Busch Lab

ZMP

ebf3

Ensembl ID:
ENSDARG00000016300
ZFIN ID:
ZDB-GENE-070112-292
Description:
transcription factor COE3 [Source:RefSeq peptide;Acc:NP_001074071]
Human Orthologue:
EBF3
Human Description:
early B-cell factor 3 [Source:HGNC Symbol;Acc:19087]
Mouse Orthologue:
Ebf3
Mouse Description:
early B-cell factor 3 Gene [Source:MGI Symbol;Acc:MGI:894289]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa18240 Essential Splice Site Available for shipment Available now
sa22167 Essential Splice Site Available for shipment Available now
sa35372 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa35371 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa18240
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085381 Essential Splice Site 297 548 10 16
ENSDART00000138241 None None 128 None 3
Genomic Location (Zv9):
Chromosome 12 (position 44171339)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 42392450
GRCz11 12 42547739
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTGGTGCAGTTTGCAAGRTCCTAACCAAGTTTATCYATTCTCTCCTAT[A/G]GCTCATTACACCCCATGCCRTCCGAGTGCAGACCCCTCCRAGACACATCC
Long Flanking Sequence:
GGTCTTGCAAAACAATTGAACAATTAGGGGTGAAATATCTCAGAGGGGGAAAAGCCGAGCGAGGGAAAGCAAGGAAAACAGTGAAGGAAAGACATATGGAGATGATTTTCGCAGGACTCCTGCCCCTTGGCCTTTCCTGGGCTCAGTGAAATCCAAGGTCTATTTGCTGACGTTAACTCTGAAGCGGAGAGGGGGAAACAAAGAAGGTTTGCAGGTTCGGTTAGGAATGGCCTCTGTTTGACAGGTTATTTTACCAGTTGGGCAATTGCAGATATGCAACAACTCTAAGCAAGCTTGTCCACAGTCTTTATAAGTTGGTAAGGTCCCAATTCTGAGACTTAAGTCAGTTCAAATTATCCATGAACAAGACACATGGAAATCCCCCACTTGGGCGTTAGTTTCTACCTGAAAGGCTGCAATTTCTTTGCCAGGTGTTGAAATGCATGCAACATTTGGTGCAGTTTGCAAGGTCCTAACCAAGTTTATCCATTCTCTCCTAT[A/G]GCTCATTACACCCCATGCCATCCGAGTGCAGACCCCTCCGAGACACATCCCGGGCGTTGTAGAAGTCACCCTGTCCTACAAGTCTAAGCAATTCTGCAAAGGTGCACCGGGCCGATTTGTGTACACAGGTGAGTTGCAATTGGATCAGTTGAACTGTGCGCAGCTTCCATCCATTCAAGTGTTTGGCTCCATCCTTAAGTACTGAACCCCGACCAGTGTGAGATGCATGCCTCTGTAACCCTATATCTCCTCCATCTAAGGCAGGGCAATGGAGTTGGGGGCAGCTGCCAACTCCAGTTAATCTCAAACCTTGACAACACATTTTAGACTCCTGCACTCAGTCCTCTCCTGTGCACAAAAACACTAGTGCTTCTTGTCGCCCAAGTTACTCATGTGTGCATATGTATGTGTGACCAGCATTGTGGATCTCGGACTAATCTTTCCCTCGGTACAGCTGATACTGGAGGTTACACGGTCACACCATGTTTGACCTGGAAGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22167
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085381 Essential Splice Site 368 548 11 16
ENSDART00000138241 None None 128 None 3
Genomic Location (Zv9):
Chromosome 12 (position 44151775)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 42412014
GRCz11 12 42567303
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCAGAAGGTCATTCCCAGACATCCAGGTGATCCGGAGAGGTTGCCCAAG[G/A]TCAGTGATCCTGTGTGTGTGCGTGCTTGTGTGAAGCAGCTATTTATCATA
Long Flanking Sequence:
GAAGGGTTGCAATAGCCAGACATATGTCATCATTGCCCGTTGCCCATAAATCCAGCGGGTGCTTCAGGAAGTGGGACTGATGCAGACTTCACAGGGTTGACAGTCGCAATCGAGCGTGTGTGTTGTGTTTCATTCATAATGCATCCGCTAACTTCTTTAAATTTATCTGATCAATTATAGCCTAGTTTTTTTTCCAAATAGGAGAGGTGATAGATGCGACTCTACATGGAGTATTTCACACCACGTTATTACCTTTTATTCAAATGCTCAGACCTATCTGGAATAAAATGCATGACGGGTGCAGGAGCGAATGTAATAACATTTATGATGGCGCATATGAAAACACAAATCTCTTCATTTGTTTTGCCTGGGCAGGATGCTAACCGATGGCTTTCTTGTTTTGCGGTTTAGCACTGAACGAACCAACTATTGACTACGGCTTCCAGAGACTGCAGAAGGTCATTCCCAGACATCCAGGTGATCCGGAGAGGTTGCCCAAG[G/A]TCAGTGATCCTGTGTGTGTGCGTGCTTGTGTGAAGCAGCTATTTATCATAGAAATGTCAAAATGGGGAAACAATTCACTGGCTTAGATGAGCAAACGCATACAATCGCTTTTGGCAAGTCATCACTATGCAATCCGGCGTGTTTGGATTCCGCCGGAATCGCGCAAACTTTCAGCCCATCGAAATGGTTCAATTAAGTGTTTTTCCACCCCAGTAGGCAGTGGCGATTGTAATCTAAGCGGAGGCCCTTTTTCAGATGTGTGATTATTTTGGTCTTGTTTTCCTTTCATTTTCCAAAGCTAGATCCAGTTTAATCTTTTGTTTACAGAGCTTCCCGTTAAAAGTCCTTGTCTTAGCAGGTTAATAAATGAGTTTTGCACACGTTAATATGGGCAAGCCCTCTTTCTGGGCTTTTTAGCTCCATTTATTTATTTTTCCCCAGCCTAAATTCCACAAATCATGCAGTTTGCCTGCGGTTCCCATGTGGTCGACACGTATCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35372
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085381 Essential Splice Site 369 548 12 16
ENSDART00000138241 None None 128 None 3
Genomic Location (Zv9):
Chromosome 12 (position 44146878)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 42416911
GRCz11 12 42572200
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGCTGATGGTGTTTATATGTCTTTATGACTGATTATGTTGCATATTGC[A/G]GGAGGTGTTGCTAAAGAGAGCCGCTGACCTTGTGGAAGCGCTGTACGGGA
Long Flanking Sequence:
TTCACTTTATTGTCCTAAAGAAAGAGGAATGGGCATTGAACTCTTCTGCAAATTTGGGGCACGAATTAGGGGTGAGATGTTGTCTTTGAGGACTCTGCCAGTTTAATTAAGATATGGAAAATGACTCATTGTTCTTCTGAGCTAAAGTGCGTGGAATTAGCAGCCGAACGTGGCGTCTGTGTTTGACTCAGTGCCGCGTGCTAGTGTTTGTTTGTTTAATACACGCAGGGCCTTATGTTGACTCATTTAGCTTAAGTTACACATCACTTCACTAGTCTAACTAAGTCAAATGAAATGTGACTAAGAAATAAAAGAACGCATTCGATAAAATATAATTAAAAAAGTGGTTTGTTTCCACTCGTCCGCTTGTGTATTCTTTCCCCAACCGGAGATAAAAGGCTTATGATTTACCTAGACCCACATGCACGCTTATTGTTCATGTGCAATGCACTGGCTGATGGTGTTTATATGTCTTTATGACTGATTATGTTGCATATTGC[A/G]GGAGGTGTTGCTAAAGAGAGCCGCTGACCTTGTGGAAGCGCTGTACGGGATGCCACACAACAACCAGGTACAAACTCATGCTAATGAAGCACCTTTGCTTTTCCCTTCCTTTGCATGGTGGCAGTAATTAAATCAGCATTCGTCTCCTTTTGCAACATTCCTGTATGTTTCAAAGCTTGCTGGGGGCCTTTGTACTGTAGCTGGGTGAAAGCTTTTTCTTCTTCACACTTTCATTCACTGCTGCGACTCTTGGTGCGAAGTGATGAGTTAATCACTCAAAACGCATGCACGCAGCCATATACAGGCTTACTTAAATGGGAGGATAACCTTGAACTTGGCCCTAAAAGGTGCACTTCTAGAATATATTCCACAGAGCGGTCCAGCTATGCTTGAGAGGTCTAATACATATTCAGAAGAAATGATCCATTACATTATTTTCCCCTAGCCGAGTAGCACAGAGGTGAAGACATTGCAATACAACTATTGCGAAACGTGCTGCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35371
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085381 Nonsense 507 548 14 16
ENSDART00000138241 Nonsense 51 128 1 3
Genomic Location (Zv9):
Chromosome 12 (position 44144779)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 42419010
GRCz11 12 42574299
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTACCTAGTTCACCGGGCTTCTTAAATGGCTCCTCTGCGAACTCTCCCTA[C/A]GGCAGTAAGTATCAAGGTAATGACGAGCTCCCCGCTCTCTCTGTCCCCAC
Long Flanking Sequence:
TTGAGTAAACCTGGCCGTAGTATATGTGTGTGAATGAGTGTGTTTCCCAGTTCTAAGTTGCAGCTGGAAGGACATTCGCTCCCTTAAAGTACAAAGTGTATTGGTGTTTCCCAATACGTGCTAGGTTGTGCATCCACTATGGAAAACCTATACCAGAGTAGTTAGTTCAGTCCTCTGATAAATCAGAGACTAAGCCGAAGGAACACGAACGACTATATTTCACTTTTAAATAAACACACATGCTTATAAATTGTTTCATCTTGTTGTACATAATGCAAATTGTGGCAGCTTTTAACCAAAGTCTTTCTATCCACAGTGGGCTACAGTCGCAACACGAGCAGTGTGTCACCTCGCGGTTACGTGCCTAGCAGCACCCCGCAGCAGTCCAACTACAACACTGTCAGCAACAGCATGAACGGCTACGGCAACACAGGGATGCCCAACTTGGGTGTACCTAGTTCACCGGGCTTCTTAAATGGCTCCTCTGCGAACTCTCCCTA[C/A]GGCAGTAAGTATCAAGGTAATGACGAGCTCCCCGCTCTCTCTGTCCCCACCTGTGCTTCCCTTTCTTTTCGACACTCCTTTGTTGTTGTTCTGTTGGTTGTTTGTTTGTTGGTTTGTTTTGTTATCTTTTGGGAATGTGTGCTACTGGATAAAAGGAGGGGTGACTCTGGAGGCTGAACAACCGAGACATTTAGCAAATCCGACCAATCAAAGCAGCTGATTGAAACCAACAACAAAAAAAAAAACTGCAATTATAAAGCAGGCCACCAAAACAGCACTCAAAATCAAAAAAAAAAAACCCAAACAATTAAAAATCTCAAATGTTTTCGGCAAAGTGACCCAATCAGAGTCGATAAGAACGCCTATTATCCAGAAAGTGGCCAAGGCAGGACATCTCTCATCCCATTTCAACTCCATTTACCTGATTGATTTGCTCGTTTGTTTTTAGTCCCCCCCCCAAAAATGACCCAAATTTTTTCCCTCATAACCATTTCTCCCTG
Associated Phenotype:
Not determined