ZMP
si:dkey-275m12.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
KALRN
Human Description:
kalirin, RhoGEF kinase [Source:HGNC Symbol;Acc:4814]
Mouse Orthologue:
Kalrn
Mouse Description:
kalirin, RhoGEF kinase Gene [Source:MGI Symbol;Acc:MGI:2685385]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21425 | Nonsense | Available for shipment | Available now |
| sa18651 | Essential Splice Site, Missense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21425
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000114042 | Nonsense | 379 | 1505 | 6 | 30 |
| ENSDART00000136129 | None | None | 1612 | None | 37 |
Genomic Location (Zv9):
Chromosome 9 (position 4259632)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 4308554 |
| GRCz11 | 9 | 4277063 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGGGCCACTACGCCGCTCAGCAGATCAAACAGATCAGCACTCAGCTGGAT[C/T]AGGAGTGGAAGAGCTTCGCGGCTGCTCTCGATGAACGCAGCACCATCCTT
Long Flanking Sequence:
TACCAAACCGAACCGTACCGTACCACTCAGTGGAAACGGGCCATAATAACACAGGCTCATCAGGGAACTTCAAATAATCTCGACCTTCAGTAAATACGTTCACATTCATATTTATATGCTTGACTGTCACGGCACTGGTTTTGACTGTTTGGCACCATCCTGTGACTGAATAATAAATAGGTTAGTTTATGCTCCATTCAGCCGTTTTTGTATTAAAGACTTAATAAACTATTAGAGCTCAGAAAAATGTTTTTTTTACTAGTATTTTTTACTAGTAGCAATGTAATAAGTGGCATAAAGTACATCCAGGCGTATTATGAGCATGCCAAAATGTGTAAATGGCTCCTACTTTCACCTGCAACACCTGCCATGCTCTTTGATCTCCCGTTTCCCAGAATGCCTATGTGAACATAAACCGCATCATGTCGGTGGCGTCGCGGCTGTCGGAGGCGGGCCACTACGCCGCTCAGCAGATCAAACAGATCAGCACTCAGCTGGAT[C/T]AGGAGTGGAAGAGCTTCGCGGCTGCTCTCGATGAACGCAGCACCATCCTTGCCATGTCTGCCGTCTTCCATCAGAAATCTGAACAGGTATAAAATTCCTAATTACTTCATCTGTGTAGGTCTCACAGAATGCAAAAGCTAATAAAAGTTCCATACAATGCCCTGATTCAAGATGTTAAATTGATCTATGATGTAAACATTATTGAGTATATCTGTGGTAAGATGAAGAAGGAGGCATTGAAGATGAATCCAAAGAATCTTGATGAACTCTGGAAGCCCATTCCAGATGACTTTATTAATAAGTTATTTGAGTCATTGCAGAGATGTATGGATGCAGTCCTCCAAGCTCATGGGAGTCACACATTATCAATTATTTTTCCACTGCACTTTATATTCTACATCAATAAATATACAATAAACATTGATTCTATTAAGTGACAAGACTTTTGTCTAAGCAAAGTCAGACCTTACTGTCCTAATTAAATAATTAAACATAATCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18651
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site, Missense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000114042 | Essential Splice Site | 910 | 1505 | None | 30 |
| ENSDART00000136129 | Missense | 105 | 1612 | 3 | 37 |
Genomic Location (Zv9):
Chromosome 9 (position 4305839)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 4354565 |
| GRCz11 | 9 | 4323074 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCTTCTTCNTTTTCTCTTYCTGCAGTCTTTGTTCCACGCTAACTCTCTCC[A/T]GAAAACCCATCAGAGTGCACTACAGGTCCAGCAGAAGGCAGAAATCATGT
Long Flanking Sequence:
ACCATTTTGTTTTCATATTCTGATGCAGTTCCTAGAAAAATTAAATACTGAATGAAAAAACAGTGGGCGTGGTTTGTTTTGTTCTACTGCGAGCTGATTGGATGTAGCAAAGTGAATATTTCATTATGAATGACCGGAGAAAGGGTTTGGGAGGAGTTATTACAACCTAACAGACTTCTCCTGCTCACCATTTCTGCTTGTTGTCAAAACTGATAGTTGGAGGGGCGTGGTTAAGTATGGTAGCCACGCCCATTACCTCAGACAAACTTAATCTGAGAATTTAACTGAAAGCAAACAGGAAGTGCATTTTCAGATTTCAATTAAATATTAGAAGGGCAAAAAAATGTTGTTAATGACATGCACAAATGAATTGTTCACCACAAAATTAGCGAACAAAATCAATATGGTTAGTATTGATTTCACGCGCACTTTAAGGTATTTAATTTTCCGTTCTTCTTCTTTTCTCTTTCTGCAGTCTTTGTTCCACGCTAACTCTCTCC[A/T]GAAAACCCATCAGAGTGCACTACAGGTCCAGCAGAAGGCAGAAATCATGTTACAGGCTGGACACTTTGACCCCGAGGCCATCCGCAGCTGTGCAGAGAAGGTGGCCGTGCACTGGCAGCAGCTCATGCTCAAGATGGAGGACAGACTCAAACTGGTTAATGCCTCGGTGGCCTTCTACAAGACGTCAGAACAGGTGCTGGGAAACACAATATCACTTAACCCCCTTGGGTTGTGCACCACATACCCGTGATTGATGCAGCTTATTAAAACGAACAAAAAAATAGCCTATCAAGTGTCCCAAAAATAGTCTCACACTATTCTAATTGAAAAGAGGTGTGTGTGTGTTGATTGTGTAATGTGGTTCCATTTTTAAAACATGAATTATTATAATATAAAAAAGCATCAAAAGATCATTCAAGAGTACTCAGTGGTGTACTCCTGTGTTATTCAATCCCAGTCATTCCTAAAACTTCCCCAACCCTCATCACCCACCCCACCGT
Associated Phenotype:
Not determined