ZMP

ncanb

Ensembl ID:

ENSDARG00000005783

ZFIN ID:

ZDB-GENE-050208-586

Description:

Novel protein similar to vertebrate chondroitin sulfate proteoglycan family (CSPG) [Source:UniProtKB

Human Orthologues:

ACAN, BCAN, NCAN, VCAN

Human Descriptions:

aggrecan [Source:HGNC Symbol;Acc:319]
brevican [Source:HGNC Symbol;Acc:23059]
neurocan [Source:HGNC Symbol;Acc:2465]
versican [Source:HGNC Symbol;Acc:2464]

Mouse Orthologues:

Acan, Bcan, Ncan, Vcan

Mouse Descriptions:

aggrecan Gene [Source:MGI Symbol;Acc:MGI:99602]
brevican Gene [Source:MGI Symbol;Acc:MGI:1096385]
neurocan Gene [Source:MGI Symbol;Acc:MGI:104694]
versican Gene [Source:MGI Symbol;Acc:MGI:102889]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa18086	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa18086

Status:

Available for shipment
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Availability:

Order Allele From ZIRC
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Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000005724	Essential Splice Site	1054	1268	28	33
ENSDART00000135716	Essential Splice Site	76	309	2	7
ENSDART00000141563	None	None	320	None	4

Genomic Location (Zv9):

Chromosome 22 (position 18137384)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	17888319
GRCz11	22	17913297

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTTTGYGTGTCTGTGTTTGCCCAGTTATGGAGGAGCCACTTGTGAGAAAG[G/T]TAATGCAATAACACATGCACACTTATGGCCTAATGAAGTAATAATTAGAA

Long Flanking Sequence:

TCATCATATTTGCTTGACTAATTCCCCCTTGCATATACAAAGATTTTATATTTTCAGCTGGTTCACTTTCATTCGTTTCCCTTTTTTTTTTGCACAAATGTGTTTGTAAGATCAGTCCAGGTCATTATAATAGTGATTTCAGTCCAGGCGTTGCAGTAGTTCATTGCCGAAATGCCAGCAAGACATTTTACCTCAGTAATTGGAAATATAGCAATGTTAGGACATATGTTAGTTTGGAAATAGAAAAATAATGAGAACAAAATCGCAACATTCTACTGTGTCATTTTGAGGCACCTGCGGTACTTTCTCAGCTCTAATGAAAAAACTCCAAGCCAATGTTTTGTTTCTGAAATTAATACTCTTTCTGGGTTTGTTTGTTCTCACAGATATTGATGATTGTCAGTCGAATCCATGTCAGAATGGAGGAACCTGCATTGACGAGATCAACTCTTTTGTGTGTCTGTGTTTGCCCAGTTATGGAGGAGCCACTTGTGAGAAAG[G/T]TAATGCAATAACACATGCACACTTATGGCCTAATGAAGTAATAATTAGAACATTTTGAAAGTGGGAAAAATCCTGATTATGATCTGGTATAAACAACATTCTTATTAATAATTCTCAGACATGTTTCTATAGTCTTTTGTATCACCTTGTCAAGTACACCCAGTAAGTTGCGAAAATTATTAGCGATGCTCGAATCAGGATTTTTGGAGCCGATACAAAGTATGATACTTAAGTGGAGATCTCTTCTTTTCTTAGAGAATAAATGAAGGATGTTGCATATAATCCTTTGAAAATGTCTCTTATAAACATTTAGTGTAGACATGTCATGGTCAGAAGAAGCTTTACAAGCTTTACAAGAAGAAGCTTTAGCTTGGAAACATTGCAAATGATGGAAGAGGAATTCCTCAATGCAGAAGAAGTTTGGAGTGCATATTACATACATAGAAAGTTAAAATGCATCTTACTCTGCTTGTACACCTATAAACGAACACTTGCAATTG

Associated Phenotype:

Not determined