ZMP

pcdh11x

Ensembl ID:

ENSDARG00000033556

Human Orthologues:

PCDH11X, PCDH11Y

Human Descriptions:

protocadherin 11 X-linked [Source:HGNC Symbol;Acc:8656]
protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:15813]

Mouse Orthologue:

Pcdh11x

Mouse Description:

protocadherin 11 X-linked Gene [Source:MGI Symbol;Acc:MGI:2442849]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa31987	Nonsense	Available for shipment	Available now
sa18608	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa31987

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113461	Nonsense	24	1036	1	3

Genomic Location (Zv9):

Chromosome 14 (position 28337258)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	26990832
GRCz11	14	27288937

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCCATGTTCTGGTGGTTTTATTCACCTGCTTGTTCTTGATGTGCCGGGCT[C/T]AAGAAAAGGACTACACCGTAAAAGAGGAGCAGCCGGAGAATGTGCGCATC

Long Flanking Sequence:

CCCAGTGAGCTGTTCACTGCTATGCCTGATTGAGTTGACTTGAGAACCAGTTGCATCCATTACAGATCATTTACATTAGTTTAAAAAAATCCAAGAAAATAAATTTTTATTTATTTTGTAACCGTATGGAAAAGAGCAACCAACAGAATATTTGATTCTTTGTTGCAAGCTGTACAGTACACAGTAGATTTGGAAGTACATGAGGGTAAGAAAATGGACAGTATGTGGCTGAACTATGTTTAATTTATTAAAACATCTAAAATGCTCCCCCAGAGACTTGAGAATCATTTGCTTGTTCAGATTTTAATGTTCCAAAGCATCAAAAAGCTATTTGTAGCAAAACTGTGTTTTAGAGTTGAGAATATGACCATCTTTTTCTTTTCATCTTCCTCTAGCAGATCTTTGAAGAAAGTGCAGCACCTACTTTGAGTATGGACTTAGCAAGTGAGGCCCATGTTCTGGTGGTTTTATTCACCTGCTTGTTCTTGATGTGCCGGGCT[C/T]AAGAAAAGGACTACACCGTAAAAGAGGAGCAGCCGGAGAATGTGCGCATCGGAAACCTGCGCAAAGACCTAAACTTGAACCTGGATCCAGACATTAAACTGTCTCCTGCGCTGCAGTTTAAACCTGTCTACAAGACAGGTGATGTGCCTTTAGTCAAGGTAGAAGCCAGCACAGGAGAAATTCTTACCACAGCCAACCGCATCGACCGCGAGAAACTCTGTTCTGGAGTCTTCAACGAGAAGCGCTGCTATTATGAGATTGAGGTTGCTGTACTACCTGATGAGATTTTCCGACTGGTCAAGATCCGCTTCCTCATCGAAGACATCAACGACAATGCCCCACTCTTTCAGTCGACAGTTATCAACATCTCCATTCCAGAAAACACAGCCATCAACAGCCGCTACCCAGTCCCTTCCGCATTTGACCCTGATATAGGAATCAATGGGATTCAGCACTATGAGCTTGTCAAGGTGAGTTCAACGTTCAGCTGTGATTTATGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa18608

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113461	Nonsense	656	1036	2	3

Genomic Location (Zv9):

Chromosome 14 (position 28330054)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	26983659
GRCz11	14	27281764

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ACATTTGTTGTCAAGGCTGTGGATGCAGGTCYAATGCAAACCACCTCATA[T/A]GCAAAGGTCACTATAAATGTTGTTGACGTGAACSACAATCGACCAGTGTT

Long Flanking Sequence:

GCAACAGATGCTGATAGTGGTTCTAATGCTCTTATTATTTATAGTCTTGGCCCAGATGCTCCTGATGGGTTTAACATAGATTCTCGATCTGGAATTCTTTCTGTTGTCAAAAGGCTAGATAGAGAGAAGCAGGAGAAGTATTCATTCACAGTCATTGCAAGGGATAACGGTACAACTCCTCTTCAAAGCAACGTCACTGTAAAGCTGATAGTCCAAGACCAAAATGATAACAGTCCTGCCTTTACCCATCCCGAGTACAACTTTTATGTGCCTGAGAACCTTCCTTTGTATGGGACAGTGGGTTTGATCACTGTCACAGATGCGGATGCTGGCGACAATGCAGTCGTCACCCTCTCGATCATTAACGGGAAGGACAATTTCATCATTGACCCCAAAACTGGGGTGATCAAGCCAAACATTACCTTCGACAGGGAGCAACAAAGCTCCTACACATTTGTTGTCAAGGCTGTGGATGCAGGTCTAATGCAAACCACCTCATA[T/A]GCAAAGGTCACTATAAATGTTGTTGACGTGAACGACAATCGACCAGTGTTTGTCATCCCCTCCTCAAACTACTCCTATGATCTAGTACCTTCAAACACTAGCCCTGGATCTGTGGTGACCAGAGTGTTTGCTATAGATAATGATACTGGGATGAATGCTGAGCTCCAGTATAGTATTATTGGAGGGTCGCTGAGAGGACTGTTTACCATTGACAAAACGACAGGCAACATTACTCTGCAGGAAAAGATTGTAGCAGCAGACCAAGGTCTACATAGGCTGGTGGTGAAGGTCAAGGACTTGGGGCAGCCAGAGTCCTTACATGCAATTGCCCTTGTCCATTTGTTTGTGAATGATACGGTCTCTAATGCCACGTTCATTCAGGAGCAACTACGCAAAAGTTTAGAGACTCCTTTAGAGCGGAACATTGGGGACAATGATGTGACACCCCAGACTAATGGCTATGTAATTGTCGTTATTGCCATAATTGCTGGGACTATGAC

Associated Phenotype:

Not determined