ZMP
si:ch211-109n19.5
Ensembl ID:
ZFIN ID:
Human Orthologue:
SCLT1
Human Description:
sodium channel and clathrin linker 1 [Source:HGNC Symbol;Acc:26406]
Mouse Orthologue:
Sclt1
Mouse Description:
sodium channel and clathrin linker 1 Gene [Source:MGI Symbol;Acc:MGI:1914411]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1855 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa1855
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079782 | Essential Splice Site | 632 | 683 | 20 | 21 |
| ENSDART00000134708 | None | None | 178 | None | 8 |
| ENSDART00000144596 | None | None | 114 | None | 8 |
| ENSDART00000146067 | Essential Splice Site | 632 | 683 | 21 | 22 |
Genomic Location (Zv9):
Chromosome 1 (position 11661625)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 11678694 |
| GRCz11 | 1 | 12365494 |
KASP Assay ID:
554-1846.1 (used for ordering genotyping assays)
KASP Sequence:
CCTGTAATATATCCTGTGAGTGATCGAGTCTGYGGTTGTGGTCTTGTGTA[G/A]TTTGAGAGGCAGGTCTCAGAACAGCAGGAGAAGAACACTCGTCTACAGCG
Long Flanking Sequence:
AGGTGCTTGATTTAAAATTAATGGTGCTTTAAAAATTCTTGAAAGTGTGGGAACCCTGGTTAAACTGAAATGACTGCTGGTTACAGATCAGAGCTGAACAGACAGAAACAACGCGTTCAGGAACTAGAGATCCAGATGGAAGCTGATCATCAGAAGATACTGGAGGTGGGCAAGATCCACAAACATTTCTTATTTATGGTTTGGGAAAACTTTTTAATTAGCAATAATGAATGTTTTTTTCCAAATTCTGCTGTATTCTTTTCCAATGTTGTGTTTGTGCCAATAGGTGGCAGAAGTTCCCGTTTGTATGAGGGATTTATTGATTCAACAATTTGCTCAAAATAATTGATTGATTTAGAAACCAATCAAGTGGCTGAACAGATCAGTGAATGAGTGATATTTGATCTCGCTATAGTCATAGATAAATAATAATGCACACCTTTGTTTGTGCCTGTAATATATCCTGTGAGTGATCGAGTCTGTGGTTGTGGTCTTGTGTA[G/A]TTTGAGAGGCAGGTCTCAGAACAGCAGGAGAAGAACACTCGTCTACAGCGGCGTCTTTCTCAGGCAGAGCAGCGTGCAGCAAGTGCTTCACAACAGGTGAACGTCTGCCATATTCTACACACTTTAACTAATGAACCACTATGAGGAGAAGCACAACAGTACAATGTTTTACTTCAGAGGCATAGTTTAAAACAAGAGTTACAATCCCACAATGCACTGCTAATTGACAAATGACAATTGTTTAATTGTTATCTAATATCTAAGCAAATGCAGAACTGAATATATATGACAGACCCCAACTAAAGCTCAAGCACTGGTCATGTGTTTACTGCATTTGATGTTAGCCTTGTTAAATGAGAGAGCTCTTTAGGGAGAATAACTGTAGCAAAATATTCATGATCTGGACGCCACCTCCTCATTTTGAACCAGACAAAACCCTGCAAATAGGGGGCATTTACACTTGTGTGTTTTCATTTTAAAACACAGATTGTAACAGAAAA
Associated Phenotype:
Not determined