Busch Lab

ZMP

zgc:92107

Ensembl ID:
ENSDARG00000044874
ZFIN ID:
ZDB-GENE-041114-4
Description:
hypothetical protein LOC492329 [Source:RefSeq peptide;Acc:NP_001007296]
Human Orthologue:
ARHGAP39
Human Description:
Rho GTPase activating protein 39 [Source:HGNC Symbol;Acc:29351]
Mouse Orthologue:
Arhgap39
Mouse Description:
Rho GTPase activating protein 39 Gene [Source:MGI Symbol;Acc:MGI:107858]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa10787 Essential Splice Site Available for shipment Available now
sa18288 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa10787
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065955 Essential Splice Site 585 1067 3 10
ENSDART00000129211 Essential Splice Site 585 1067 3 10

The following transcripts of ENSDARG00000044874 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 11 (position 25960213)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24789038
GRCz11 11 25026654
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAAGAGAGTTATTTGTCTTTGCCDGAGACTTCTGGACCCCCCTCACAGG[T/C]ACTGCATAGATTMWCTGTTTGAYTCCTTATAAYCAGGTTGAATAATTTGA
Long Flanking Sequence:
GGAAGTGCACCACAGCCGACAGGGCAGCCAGGGATCTCAGGACTATTCAACACCACCTCCTCCTGCTGTTAGCTACCAGGACTCTGGTTACTCAACTGGTCCATCTCCCAGCATTCGGAGAAAAAGCAGGAGGAGAATAGCCCAGGGTCGCCCAGGCTCTGTGGGCAGCACTGGGGAGCTCACTGCTTTAAATGAGCGTCTCATGGAAGAGATGAGGGAGGTGGTCAGTCGCTCAAACACAATGCGGGAGACCAAAACCAGTCTGGACTCTGAGATGTCAGAAAGCTCTTCCTCTCAGCGCACACACAGCGTGGGACAGTGCTCCTCCAGGGAGGATGTTGCATCTTGCAGCAAGTCACTAAACAGGACAAATAACAATCCTAGTATGGCCTTCACACCTCTGGATATTCCAGGAAGACAGAAGCGGACTTATGAAAAAGTGGACACGCTTGAAGAGAGTTATTTGTCTTTGCCAGAGACTTCTGGACCCCCCTCACAGG[T/C]ACTGCATAGATTCACTGTTTGACTCCTTATAATCAGGTTGAATAATTTGACATATCATGAAATAAAAATTAACAATACGTTTGTTTAAAAAAAAAGTAAATGCCTTTATATTTTACACAAATGACTGCAAGTTATTAGGGCCATAAAAAGCATTCAAACCCATTTATAATGGGTTTTTTAGCTCAGTTTAGCATAGATTGTTGAATGGGATTAGACCATTATCATCTCACTCAGAAAATACCAAAAAGTTTCAATAATTTTTCTAGAGAAAACAGAATGACAGAATGAAAGTTGATATTTTCTAGGCAGACATGGTTAAGAATTATTCTCCCATTCCAGCATAATAATCAAGGGACTTTGCTCCCGTATCATGGCTACAGCATGCCCAATGATAATCTTGCAACCTTGGAGACATTTGTGAGAGACTCTTTTTTTTTTCAGGTGCTGCATAATATCATTGAGCCTCCAATTATTTATTTTTCGTTAGTAGTACAAGCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18288
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065955 Nonsense 655 1067 4 10
ENSDART00000129211 Nonsense 655 1067 4 10

The following transcripts of ENSDARG00000044874 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 11 (position 25964851)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24793676
GRCz11 11 25031292
KASP Assay ID:
2260-4296.1 (used for ordering genotyping assays)
KASP Sequence:
TCAGCCTCCACCCCCAGACACCAGCATGACMGACKGGGCCAGCAAACACT[T/A]GAACAYGCACACCCAGGGCCTTTTCCGGCGCAAAGTCTCTATTGCCAACA
Long Flanking Sequence:
AAAATGAGGCCATTGCTGGATATGCACTATTTTTTAGAGACATGGAAGGAGAAATGACTTGCTGTAGAAGTTTTCATGTCAGTGATTGGTCACACTTCATCTATAGTGAATTGGAATTCTTTATCTGTGGAGTTGAAACATTTTAGGGGACAGATCCTGCAGTTATAGCAGAGCAGAACATAGGGATGGAGACAGTTAAGTTCATTGAAAAGCAGTTTAAGAATCTCACGGTGTGTTGAAACAAGCTATTTTATGAATATTACCCTTTCATCTTGTTTCTCCTTATTTGCAGGCTGGAACTGTAGAGCCAAAGGCTCAGTTGGACAGCAGAAAGAAAGGTATAGTAGACAACAGAACGGGTTCCCTTGGCCCTCATCGTCACATAGCCAGCGAGACCAATTTACAGGGAGGTGATGGTGCTACCTACCAGCTTTCCTACGCCACCCTCCGTCAGCCTCCACCCCCAGACACCAGCATGACAGACTGGGCCAGCAAACACT[T/A]GAACATGCACACCCAGGGCCTTTTCCGGCGCAAAGTCTCTATTGCCAACATGCTGTCCTGGAATCGCGGCTCCATCAAGAAGCCCATGCTGATGACCAATGACCGCACTGTCCGCAAAGAAGCCTGCGAAATGTTTAAGTTGGTCCAGGCTTACATGGGGGACCGACCTTCACGTCTAGACCGCCGCCATGCAGCTCTCCTCATAGTCACTAAGTGCTGGGGCATGCAGGGCCTGAGGGACGAGCTCTACGTCCAGCTGGTAAGGCAGACCACAGGAAACACCAGCCCGCGAAGCCTGGCTGCAGGCTGGGAGCTCATGGCTGTGTGTCTGGCCTTCTTCGCTCCTTCACCCAAGTTCTGCTGCTACCTGGAAGGATACATTCAGCGGCACATAGAGCCAACCAATGACAAGAAAAGTGAGTTTGATTTTTTTATTTAAACCATATAGAAAATATTAATCATGCTAGTTGGTGTGTCTGCTAGGCTACAGAGAAAAAGTC
Associated Phenotype:
Not determined