ZMP

clic1

Ensembl ID:

ENSDARG00000058858

ZFIN ID:

ZDB-GENE-030131-3202

Description:

chloride intracellular channel protein 1 [Source:RefSeq peptide;Acc:NP_997847]

Human Orthologue:

CLIC1

Human Description:

chloride intracellular channel 1 [Source:HGNC Symbol;Acc:2062]

Mouse Orthologue:

Clic1

Mouse Description:

chloride intracellular channel 1 Gene [Source:MGI Symbol;Acc:MGI:2148924]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa18538	Essential Splice Site	Available for shipment	Available now
sa36807	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa18538

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000081810	Essential Splice Site	92	241	3	6
ENSDART00000081810	Essential Splice Site	92	241	3	6

Genomic Location (Zv9):

Chromosome 19 (position 16820457)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	17472233
GRCz11	19	18760162

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCKAAG[T/A]AACTTACTTCATTATTGCATGCTTCATTTCCYTTCATTGTGTTRCTAGAT

Long Flanking Sequence:

AGAAGTATCTAAAGGATCACTTGGTAATTAAAGACAGGTGTTTTTGATCAATGTTACAGATAAACTCTGCAGGAAGGTTGATCTTCAGGAATAGAGCTGAACCCCCCTGGTCTATACACAGTCATTCTCTGAATTTGTGTATTTGTTTATAGGCAGGAAGTGATGGTCAGAGTATTGGAAACTGCCCGTTTTCTCAGCGGCTTTTCATGGTCTTGTGGCTAAAAGGCGTAACTTTTAATGTGACCACAGTTGACATGAAGAGGTTGGTTTTTCTGTTGCATTGTGTATCTTGAGCAGTGCACCTTTTTAATTGAAATGATTAACATAGAAATTTCCACCCTGCCAACTTCCTCTTTCTCTGTTTTGTGAGCAGGAAACCAGAAATTCTAAAAGATCTGGCCCCTGGTGCTCAGCCTCCTTTCTTGCTATATGGTACAGAGGTGAAGACAGACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/A]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGATATCATCACTGTGCTTGTATTTGTATACTTATTATAACTGTATGGATACAAATCCTGATGTTGAACTTGTAATCATACTGTAACATGTATTTAAGTGTTTTTTCTTAAATGTGGGTAAAGTAATTATGAAATCAGAATACAAATACAAATTACAGTATGTAATTTTCAATCTTTAATTTTATAAATCAGGGATGTCAAACACAGATCACGAAGGGCCACAGCTCTACACAGTTTAGTTCCATTCCTGTTTCAACACACTTGCCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATAAGTATGATCAATTGTGTTTGATTAGATTTGGAACTAAACTGTGCGGAGCTGCAGCCCTCCAGGAACTAAGTTTGGCACCACTGGTATGAAGCCATTTTGTCTATCAGAAGAATTAAATTTTGATTGGCCCTCAGTCTTCATTAGAACAGAAATGG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa36807

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000081810	Essential Splice Site	92	241	3	6
ENSDART00000081810	Essential Splice Site	92	241	3	6

Genomic Location (Zv9):

Chromosome 19 (position 16820457)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	17472233
GRCz11	19	18760162

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/G]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGAT

Long Flanking Sequence:

AGAAGTATCTAAAGGATCACTTGGTAATTAAAGACAGGTGTTTTTGATCAATGTTACAGATAAACTCTGCAGGAAGGTTGATCTTCAGGAATAGAGCTGAACCCCCCTGGTCTATACACAGTCATTCTCTGAATTTGTGTATTTGTTTATAGGCAGGAAGTGATGGTCAGAGTATTGGAAACTGCCCGTTTTCTCAGCGGCTTTTCATGGTCTTGTGGCTAAAAGGCGTAACTTTTAATGTGACCACAGTTGACATGAAGAGGTTGGTTTTTCTGTTGCATTGTGTATCTTGAGCAGTGCACCTTTTTAATTGAAATGATTAACATAGAAATTTCCACCCTGCCAACTTCCTCTTTCTCTGTTTTGTGAGCAGGAAACCAGAAATTCTAAAAGATCTGGCCCCTGGTGCTCAGCCTCCTTTCTTGCTATATGGTACAGAGGTGAAGACAGACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/G]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGATATCATCACTGTGCTTGTATTTGTATACTTATTATAACTGTATGGATACAAATCCTGATGTTGAACTTGTAATCATACTGTAACATGTATTTAAGTGTTTTTTCTTAAATGTGGGTAAAGTAATTATGAAATCAGAATACAAATACAAATTACAGTATGTAATTTTCAATCTTTAATTTTATAAATCAGGGATGTCAAACACAGATCACGAAGGGCCACAGCTCTACACAGTTTAGTTCCATTCCTGTTTCAACACACTTGCCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATAAGTATGATCAATTGTGTTTGATTAGATTTGGAACTAAACTGTGCGGAGCTGCAGCCCTCCAGGAACTAAGTTTGGCACCACTGGTATGAAGCCATTTTGTCTATCAGAAGAATTAAATTTTGATTGGCCCTCAGTCTTCATTAGAACAGAAATGG

Associated Phenotype:

Not determined