Busch Lab

ZMP

lsm10

Ensembl ID:
ENSDARG00000094513
ZFIN ID:
ZDB-GENE-090508-7
Description:
Novel protein similar to vertebrate LSM10, U7 small nuclear RNA associated (LSM10) [Source:UniProtKB
Human Orthologue:
LSM10
Human Description:
LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:17562]
Mouse Orthologue:
Lsm10
Mouse Description:
U7 snRNP-specific Sm-like protein LSM10 Gene [Source:MGI Symbol;Acc:MGI:2151045]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa18537 Nonsense Available for shipment Available now
sa9747 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa18537
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000145084 Nonsense 34 120 2 2
ENSDART00000145084 Nonsense 34 120 2 2
Genomic Location (Zv9):
Chromosome 19 (position 2924618)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 3902092
GRCz11 19 3842990
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGGTGATCCTCCTGCAGGGTCTGCATGGACAGGTGACCACCGTTGACCTG[C/T]GAGAYGAGAGCACAGCGAGGGGCAGAGTGATAAATGTGGACGCTTTCATG
Long Flanking Sequence:
TAGGAGTATCATTACAAAAATCTTAATAAATTAAATAAAAATAATACCGTTTTAACTTGTATTTAATGTTTACAGTGCAAATCCAACTAGATCCACTTATTCGGTAAACAAAGTCTCTCATATAATATATCTACTAACAGACGGAACATATTAATGTACATACTGTATTGTACATAAATCATATGATAATTTTCATATTATTCAATAATACTGAAATTAATTTCAAAATTCAATGCGTAAACAAAGTAAATAAATAGACTCAATGATGCGCTAAAAATCTACGGATTGCTCCACATGTTGATTCTGTGTGGGCCTAGTCATGACCTAGTATTATAATCAGATATAATATCACACAAAAGAAATCGTCTGATTGTTCATGATTATTTTGTGCACAGATCAACATGGACGTGAGCCATTCGATACGTGAACGCACCATCGCTGAGAACAGTCTGGTGATCCTCCTGCAGGGTCTGCATGGACAGGTGACCACCGTTGACCTG[C/T]GAGACGAGAGCACAGCGAGGGGCAGAGTGATAAATGTGGACGCTTTCATGAACATCCGGCTGGAGAATGTCCTATACAGGGACAGACGGGGACGCAAGTCGAGCATGGATGATCTCTTCATTACTGGCAGAAACGTGCGGTACGTCCACATCCCTGACCAGATCAACATAATAGAGACAATAGAGGCGCAGCTCTCCAAAATACACCGCGTGCGAAACTTCGGAGCGGGCGGTGGACGGAAGGAGTACTCAAAGAAAAAGTAGCTGATGCTTGCAGTGTGTTTTTGATGGGAATGCTCGTTGGTGAATAGTTTGTTTATATTAAAATGGTTTCTGGGTCATGTGGGAAAATGACTTGTGTTTATTTTGAGCGCCTCTGCTGGTTTGAGAATTACATAAGCAAATTAGTGAAATGACTATTGACTGATGAGTTATTTAACGTGGCGTTGTTTGTTTAAACTACACGCTTTGCTTTTTCCCATGTCAATATTGCTTAGCCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9747
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000145084 Nonsense 34 120 2 2
ENSDART00000145084 Nonsense 34 120 2 2
Genomic Location (Zv9):
Chromosome 19 (position 2924618)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 3902092
GRCz11 19 3842990
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGGTGATCCTCCTGCAGGGTCTGCATGGACAGGTGACCACCGTTGACCTG[C/T]GAGAYGAGAGCACAGCGAGGGGCAGAGTGWTAAATGTGGACGCTTTCATG
Long Flanking Sequence:
TAGGAGTATCATTACAAAAATCTTAATAAATTAAATAAAAATAATACCGTTTTAACTTGTATTTAATGTTTACAGTGCAAATCCAACTAGATCCACTTATTCGGTAAACAAAGTCTCTCATATAATATATCTACTAACAGACGGAACATATTAATGTACATACTGTATTGTACATAAATCATATGATAATTTTCATATTATTCAATAATACTGAAATTAATTTCAAAATTCAATGCGTAAACAAAGTAAATAAATAGACTCAATGATGCGCTAAAAATCTACGGATTGCTCCACATGTTGATTCTGTGTGGGCCTAGTCATGACCTAGTATTATAATCAGATATAATATCACACAAAAGAAATCGTCTGATTGTTCATGATTATTTTGTGCACAGATCAACATGGACGTGAGCCATTCGATACGTGAACGCACCATCGCTGAGAACAGTCTGGTGATCCTCCTGCAGGGTCTGCATGGACAGGTGACCACCGTTGACCTG[C/T]GAGACGAGAGCACAGCGAGGGGCAGAGTGATAAATGTGGACGCTTTCATGAACATCCGGCTGGAGAATGTCCTATACAGGGACAGACGGGGACGCAAGTCGAGCATGGATGATCTCTTCATTACTGGCAGAAACGTGCGGTACGTCCACATCCCTGACCAGATCAACATAATAGAGACAATAGAGGCGCAGCTCTCCAAAATACACCGCGTGCGAAACTTCGGAGCGGGCGGTGGACGGAAGGAGTACTCAAAGAAAAAGTAGCTGATGCTTGCAGTGTGTTTTTGATGGGAATGCTCGTTGGTGAATAGTTTGTTTATATTAAAATGGTTTCTGGGTCATGTGGGAAAATGACTTGTGTTTATTTTGAGCGCCTCTGCTGGTTTGAGAATTACATAAGCAAATTAGTGAAATGACTATTGACTGATGAGTTATTTAACGTGGCGTTGTTTGTTTAAACTACACGCTTTGCTTTTTCCCATGTCAATATTGCTTAGCCAA
Associated Phenotype:
Not determined