ZMP
si:rp71-7l19.2
Ensembl ID:
ZFIN ID:
Description:
Novel NACHT domain containing protein [Source:UniProtKB/TrEMBL;Acc:B0S5W9]
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa18303 | Nonsense | Available for shipment | Available now |
| sa20299 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18303
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064309 | None | None | 126 | None | 3 |
| ENSDART00000139539 | Nonsense | 348 | 745 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 4 (position 29357748)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 30098216 |
| GRCz11 | 4 | 30052740 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCAAAAGGAGGAGTACTTCAGAAAGAGACTCACAGACCCGAATCAGGCC[A/T]GAGAAATCATTGATCACATTAAACAGTCAAATAGTCTCTTTATTATGTGC
Long Flanking Sequence:
AAGGAGTTGCTGGCATAGGGAAATCAGTCTCTGTGCAAAAGTTTGTTCTGGATTGGGCCGAAGGAAAAGAAAATCAAGACATAAACTTCATATTTCCTCTTCCATTCAGAGAGATGAACTTAAAGGAGAAAGAAAAACAAAGTTTAAAAGACCTCATAACTCAGTTTTTCATAGAGACTAAAGGACTGAACCTTACAAGAAGCACACGGTTCAAAGTCCTGTTCATCCTTGATGGATTGGATGAATGTCGTCTTCCTCTGAACTTTGCTGGTAATGAGACGTGTCGTGATGTATCTTCAGCAGTCTCTTTGGATGTTCTCCTGACGAACCTCATCAAGGGAAATCTGCTTCCTTCTGCTCTCATCTGGATCACCAGCAGACCAGCAGCTGCCAGTAAGATTCCTGCTGACTGTATCGACCGGCTGACAGAGATACAAGGATTCAATGATGCCCAAAAGGAGGAGTACTTCAGAAAGAGACTCACAGACCCGAATCAGGCC[A/T]GAGAAATCATTGATCACATTAAACAGTCAAATAGTCTCTTTATTATGTGCCACATCCCAATCTTCTGCTGGATTTCAGCCACTGTTTTCCAGAATGTTTTGAAGGAGAACAGAAATACTGAACTGAAACACAGGGCTAATGTTGAAACACTGCAGGAATCTCCCAAGTGTCTGACACAGATGTACACACACTTTCTCCGTTGTCAGATCCAGCAGAGCAGGCGAAAGTATGATAGAGAAAACACACCAGATGTCTCCTGGGATCAAAACCTCATCCTTTCACTGGGGAAACTGGCCTTCCAACAGCTGGAAAGAAACAATGTGATCTTCTATGAGAGCGATCTAAAAGACTGTGGCATTGACGTCTATAAGGCCTCGGTGTACTCAGGCATGTGTACTCAGATCTTTAAGAAGGAGACAGGAATCATTCTTGGTACCATGTACTGCTTTCTTCACTTGAGCATTCAGGAGTTCATTGCTGCACTTTATGAGCATCTAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20299
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064309 | None | None | 126 | None | 3 |
| ENSDART00000139539 | Nonsense | 684 | 745 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 4 (position 29356740)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 30097208 |
| GRCz11 | 4 | 30051732 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGATCAGACGAGTGTCTCATTAGACTATCAGCAGTCATCAAAACCTCC[A/T]AAAGAGCTCAGTAAGTCTAAGTCATTCTTTCTTTCATCTAAGCTATAACC
Long Flanking Sequence:
TCAACAAGAAACCTTTTCCTATTTTTAAGTTGAAAAGCAAAAATAAATGTCTGATTGATTTGCTAAAGGCTGCAGTGGACAAGGCTCTGGAAAGTGAGAATGGACATCTGGACCTTTACCTTCGCTTCCTTCTCGGTCTGTCACTCCAGTCCAATCGACAACTCTTACGAGGCCTGTTGACACAGCAGGATGACAGAGACAAGAGCAAAAAGAAAATAATTGCATACATCAAGCAGAAACTTGAAGGAAATCTGTCTCCAGAGAGATCCATCAATCTGTTCTACTGCCTGAATGAACTGAACGACCAAACTCTGCTGAAAGAGATTCAGTCTCACCTCAGTAGAGGAAGTCTGTCATCTGCTGATCTTTCACCTGCCCAGTGGTCTGCTCTGGTCTTTGTGTTGTTGACCTCAGAGAAGGAGCTGGAGGAGTTTGAGCTTCAGAAATTCCAGAGATCAGACGAGTGTCTCATTAGACTATCAGCAGTCATCAAAACCTCC[A/T]AAAGAGCTCAGTAAGTCTAAGTCATTCTTTCTTTCATCTAAGCTATAACCAATCAGTTCTTCAATGCAGTTTTTGAATCAGGGACAGCTTAGATCACATTTAGCTGGGTTTTCAATGAGTAAAAGTATGTAAAGCTAAGATGACAAGTTGTACTTACATAACTAAAACATACATGTTTTTTTTGTCCTCCACACAGGCTACAGTGCTGTAATCTTACTTTTCGTTCTTGTGAGAGTTTGTCTTCAGCTCTACAATCCTCAACCTGTGTTCTGAAAGAGCTGGACCTGAGTGACAATGACCTGCAGGATTCAGGAGTGAAGCTTCTCTCTGATGGACTGAAGAGTCCAAACTGTAAACTGGAGATCCTGCGGTAAAAACTCAACAACAACTAAAGGATAGTTACATATTGTGTTACCGAATGTAGACGCCTGTTAAATCGATCGGCAGATGAAGAAACAAAACATTTACAGGGATATGACTTGATTTAAATGTTTTGGCAA
Associated Phenotype:
Not determined