Busch Lab

ZMP

lrrn1

Ensembl ID:
ENSDARG00000060115
ZFIN ID:
ZDB-GENE-071126-1
Description:
leucine rich repeat neuronal 1 [Source:RefSeq peptide;Acc:NP_001124166]
Human Orthologue:
LRRN1
Human Description:
leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:20980]
Mouse Orthologue:
Lrrn1
Mouse Description:
leucine rich repeat protein 1, neuronal Gene [Source:MGI Symbol;Acc:MGI:106038]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa18488 Nonsense Available for shipment Available now
hu3284 Missense Confirmed mutation in F2 line Not yet available
hu3586 Nonsense Available for shipment Available now
sa33942 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa18488
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084389 Nonsense 134 717 2 2
Genomic Location (Zv9):
Chromosome 6 (position 43010376)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 43081540
GRCz11 6 43079076
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAACATGTCACAACTCACGACTCTTCACCTGGAGGAGAACCAAATAGTT[G/T]AGATGCCTGACTTCAGTTTGCAGGAWCTYACCAATCTWCAGGAGCTGTAC
Long Flanking Sequence:
TATTCTGCAACACATCTATTGAATAAGAATTTCACCTCCCCATCTCTTTGGCGCTACAAGTATTCTAGCTCTGATCTGAGGGATAAACACTTACATTCAGAATGGCTAGAGGGACTTTCTTTTTGGTAGTGGAGGGGCAGATTTGTTTCATCCTGCTTCTGGCTGTACTTGGTCTCTCTTCGGTTCACAGTACAGAATGTCCGCAGCTTTGTGTGTGCGAGATCCGGCCTTGGTTCACACCCCAGTCCACCTACAGAGAAGCAACTACTGTTGATTGCAATGACCTTCATCTTACACGGATTCCCGGTAACCTGTCAGCCGACACACAGGTGTTGCTTCTGCAGAGTAACTACATTGCCAGAACTAGCGAGGAACTGGAGCAGTTACTGAATCTTACAGAACTCGATCTGTCCCAGAACAATTTCAGCAACATCCGTGACATCGGCCTGACCAACATGTCACAACTCACGACTCTTCACCTGGAGGAGAACCAAATAGTT[G/T]AGATGCCTGACTTCAGTTTGCAGGATCTTACCAATCTACAGGAGCTGTACATTAATCACAATCAGATCAGCTCCATTGCACCCAATGCCTTCGCCGGATTGCGTAACCTTCTGAGACTCCATTTGAACTCCAACAGACTCAAGGCCATCGACAGTCGTTGGTTTGAATCAACCCCCAACCTGGAGATCCTTATGATTGGGGAAAATCCTGTGGTCGGCATTCTTGATTTAAACTTCAAACCTCTTACCAACTTGAGAAGCCTTGTCCTGGCAGGAATGGAGCTCACTGACATCCCAGGCAATGCATTTGTTGGACTGGACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGCTGAAAGAACTTGGCATTAACAACATGGGAGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3284
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084389 Missense 290 717 2 2
Genomic Location (Zv9):
Chromosome 6 (position 43009907)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 43081071
GRCz11 6 43078607
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGC[T/G]GAAAGAACTTGGCATTAACAACATGGGAGAACTTGTGTCCATTGATCGCT
Long Flanking Sequence:
GACTCTTCACCTGGAGGAGAACCAAATAGTTGAGATGCCTGACTTCAGTTTGCAGGATCTTACCAATCTACAGGAGCTGTACATTAATCACAATCAGATCAGCTCCATTGCACCCAATGCCTTCGCCGGATTGCGTAACCTTCTGAGACTCCATTTGAACTCCAACAGACTCAAGGCCATCGACAGTCGTTGGTTTGAATCAACCCCCAACCTGGAGATCCTTATGATTGGGGAAAATCCTGTGGTCGGCATTCTTGATTTAAACTTCAAACCTCTTACCAACTTGAGAAGCCTTGTCCTGGCAGGAATGGAGCTCACTGACATCCCAGGCAATGCATTTGTTGGACTGGACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGC[T/G]GAAAGAACTTGGCATTAACAACATGGGAGAACTTGTGTCCATTGATCGCTTTGCATTGGATAACCTCCCTGAGTTGACCAAACTGGAAGCCACCAACAATCCCAAGTTTTCCTACGTGAGCCGTTTAGCGTTCCGTGATTTGCCGGCACTAGAGAGCCTAATGCTCAATAATAATGCCCTAAACTCCCTCTACCAGGCAACGGCTGATTCTCTGCCCAACCTGAGAGAGATCAGCATCCACAGCAACCCACTCCGCTGCGACTGTGTAATCCAGTGGATGAGTTCCAACAAGACAACCATTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTTAGAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGTCTCCCAATGATCTCCCATGACACTTTCCCCAATCACCTCAACCTGGACATCGGGATGACGGTAGATCTTGACTGTCGTGCAATGGCTGAACCCGAACCGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3586
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084389 Nonsense 407 717 2 2
Genomic Location (Zv9):
Chromosome 6 (position 43009557)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 43080721
GRCz11 6 43078257
KASP Assay ID:
554-0130.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTT[A/T]GAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGT
Long Flanking Sequence:
ACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGCTGAAAGAACTTGGCATTAACAACATGGGAGAACTTGTGTCCATTGATCGCTTTGCATTGGATAACCTCCCTGAGTTGACCAAACTGGAAGCCACCAACAATCCCAAGTTTTCCTACGTGAGCCGTTTAGCGTTCCGTGATTTGCCGGCACTAGAGAGCCTAATGCTCAATAATAATGCCCTAAACTCCCTCTACCAGGCAACGGCTGATTCTCTGCCCAACCTGAGAGAGATCAGCATCCACAGCAACCCACTCCGCTGCGACTGTGTAATCCAGTGGATGAGTTCCAACAAGACAACCATTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTT[A/T]GAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGTCTCCCAATGATCTCCCATGACACTTTCCCCAATCACCTCAACCTGGACATCGGGATGACGGTAGATCTTGACTGTCGTGCAATGGCTGAACCCGAACCGGAAATATACTGGGTGACACCATCTGGTAACAAAGTCATGATGGATACAGTGTCTGATAAGTACCAACTTAATAGTGCAGGAACTCTGCGTATATCCTACATTCAGGTGGACGACTCTGGGCACTACACCTGTGTAGCACAAAATACAGAAGGAGCGGACACTCGGGTGACCGCCATTCGAGTTAACGGGACTCTTCTGGATAGCACGCAGCTTATGAAGATCTACGTTAAACACACCGAGTCCCATTCCATTCTAGTGTCCTGGAAAGTGAACTCCAACGTCATGACGTCCAATCTGAAGTGGTCATCGGCTACTATGAAAATCGACAACCCTCACATTACCTATACTGCT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa33942
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084389 Nonsense 717 717 2 2
Genomic Location (Zv9):
Chromosome 6 (position 43008625)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 43079789
GRCz11 6 43077325
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGACAATAAGCAGACACAGGTGGACACAACAAGAAGTTACTACATGTG[G/A]TGAAGCCTGCCAGACTTTTCCTCTCCTTTAGAGCACAAAGACACACCTTG
Long Flanking Sequence:
ATGACGTCCAATCTGAAGTGGTCATCGGCTACTATGAAAATCGACAACCCTCACATTACCTATACTGCTAAAGTTCCTGTAGATGTCCATGAGTACAATCTCACACACCTTCAGCCGGCAACTGAGTATGAGGTGTGCCTTTCGGTTTCCAATATCCACCAACAGACTCAAAAATCCTGCGTCAATGTCACAACCAAGCACGCCACGTTTGCGGTGGAGATCTCCGAGCAAGGCACCAATACGGCTCTGGCTGCTGTCATGGGCACCATTCTGGCCATCATCAGCCTGGGCTCTATCACGTTGTACATTGCGAAGAGATGGAAGAGGAAGAACTACCATCACTCCCTGAAGAAGTACATGCAGAAAACCTCATCCATCCCTCTAAATGAACTCTATCCTCCCCTCATTAACTTATGGGAGGCAGACAGTGAAAAGGACAAGGACGGATCTTCAGACAATAAGCAGACACAGGTGGACACAACAAGAAGTTACTACATGTG[G/A]TGAAGCCTGCCAGACTTTTCCTCTCCTTTAGAGCACAAAGACACACCTTGGCTTATTTGTGCGCGAGAAAGACATGGATTTCCCTTTTTTCTGCTTTGCTTACCGCAAGCAACTATTCAGACTGATATCTCTGACTTTTTAGTAGAGTGTATTGCCTTTTCTTCTTCTTTGACTTTCAATATGGCAGCTTTGTTTAGCTTCCGAGACATGTTAGTAGCTGTGCTTTTTCTTTTTTGTTTATTCTATTTTGATAGCACAGCGTAGATAAATGTCAAGGATTGACTTTGGGTCGATAGATGCTATACAGTACTCTATCTGATCCGATAAATTAATACGTCTTTGGCAGTATTCATAGAGAATGCATTGTTTCTTTCTCTCTTTCGTAAGACAGTTTAACTGTTGTGCACTGAAATATATTAACTAATTTGTCTTTGGACTCCAGTGTAAGCTGACAAGTTGAGTTTAGACTTGATACACTGTCTATTGAAAAACGTTAGCGA
Associated Phenotype:
Not determined