ZMP

slx4

Ensembl ID:

ENSDARG00000061414

ZFIN ID:

ZDB-GENE-050208-359

Description:

Novel protein [Source:UniProtKB/TrEMBL;Acc:Q1MT56]

Human Orthologue:

SLX4

Human Description:

SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23845]

Mouse Orthologue:

Btbd12

Mouse Description:

BTB (POZ) domain containing 12 Gene [Source:MGI Symbol;Acc:MGI:106299]

Alleles

There are 7 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa18364	Nonsense	Available for shipment	Available now
sa24191	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa18364

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087576	Nonsense	411	1719	5	13
ENSDART00000105002	None	None	116	None	2
ENSDART00000147719	None	None	208	None	3

Genomic Location (Zv9):

Chromosome 22 (position 27429230)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	26944675
GRCz11	22	26807127

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

YTCTTCAACCTCACGCACCCCTCTGGGACAAAAGCGCTCTTCACAGAGGA[C/T]GACAAAACTCTGTTTCAGAGTTCTACACGTCTGAGTTGAGCAGCTTCATA

Long Flanking Sequence:

TTCTGAAACACATGCTGGAATTTTTTCAGTAAGTGTTTTTCCAAGTTTTTTATCTAACAATAGCTTGACTCAGTTGTGTACATTTATTTTTGTCATTTTCAAAATGAATGGGCATCTTGTTGTTTCCATAAAGTATTTTTATGCAATAATCCCAAATGGACCTAAAAATAGGTGACTGAATGAAGGCTGAAAGTGCAAACGATCCTCAAAACACAAGCTTCCTGAAACCATATTTGTACTGTACATTAAACACAGCATATCATTCCTGTTTTCATTCAGGTAAGGGTCGTGGAAAGAGAAGGAAGGGAGCGTCTCCTGTCCAGCCGCCGTTGCTCCTCATTCAGGACCCTCAGATTGCACTGAACCGCCTACAGGAGCGGGTTTCATCTCTCCTGCTCTGCTCCAGACCACCTTCTCCTCCAACACCCACCCTGAGCCCCTCCAGCCTCCCTCTTCAACCTCACGCACCCCTCTGGGACAAAAGCGCTCTTCACAGAGGA[C/T]GACAAAACTCTGTTTCAGAGTTCTACACGTCTGAGTTGAGCAGCTTCATACAGCCATGGGTCGCACCAGTGGTGAGAAAAAATGTTCATAAAGATCAAAAATTGTAAATATAGTTTAATCAATATGTAGTTAATGCAAAAATGGGGTTTTATTAAAAAATATACAAATGTCAGGAATAGGGTTGTAACGGTATGAATTTTTTACGGTATGATAATCGTCTTAAACAATACCACGGTTTGACGGTTTCGCGGTATACGGTATGTTACAAATGTTACAAAATAATAGAACAGTGAAGCAAATTTGACTTTTTCCAAATAATATATATTTTAGTTACTATAAACAACACCGCTTACAAAGAACAAATAAAAAAATAAGAAAATAATAAATAATGTGTCAAAGTCCAAATAAATATGGTGCAAATCCTCAGTAAAAATAGATATAAATATTTACTATCCTATAAATAGTTACATAACGAAACTAGATTCAATATGGAACATCTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa24191

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

A > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087576	Essential Splice Site	643	1719	10	13
ENSDART00000105002	None	None	116	None	2
ENSDART00000147719	None	None	208	None	3

Genomic Location (Zv9):

Chromosome 22 (position 27433945)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	26949390
GRCz11	22	26811842

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGTTCTGTGTATAAAATGAGATTGCAGTAGCAAATCTTGTGATAATTTTC[A/G]GGTTTGGTTTAGCTGAGCTACAGCAGCAGTGTGAGGAGTATTCTGGAAGC

Long Flanking Sequence:

AATACTCTTCATTGGCCATGTTTGTTGTTCAGGTGTACATTTCAAAGCTAGCTTCAGATTTGAGCAGTATGGTGAACAACCCCCAACTCAGTGATGTGCAGTTGCAGGTGGACAGTGGCGATGTCTTTTTTGCACACTCGTTTATGCTGTACACACGATGCCCCCTGCTGGCCAACATGGTTAGTGCATTTTTAAAACGACGCCACCAGCATCAACTGAGTGCTGACAAATAACTAAACTGTGTTCGTAGGTTCACGATTCAGGTTTTGGCGTTCAGGAGGAAGGTTTGCCTGTTGCTCGGAGGGTGCTGTTTGGTGATGTGTTGGGTGAGGCAGTGTTGGCCTTCCTGCAGTATCTTTACACAGCTCACTGTCCTCTGACGCACACTCTGATACCACATGTGCAGGAGCTTGCCGATAGGTCAGTATGACAATTTCAATAGTGTGATTAAGTTCTGTGTATAAAATGAGATTGCAGTAGCAAATCTTGTGATAATTTTC[A/G]GGTTTGGTTTAGCTGAGCTACAGCAGCAGTGTGAGGAGTATTCTGGAAGCACAGATGAAAACGCATCTAAAGACATGTTTCAAGCACCTAAACCTCATTTCAGAGACCAAGAAGAGCATAAGTTTGCAGAAAGCAACTTCTTGGAGCTTCTCCAGTCAATGTGGCAGCATGAGAACAGTGAAGAGGAGGATGAGTTTAACGAGACGTCCGGAGAGGAGAGAGTCATGGAAGAGGTGCAAGAGAGAGATGGAGAGAAAGAGGAGCGAGTGGACGAGGAAGAGCTAGATGAGATCTATGAGTTTGCAGCGACACAAAGAAAGACGGAGACAATGTTGGAAACTGCGACAGAGACTGAGGACGATGAGGGAGATGCAAATACATTCCCTGAAAATGAAATGATGAAAGATGAAGCGGTCGAAAAAGGCGAGTCAGAATCCCTCCAAGAGAAGTCTGCCGGCAGTTGCCATAGTAACAGTCGAGGCGTGGACGGGACAGAGTCT

Associated Phenotype:

Not determined