ZMP
itga6a
Ensembl ID:
ZFIN ID:
Description:
integrin alpha-6 [Source:RefSeq peptide;Acc:NP_001138253]
Human Orthologue:
ITGA6
Human Description:
integrin, alpha 6 [Source:HGNC Symbol;Acc:6142]
Mouse Orthologue:
Itga6
Mouse Description:
integrin alpha 6 Gene [Source:MGI Symbol;Acc:MGI:96605]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa18258 | Essential Splice Site | Available for shipment | Available now |
| sa21422 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18258
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082153 | Essential Splice Site | 333 | 1071 | 6 | 25 |
| ENSDART00000114168 | Essential Splice Site | 333 | 1092 | 6 | 25 |
Genomic Location (Zv9):
Chromosome 9 (position 3453234)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 3485255 |
| GRCz11 | 9 | 3456784 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCGTCTTCATTTGGAWATGATGTAGCTGTGGTGGACCTCAATGGAGACGG[G/A]TGAGCCACACAAGATGCYACAAACATCTTAGCAACAWGCTCTAATAGTGT
Long Flanking Sequence:
GAGATTTTGAAGTGTGCATCTAATGAACACTAAGCCATCCCATAATATATCATAAGATAATTCTGACGCAGGAGAGTCATGTGATAACGACAAATGATGGGATGTAGTACATCTCAATTTCGTTCATACTAATTAGATTCATACTGTGTAGAACACACTTTTCCAACAGTCGTGTAGTAAAGTCAAATTCAAATGTAGTACCTACTCGAGTAGTCTGCGATTTGGGACACAGCATTGTGCTTTGATGTTTGCGCACTGAAGCTCACATACATACATGCATTTTCAGGATTTTCCCTGGATTCCGGCCACAGCATCACAGAGAAAGGCAAACTCATCATAGTGTCAGGAGCGCCGAGAGCCAATCACAGCGGCGCAGTGGTGTTTCTGCGCAAGGAAGGCGAGCTGTCCTCCATGCTCACACCTGAGCACATTCTGGAAGGACCAGGACTGGCGTCTTCATTTGGATATGATGTAGCTGTGGTGGACCTCAATGGAGACGG[G/A]TGAGCCACACAAGATGCTACAAACATCTTAGCAACATGCTCTAATAGTGTTAAAGTCTGCATGAACCAGAAGCTGCAACTGCTTTTTTTTTTCGCAATTTGACTTAGTTCCTAGAGAAATGGAGTATTAAAGGAGAAAATTGTGGGTGTGGCTTGTTTTTTCAACTGTGAGCTGATTGGATGTAGTAAAGTATAGGCATTTCATTCAGAAAGCTTGGGAAAGGGGTTTGGGGAGAGTTATTACAACCTAGCAGACTCCTCCTCCTCACCATTTCTGTTTGTTATCAATGAGAGTGTATAGGTGTTTCCCAGTATTGGGTTGCAGCTGGAAGGGCATCCGCTGTGTAAAACATATGCTGGAATAGTTGGCAGTTCATTTCGCTGTGGCAACTCCTAAGCCGAAGGAAATTTAATGAAGTAATGTTAATAATAATAAGACAAAGTACTTGAGTATGATAAACTAAGTATGCTAACTTGTCTACTTAAAGTAAGTATGTATGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21422
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082153 | Nonsense | 518 | 1071 | 11 | 25 |
| ENSDART00000114168 | Nonsense | 518 | 1092 | 11 | 25 |
Genomic Location (Zv9):
Chromosome 9 (position 3460712)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 3492733 |
| GRCz11 | 9 | 3464262 |
KASP Assay ID:
2260-1408.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTTGACAGTGGAAGCGTGTTTCTCCTATAGAGCAAACCCCACAACCTA[C/A]AACCCCAAGATCAGTAAGTGCTCTCATCATCTATTAGTTTAATATGATTT
Long Flanking Sequence:
ACACCGAAGGAAATTGACTTGACGAAGAAAACATGTGGCAACAGTATTTGGTGGGGAACTGCTTGAACACACATTACTTACAGTTGAAGTCAGAATTATTAGACCCCCTGTATATTTTCCCCCAATTTCTGTTTAACAGACAGACGATCTATTCAACACATTTCTAAACATGATAGTTTAATCGAAAACAGATATTGGCTAATATTGGCTAATAATATTGACCTTACCATGGTTTTAAACATTTTTAAACTGCTTTTATTCTAGCCAAAATAAAACAAATAAGACTTTCTCCAGAAGAAAAAATATTATCTGAAATACTGTGAAAATTTCCTCACTCTGTTAAATATCATTTGGGAAATATTTGAAAAAGAAACTGCATAACTGCAACTGTATATCTGTGCTAGACATCATGAGTGTACCATGCTTAGACATTAACGTGTGTTTCTTTACAGCTTGACAGTGGAAGCGTGTTTCTCCTATAGAGCAAACCCCACAACCTA[C/A]AACCCCAAGATCAGTAAGTGCTCTCATCATCTATTAGTTTAATATGATTTTATCTTAAGGTCTATTCACACCACAGACCATAACTATAATTATATCTTTGATGATCAAAATCAATTTCAAGATGTTTGTTCAGTCAGTAAATGATTAAAGTTTTTCAATCAATTAGAATCTATCTGATCTCAAAAAGCTTTAGGATTTAAACATGGGTATAAATACAAGCATATAATATACACCAAGTATATTAAGTGGCACTTTTTTTTACTATATTAACATTTTTTACACTATCTTTTTATATTTTCACTATAACCAAACATGCGTGATCGATTAAGTAGTGAAAAGTGTGTGTGCGCGAGACTTGTCAACAGTCTCACGTGCTACTGCTCCTTTTTGGGATTTAAAAAATTTGTCTGGGCATTCTAAATCTCCTAAAATACCCGGGATTCAACCTTTGCTTTCTAAAGCTGTGATTAATTGTATGCGTTTTTGCGTTACTTAAGCCT
Associated Phenotype:
Not determined