Busch Lab

ZMP

zgc:153898

Ensembl ID:
ENSDARG00000061551
ZFIN ID:
ZDB-GENE-061013-179
Description:
zgc:153898 (zgc:153898), mRNA [Source:RefSeq DNA;Acc:NM_001077555]
Human Orthologue:
RAP1GAP2
Human Description:
RAP1 GTPase activating protein 2 [Source:HGNC Symbol;Acc:29176]
Mouse Orthologue:
Rap1gap2
Mouse Description:
RAP1 GTPase activating protein 2 Gene [Source:MGI Symbol;Acc:MGI:3028623]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa39055 Nonsense Mutation detected in F1 DNA Not yet available
sa32040 Nonsense Available for shipment Available now
sa22667 Nonsense Available for shipment Available now
sa35910 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa2799 Essential Splice Site F2 line generated Not yet available
sa18310 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa39055
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099895 None None 472 None 15
ENSDART00000126559 Nonsense 32 700 3 23
ENSDART00000137817 None None 629 None 19

The following transcripts of ENSDARG00000061551 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28619129)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29337159
GRCz11 15 29270035
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGGAAACAAGAGTTGCTGACCATCTCCAGTGTGCCTCTGGGAGAATG[T/A]CCACCTTCACCTCCCCGCACTGCACCCCCCACCATGAAGGTGAGTGTTCA
Long Flanking Sequence:
CCTAAACAAAGAAAAAGCACAGAACAGACTCACGTTTAAGAGCGAGGGGAGGCCCCTGGTAGTTCGGCGGTAAGGGATGCGTATAGGGAGGCTCGGCTCTTTAATGTTTATTTGCCACCCTTCAGAGAAAGACTGAAAGTATGGAAGAAATACGGGAAAAAACCTTTACGGAATGATAGCTTGATAGAACTGTAAAATATGGGAGAAAAACGGGAGGGTTGACAGGTATGACTTGTTGTAAACTATATTTTTACTTATTCTTCCACTTGTTTACTTGATATGCAAAGCTAAAAACCATACACAAAATACAGACGCATCAGTCAAGATAGGTAGTTTATTTGCTTCTGCGAATGAGAGCTAGTCTTCAGTGCAAAAAACAACTTTAGATCAGGTTAGTCTTCCTCATAAAGTGCTTACCATTTGCCTGACTGACCCTATATGTGTGTTTTTTTCAGGAAACAAGAGTTGCTGACCATCTCCAGTGTGCCTCTGGGAGAATG[T/A]CCACCTTCACCTCCCCGCACTGCACCCCCCACCATGAAGGTGAGTGTTCATATGCACACTCATACACACTGGGTTTTCATGATTGATAGGGACTTCCCAGTGAAATAATGGTTTTTATACTGTACAGACTGTATAAGTTGTCCTCTTATCCCGACCCTAACCCTAAATTCAACTCTCACAGAAAATAATCTGCAGTTTTATTTTTTAAAAATGCTTCATTGTGTGTAATTAATCTGCTGGTTTCATCATGGGGACCAAAATAAAATTTCCCCACAAGGGTAAAACTTACTGGTATGACTGGTATATTTGTGGGGACATTTGGTCACACACATATACACACACACACATACACACTCTCACCGCTCCATTAGCTGTGGTTAGCCCAGATTTGCTGCATTCACCTCTGGACCAAATTAACCTCTATTAGCACTGATAGCGCGTGAAAGTGCGATTGCCCTTTGTAGCACACCATATAAAATGACCCTAGTTTGGCTACAGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32040
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099895 Nonsense 71 472 4 15
ENSDART00000126559 Nonsense 122 700 6 23
ENSDART00000137817 Nonsense 65 629 2 19

The following transcripts of ENSDARG00000061551 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28643594)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29361624
GRCz11 15 29294500
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTTCTGTGAGGAGGAGAATGATGATCTGAGTCCCAGTGGAGGAGGAGGT[G/T]GAGGAGGATTCGGATACAGGATGGAGTGTAACAGCACGTCACGAGCCTAT
Long Flanking Sequence:
GTAATAACATACAGTATACAATGAAATGACGCTGACACATTTTGGTGAAAACAACTATTAGACTGAGAAGTTTAGATCAGCAAGATATATTCACTTGGAAATTTTGCTAAATGTAGGCTATCTTGATCATTTGCAAAGATGTACGTATACATTTGCAATTTGATGGAATTAATGAGAATTTCAAATCTGTTGTGAACAATTGCCAAGTGGTTTGGCGGTTTGTCCATATTGTTTTGAGAATGTAATTTCTGTTTTAAGAAATGAGCAAAAACCAATGGAGAACAACTGTAAATAGTGTTATTGAGTTGCTGATGCTTTAATTCATCATATTCACTGTCTAGGTGCTGGAGAAGGGTGGTCCATACCCTCAAGTTATTTTACCTCAGTTTGGGGGGTACTGGATTGAGGACCCAGAGGCTCCAGTTGGGACGCCTACATCCTCAGACAGCAGCTTCTGTGAGGAGGAGAATGATGATCTGAGTCCCAGTGGAGGAGGAGGT[G/T]GAGGAGGATTCGGATACAGGATGGAGTGTAACAGCACGTCACGAGCCTATCGCAAACACTTTCTTGGAAAGGTGAGGTTGCATTTGTTAGTGCTTAAAGTAGATTCATCTTCTATGATTTAAAGGAACTGTTCACTGAAAATTGAAAATTGTGTTTGTCAGTTACGCCCCCTTCAGTTATTTTAAAGCAGTTTGACTTTCTTCTGTTCAAGAAAAATGAAGTTATTTTGAAGAAAGCTGGAATACTGTAAATATTACCTTTCATTGTATTTGTTTTTCCTACTGTGGAAGTCAGTGGATACAGGGTTTCCAGCTTACTTCAAAAATATCTTCTTTTGTGTTGAAGCTCATAATAAATAGTAAGTAAATGTTCTAATCCAATCCTTCAAATGCTCTATATTACAAATTCATTTTACTTTTACTTGATAATAAATCAAGAAAACAATTTTGACATTCACTGTTTAAATGCTTATTTTTCAACAACACACTTGAATATTAATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22667
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099895 Nonsense 85 472 4 15
ENSDART00000126559 Nonsense 136 700 6 23
ENSDART00000137817 Nonsense 79 629 2 19

The following transcripts of ENSDARG00000061551 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28643636)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29361666
GRCz11 15 29294542
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGAGGTGGAGGAGGATTCGGATACAGGATGGAGTGTAACAGCACGTCA[C/T]GAGCCTATCGCAAACACTTTCTTGGAAAGGTGAGGTTGCATTTGTTAGTG
Long Flanking Sequence:
TGGTGAAAACAACTATTAGACTGAGAAGTTTAGATCAGCAAGATATATTCACTTGGAAATTTTGCTAAATGTAGGCTATCTTGATCATTTGCAAAGATGTACGTATACATTTGCAATTTGATGGAATTAATGAGAATTTCAAATCTGTTGTGAACAATTGCCAAGTGGTTTGGCGGTTTGTCCATATTGTTTTGAGAATGTAATTTCTGTTTTAAGAAATGAGCAAAAACCAATGGAGAACAACTGTAAATAGTGTTATTGAGTTGCTGATGCTTTAATTCATCATATTCACTGTCTAGGTGCTGGAGAAGGGTGGTCCATACCCTCAAGTTATTTTACCTCAGTTTGGGGGGTACTGGATTGAGGACCCAGAGGCTCCAGTTGGGACGCCTACATCCTCAGACAGCAGCTTCTGTGAGGAGGAGAATGATGATCTGAGTCCCAGTGGAGGAGGAGGTGGAGGAGGATTCGGATACAGGATGGAGTGTAACAGCACGTCA[C/T]GAGCCTATCGCAAACACTTTCTTGGAAAGGTGAGGTTGCATTTGTTAGTGCTTAAAGTAGATTCATCTTCTATGATTTAAAGGAACTGTTCACTGAAAATTGAAAATTGTGTTTGTCAGTTACGCCCCCTTCAGTTATTTTAAAGCAGTTTGACTTTCTTCTGTTCAAGAAAAATGAAGTTATTTTGAAGAAAGCTGGAATACTGTAAATATTACCTTTCATTGTATTTGTTTTTCCTACTGTGGAAGTCAGTGGATACAGGGTTTCCAGCTTACTTCAAAAATATCTTCTTTTGTGTTGAAGCTCATAATAAATAGTAAGTAAATGTTCTAATCCAATCCTTCAAATGCTCTATATTACAAATTCATTTTACTTTTACTTGATAATAAATCAAGAAAACAATTTTGACATTCACTGTTTAAATGCTTATTTTTCAACAACACACTTGAATATTAATAAAAAAAAAACAAAAAAATAAAAATAAATAAATAACATGCATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35910
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099895 Essential Splice Site 201 472 8 15
ENSDART00000126559 Essential Splice Site 252 700 10 23
ENSDART00000137817 Essential Splice Site 195 629 6 19

The following transcripts of ENSDARG00000061551 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28646376)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29364406
GRCz11 15 29297282
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGTGAACAACACTTTCAAGTTTGGAGTCATTTATCAGAAGTTCGGTCAG[G/T]TGAGAGTTGCTTTCTTCAGTTTCAGACTTCCTCCTTTTCTCATTTATTCT
Long Flanking Sequence:
GATGTGAGTTGTTGAAATCGAATGTGTCCCGTGTGTTTCAGCTGCTCTGCGATGATGTCACAGGCCTGAAGTTCAACCCCGTTCTCTACCCCAGGGTGAGCATCTCTCAGTTTCTCTCTCACTCCATCTGTGACTTACCTACTCCAGGCATCAGGGTGAACCGGGGCTCCGTTTGCTCCGTTTCACCCTAGTACCCGGCTCATCTGAATTAATATGTTCCTGAGCTCCAGGGGACTCACAAATCCATCTGCTTCACAGCGCCTCGGTCTGCCTTAGAGAAGCCTTGACCATCTCAAGGCTTCGCCGAGGTCTCTCAGGCATGGCGAACACAAATGCCTGAATTATGGAAAAAGCACTGACACACATATTTACCCCTGCAGGCGCTCTCGCTCACTTTCTGCTTTCTCTTGCCCAAGGCTTCGCAACTGATCGTCAGCTTTGATGAGCACGAAGTGAACAACACTTTCAAGTTTGGAGTCATTTATCAGAAGTTCGGTCAG[G/T]TGAGAGTTGCTTTCTTCAGTTTCAGACTTCCTCCTTTTCTCATTTATTCTCCTTTTTTTTTATTGTTATTGTCTCTTCACATCAGACATCAGAGGAAGAGCTGTTCGGGAACAACGAGGAGACGCCTGCATTTGCTGAATTCCTCAGTGTTTTAGGAGACAACATTGAATTGCAGGATTTTAAAGGGTGAGAGACGGAGATTGAACTCTGAAAAGTGCTGCTCAGGATCACCTGTTCACACTATAAAGGCCTACTTTAAAGTGTATTCATAGAGGCCGCTTGTGAATAATTTATTTAATTTAGCCATTGTACTTGATTTTGGCAGGATGTCTGCTTTCGGTTATCAGATTGATTTGCATGAGCTTCTGCTGAACTCTTTTGTCTGGTGTGTTATGTACAGGTTCAGAGGTGGTCTGGATGTGTCTCACGGACAGACGGGATCTGAGTCTGTATATACTACGTTTCGTCAGAGAGAAATCATGTTTCACGTTTCCACAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2799
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099895 Essential Splice Site 330 472 11 15
ENSDART00000126559 Essential Splice Site 381 700 13 23
ENSDART00000137817 Essential Splice Site 324 629 9 19

The following transcripts of ENSDARG00000061551 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28650669)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29368699
GRCz11 15 29301575
KASP Assay ID:
554-2844.1 (used for ordering genotyping assays)
KASP Sequence:
CATATTAGTGCAGGCAGAAAACCCTTGCACCGATCACACAACATACAAGG[T/A]TTGTCAACAAGCAGCTCACTTAATTACATCCAGATGGCCATCAATCCCTT
Long Flanking Sequence:
CCACAATGCAAATGTATTGTTATATACACATATATAAAAGAAATATGTATAAAAACCAATATAAAGCAATGCATAACGTTTTGGATTAAGTGGCTATATTTATTTGTACCATTTCATTTGTACATTGTATTACTATTTGCTCTTCCCCCAGTGATAGGTAAGTATAGGGGTGGGGTTTGTGGGCATGTCTCCCTTTAAAAATTGTATGTTTTCATATGCCATTTTACTAACAATACATAAAATAGTTACATTTCCTCGTGAGATCATGCTGGTATAAACATCAGTACCTGTTTGTTGAACCAAATACAATCGAAATATTTAGATGTAAATATCTCTCTCTCAGCTCCAGAGGAAGAGACATATTGGCAATGACATAGTGGCAGCCATCTTCCAGGAAGAGCCCACGCCATTTGTGCCTGATATGATCGCATCCAACTTCCTTCATGCCTACATATTAGTGCAGGCAGAAAACCCTTGCACCGATCACACAACATACAAGG[T/A]TTGTCAACAAGCAGCTCACTTAATTACATCCAGATGGCCATCAATCCCTTAACAAACACTGATCAGAGAAATTGACCGGTGTTCACAGGTGTCCGTCACGGCAAGAGAGGACGTCCCACCATTCGGCCCCCCTCTGCCAAACCCCTCAGTCTTTAAGAAGGTAATGTTAGAAGACTAGTTCTAGTGAAATGTGGCAGCAGATGATGATGATGTGTGTAGACCATTTTGAGGGATGTAAACAAAAACAATGGTCCCACCGTATTTCCTGTTTTACATTTTTAATATTTTATATATACATTTCTATAGCTTCCGAAAATCCAAAGAGAGCCACATATTGATGAATAATGTTATGATAGCTGTTTTAACATTAAGTTATGATTTAACTGCCTCTTCCTTCAGTTTTAATAACAAGCAGGAAATGTTTATGGGCAAATGACATGACTGCATTGAAATGGTCTATTATAAAATGATGGCTCAATTCTTCCGCAGGGTCCTGAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18310
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099895 Essential Splice Site 354 472 12 15
ENSDART00000126559 Essential Splice Site 405 700 14 23
ENSDART00000137817 Essential Splice Site 348 629 10 19

The following transcripts of ENSDARG00000061551 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28650830)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29368860
GRCz11 15 29301736
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACRTCCCACCATTMGRCCCCCCTCTGCCAAACCCCTCAGTCTTTAAGAAG[G/A]TAATGTTAGAAGACTAGTTCTAGTGAAATKTGGCAGCAGATGATGAWGAT
Long Flanking Sequence:
GTATAGGGGTGGGGTTTGTGGGCATGTCTCCCTTTAAAAATTGTATGTTTTCATATGCCATTTTACTAACAATACATAAAATAGTTACATTTCCTCGTGAGATCATGCTGGTATAAACATCAGTACCTGTTTGTTGAACCAAATACAATCGAAATATTTAGATGTAAATATCTCTCTCTCAGCTCCAGAGGAAGAGACATATTGGCAATGACATAGTGGCAGCCATCTTCCAGGAAGAGCCCACGCCATTTGTGCCTGATATGATCGCATCCAACTTCCTTCATGCCTACATATTAGTGCAGGCAGAAAACCCTTGCACCGATCACACAACATACAAGGTTTGTCAACAAGCAGCTCACTTAATTACATCCAGATGGCCATCAATCCCTTAACAAACACTGATCAGAGAAATTGACCGGTGTTCACAGGTGTCCGTCACGGCAAGAGAGGACGTCCCACCATTCGGCCCCCCTCTGCCAAACCCCTCAGTCTTTAAGAAG[G/A]TAATGTTAGAAGACTAGTTCTAGTGAAATGTGGCAGCAGATGATGATGATGTGTGTAGACCATTTTGAGGGATGTAAACAAAAACAATGGTCCCACCGTATTTCCTGTTTTACATTTTTAATATTTTATATATACATTTCTATAGCTTCCGAAAATCCAAAGAGAGCCACATATTGATGAATAATGTTATGATAGCTGTTTTAACATTAAGTTATGATTTAACTGCCTCTTCCTTCAGTTTTAATAACAAGCAGGAAATGTTTATGGGCAAATGACATGACTGCATTGAAATGGTCTATTATAAAATGATGGCTCAATTCTTCCGCAGGGTCCTGAATTCAGGGAATATTTCCTGACAAAACTGATCAATGCAGAGAACGCTTGCTACAAATCAGACAAGTTCGCCAAGCTGGAGGTGAGAAAAAGACATTCAGAAATCAACCTAACTGTTAGATTGTATTTTATATATAGGAAAAATATAAAGGATTCACTATCTGGTT
Associated Phenotype:
Not determined