ZMP
colm
Ensembl ID:
ZFIN ID:
Description:
gliomedin [Source:RefSeq peptide;Acc:NP_001073634]
Human Orthologue:
GLDN
Human Description:
gliomedin [Source:HGNC Symbol;Acc:29514]
Mouse Orthologue:
Gldn
Mouse Description:
gliomedin Gene [Source:MGI Symbol;Acc:MGI:2388361]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39210 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa10951 | Nonsense | Available for shipment | Available now |
| sa18587 | Nonsense | Available for shipment | Available now |
| sa9035 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa39210
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087960 | Nonsense | 24 | 542 | 1 | 9 |
Genomic Location (Zv9):
Chromosome 18 (position 38087183)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 39668886 |
| GRCz11 | 18 | 39649894 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTGAGAAGAACCGGAGGCTTCAGGCAGTGCGGTGGCCGGATGTCCTGG[C/T]AGTTCCGCTGGATGCTGTATAGCGTTTGTATATTGACGGTGATCAACTGT
Long Flanking Sequence:
CAGTTAATATCTTAATAATAGGTAGGTAATAAATCAGTATTTAATAGCATGAATTGTGACCTAAAGTAAAGTGTTACCAAATTTAGACGTTTAGAGACCCCTTGGCTTTGGAGAAATGTTTACAAAAATCTTGCTGTGTCTCTCAGCATGTCTGGTGTTCTTCCACATCATTGGCTGCTGGTGTAGATGTGGATTATGCTGGTCAGCCCACGGTCATGCTGAAGAATGGACTCTACTGCATATAAATCAGGTGACTGCACAAGCGGGGGGTTTCTTCTCCAGCAGCCCTCAGTTGCGCACAGACAGACTCTGATTGTCCTCTTTCATCTTTATTTTGGGGAAATACTCTAGACGCTTCTTTTTTCAGCCTTTATTTTTGAAAAGTATTGTTATTCTGGTGGTTTTCAGGACACACTTTTGAATTTCTGAGAATGCTGGATCCACTGGCTGAGTTGAGAAGAACCGGAGGCTTCAGGCAGTGCGGTGGCCGGATGTCCTGG[C/T]AGTTCCGCTGGATGCTGTATAGCGTTTGTATATTGACGGTGATCAACTGTGCCGGCCTGGTTCTACTCCTGGTACAGCAGAGGGATTTGTGGGCGCAGCTGATTGAGGTGGAGAGGCAGATGGTGGAGATCTCTCAGAGCTCCGTGGTAGAGTTTATGACGCAGGTGAATGAAGATGAAGCAGAGTATCAATACTCAAGGAACAAGCGACGCCGGCAGCACCGAGGGACGCGGCCCTTTGAGGAGCACGAGGGAAGCGTTGGAGAGGAAGTCCTGAGTGATTTCCAGTACTCGTTTCAGCAGCCGCCTGGACCAGTTTACCAGCACAAAACCGAGGAAAAAGATGGAATGATGATGATGATGACATACTCCATGGTGCCAGTAAGAAACTCACTCTATGATATCAATGATCTATTGATGCGTGTTCTTTTCCTAAAGGAAATTGTAAATAAAATGTTGACAACAGTAACTCCTGTCCAGTAACTTTAGTTATAAACAGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10951
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087960 | Nonsense | 86 | 542 | 1 | 9 |
| ENSDART00000087960 | Nonsense | 86 | 542 | 1 | 9 |
Genomic Location (Zv9):
Chromosome 18 (position 38087371)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 39669074 |
| GRCz11 | 18 | 39650082 |
KASP Assay ID:
2261-2481.1 (used for ordering genotyping assays)
KASP Sequence:
AGCTCCGTGGTAGAGTTTATGACGCARGTGAWTGAAGATGAAGCAGAGTA[T/A]CAATAMTCAAGRAACAAGCGACGCCGGCAGCACCGAGGGACGCGGCCCTT
Long Flanking Sequence:
GTGGATTATGCTGGTCAGCCCACGGTCATGCTGAAGAATGGACTCTACTGCATATAAATCAGGTGACTGCACAAGCGGGGGGTTTCTTCTCCAGCAGCCCTCAGTTGCGCACAGACAGACTCTGATTGTCCTCTTTCATCTTTATTTTGGGGAAATACTCTAGACGCTTCTTTTTTCAGCCTTTATTTTTGAAAAGTATTGTTATTCTGGTGGTTTTCAGGACACACTTTTGAATTTCTGAGAATGCTGGATCCACTGGCTGAGTTGAGAAGAACCGGAGGCTTCAGGCAGTGCGGTGGCCGGATGTCCTGGCAGTTCCGCTGGATGCTGTATAGCGTTTGTATATTGACGGTGATCAACTGTGCCGGCCTGGTTCTACTCCTGGTACAGCAGAGGGATTTGTGGGCGCAGCTGATTGAGGTGGAGAGGCAGATGGTGGAGATCTCTCAGAGCTCCGTGGTAGAGTTTATGACGCAGGTGAATGAAGATGAAGCAGAGTA[T/A]CAATACTCAAGGAACAAGCGACGCCGGCAGCACCGAGGGACGCGGCCCTTTGAGGAGCACGAGGGAAGCGTTGGAGAGGAAGTCCTGAGTGATTTCCAGTACTCGTTTCAGCAGCCGCCTGGACCAGTTTACCAGCACAAAACCGAGGAAAAAGATGGAATGATGATGATGATGACATACTCCATGGTGCCAGTAAGAAACTCACTCTATGATATCAATGATCTATTGATGCGTGTTCTTTTCCTAAAGGAAATTGTAAATAAAATGTTGACAACAGTAACTCCTGTCCAGTAACTTTAGTTATAAACAGTATAGTAAGTTTATAGATTAATGTGCCATTTTTCCCTCCAATTTTTATAGTTCACAACTGTTTTATGCCTGAATTTCTTTAACAAAAATATTATTATTGGTTATTAGTTAAAAAATGTGCCATGTTATTGTAATTATACAAATGTAAAAAAAATTATTGTAATTTTATTTTTCCTCCCTGATTAAAACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18587
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087960 | Nonsense | 119 | 542 | 1 | 9 |
Genomic Location (Zv9):
Chromosome 18 (position 38087468)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 39669171 |
| GRCz11 | 18 | 39650179 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTTTGAGGAGCAYGAGGGRAGCGTWGGAGAGGAAGTCCTRAGTGATTTC[C/T]AGTACKCGTTTCAGCAGCCGCCTGGACCRGTTTACCAGCACAAAACSRAG
Long Flanking Sequence:
CCCTCAGTTGCGCACAGACAGACTCTGATTGTCCTCTTTCATCTTTATTTTGGGGAAATACTCTAGACGCTTCTTTTTTCAGCCTTTATTTTTGAAAAGTATTGTTATTCTGGTGGTTTTCAGGACACACTTTTGAATTTCTGAGAATGCTGGATCCACTGGCTGAGTTGAGAAGAACCGGAGGCTTCAGGCAGTGCGGTGGCCGGATGTCCTGGCAGTTCCGCTGGATGCTGTATAGCGTTTGTATATTGACGGTGATCAACTGTGCCGGCCTGGTTCTACTCCTGGTACAGCAGAGGGATTTGTGGGCGCAGCTGATTGAGGTGGAGAGGCAGATGGTGGAGATCTCTCAGAGCTCCGTGGTAGAGTTTATGACGCAGGTGAATGAAGATGAAGCAGAGTATCAATACTCAAGGAACAAGCGACGCCGGCAGCACCGAGGGACGCGGCCCTTTGAGGAGCACGAGGGAAGCGTTGGAGAGGAAGTCCTGAGTGATTTC[C/T]AGTACTCGTTTCAGCAGCCGCCTGGACCAGTTTACCAGCACAAAACCGAGGAAAAAGATGGAATGATGATGATGATGACATACTCCATGGTGCCAGTAAGAAACTCACTCTATGATATCAATGATCTATTGATGCGTGTTCTTTTCCTAAAGGAAATTGTAAATAAAATGTTGACAACAGTAACTCCTGTCCAGTAACTTTAGTTATAAACAGTATAGTAAGTTTATAGATTAATGTGCCATTTTTCCCTCCAATTTTTATAGTTCACAACTGTTTTATGCCTGAATTTCTTTAACAAAAATATTATTATTGGTTATTAGTTAAAAAATGTGCCATGTTATTGTAATTATACAAATGTAAAAAAAATTATTGTAATTTTATTTTTCCTCCCTGATTAAAACAGTATTTTTATATTTGTATATTTAATTGTTTTAATATATATATTTTAATAAAAATGTTTTATAATAATTTGAATAAATTGTAGATGACACCCTCTAAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9035
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087960 | Essential Splice Site | 168 | 542 | 3 | 9 |
Genomic Location (Zv9):
Chromosome 18 (position 38089555)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 39671258 |
| GRCz11 | 18 | 39652266 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATAYACTTATAAAATCAAGTTTACTGTTTGGTTTATTTTTTGGCTTCCAC[A/T]GGACCACCAGGACCACCAGGAATTGCAGGTAGGAAATCAATTATYCAAAT
Long Flanking Sequence:
GGAACTTGTAGTCCATATACCGGCGGATTTGTAGTCCTTATAGTGACCCCTATGAATACCAGCAATCTGCAAGGATAGATCGCTGATGATTGTGACAGTTAAATTACAGTCATTTACTGTCTGTTATTTTACGGTAAATGCCTGCAATTTAACGGTCGCTATCTGCCAGAAAAAAAGTAAAATAATGGATTTTTTTACAGTAAACAAATGAATGCATGGTTGGTTATATTACATTACTGGATTATTTTAGATAATTTAATGACGAAAAAAAAACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATAATTTATTATTATTTTTTTTTCAGGTTAAAATTTTGCTGGATATTTGCAACAGTACTAAAGGAGTCTGTCTGACTGGTGAGTATCAGAATCGGTTGTCATATTTATTTTCAGAATATACTTATAAAATCAAGTTTACTGTTTGGTTTATTTTTTGGCTTCCAC[A/T]GGACCACCAGGACCACCAGGAATTGCAGGTAGGAAATCAATTATTCAAATGTATACTGTATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAATTATTGGAAATATTGGAAAAATTAAAACAAAAATGACAAGATTAATTGTATGAAATATTTGAAATAAATGTTGTTAAGTGTTTAAATTGTGACTTAATTAAACAACTTCGCTTTATGAAATTGCAGGTATACCGGGTGTGGATGGAATGCCAGGCTATAATGGAACAGATGGAATTCCAGGGTTGCCAGGAGAGCCTGGAGCACATGGAAAACGAGGAAAAAGAGGTCAGAACGTGGAAAATCCAGCCATCATACACATGAATGAGTACAGTCAAAAAGCTCTTTAAAGGAACATGTCCCCCTTTCAAACCTCTTCTTGAACATTGAAGGAAGAGAGAGAATTTTTC
Associated Phenotype:
Not determined