ID:
ZFIN ID:
Description:
roquin [Source:RefSeq peptide;Acc:NP_001108155]
Human Orthologue:
RC3H1
Human Description:
ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:29434]
Mouse Orthologue:
Rc3h1
Mouse Description:
RING CCCH (C3H) domains 1 Gene [Source:MGI Symbol;Acc:MGI:2685397]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa18718 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa18718
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092078 | Nonsense | 228 | 1098 | 4 | 18 |
| ENSDART00000139703 | Nonsense | 228 | 1111 | 4 | 19 |
Genomic Location (Zv9):
Chromosome 2 (position 6884163)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 7307733 |
| GRCz11 | 2 | 7179339 |
KASP Assay ID:
2259-1574.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGAAGATGGATCTGCTCTTTCCAGAAAGGTTCTGGTTCTTTTTGTGGTA[C/T]AGAGACTGGAACCGAGATTTCCTCAGGCCTCCAAAACCAGTATTGGACAT
Long Flanking Sequence:
AATGAAATTAAATGCTTTTATAGAAATCAAGAAAAAGTAAAAAAAACTCATCTGGTATCATCTCTGCGTAATCCAAAATATTAAGAGCAAGACTTATATTGTTTGAGAGAAGTCTATCCTTCAAAAAGCCAGACTGACATTCATCTATTGTATCGTCTAGAACACATTTAATCTTTTTGGCAAAAATCATAGCTAATATCTTATAATATCTCATAATAGTAATTATTCAGACTTATAAAGACTTATAGGTTGCCAATTTTCCAACAGAGAAGTGTCTTTTTGAGGTTTTGGAATCAGATTTATAATACCCTGTGTCATAGAAAGTGGAAAAAACAAAATAATTAAATGCCTTTATTGGTCGTTTGACCTCATCTAACATCTCATTATTGTGTATGTCTTTTTTATCTTCAGCCATGCAGGAGGAGGCACTGAAGCTGGTGTTGTTGGCCTTGGAAGATGGATCTGCTCTTTCCAGAAAGGTTCTGGTTCTTTTTGTGGTA[C/T]AGAGACTGGAACCGAGATTTCCTCAGGCCTCCAAAACCAGTATTGGACATGTAGTTCAGCTCCTCTACCGTGCCTCTTGCTTTAAGGTTCATTTCCTTGGCTTGTGTTTCACATCTCACTTGAGCTGTTTATGTTCATTTTCTATCCATCCATCCATCCATCCATCCGTCCATCCATCCATCCATCCATCCGTCCGTCCGTCTGTCTGTCTGTCTGTCTATCATTCTTTCTGTCCATCCATCCACCCACATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTGTCTGTCTGCCTGTCCTTCCATCCGTCTATCTATC
Associated Phenotype:
Not determined