ZMP
pdcd5
Ensembl ID:
ZFIN ID:
Description:
programmed cell death protein 5 [Source:RefSeq peptide;Acc:NP_957471]
Human Orthologue:
PDCD5
Human Description:
programmed cell death 5 [Source:HGNC Symbol;Acc:8764]
Mouse Orthologue:
Pdcd5
Mouse Description:
programmed cell death 5 Gene [Source:MGI Symbol;Acc:MGI:1913538]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18058 | Nonsense | Available for shipment | Available now |
sa29054 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa18058
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000039495 | Nonsense | 6 | 128 | 1 | 6 |
Genomic Location (Zv9):
Chromosome 18 (position 30993849)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 31126794 |
GRCz11 | 18 | 31105126 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCTCTTTGAAAGTTCGGTGTGAATTTACAGAAATGGCTGATGAAGAAT[T/A]GGAAGCTATAAGACAGCAACGTATGGCCGAACTGCAAGCAAAACATGGGG
Long Flanking Sequence:
ACATGCACAGATGAATTGTTCAGCTGACAAAAACAATATGATTTCATGTGTACTTTAACGAATGTGTAGCATTTTACAGTACATATTATGAAAATATTTTAGTTTACATACCCTCTAATAAAAAAATAAAATCTTTCTTTTCTTAAACGGTCACTCCAATCCAATAGGTGGCGGTAGTTAGGTTGTTTTCCAGTCGCATAACGCTTCAAAAGAAGAAGAGGCCTTTCTACTAGCTGCATGCTATTTTTGGAAAGAAGTTCCTAACGTTGTCCGCCATAAAAAGAAATTTTACGATTCGATCTTCATAATAATTCAAAGCTGCGGGAGCTACTATACCAAACTCTGGATTTCTGCAGTGTCAATGACGTTCGACTAATCTGTTTATAAATAACACAACCTTTATCAAACGTAGCTTCTCTCACACAGGCAGAACACACAATTCGAATCGCATTTCTCTTTGAAAGTTCGGTGTGAATTTACAGAAATGGCTGATGAAGAAT[T/A]GGAAGCTATAAGACAGCAACGTATGGCCGAACTGCAAGCAAAACATGGGGTGAGAGAAACGGAAAGAAACGACCTAAATATAACATGTATATTAAACAACACATTCCAGATCCTAATATAAACCATATCTGTGCTCGTCATTGGTACTAGTCAGCACCACCAGCTAGTGTATTTAAACCTTCTTTGATCTTTTCAAGTTTCGTGTTCGCTGTCAATTCAGTCGTAACGAGTTAAATTATGACCATAGTAACATTATTAAAAAAAAGCAATTTCTACAATGTTAAGGAATACCTTATGTATGTATGTATGTATTTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATATATATATATATATATATATATATATATATATATATATATATATGTATATGTATATGTATGTATATATATGTATATGTATGTATATGTATGTATATATATATGTATATGTATGTATATGTATGTATATATATGTATATGTATGTATATATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29054
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000039495 | Nonsense | 58 | 128 | 4 | 6 |
Genomic Location (Zv9):
Chromosome 18 (position 30981988)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 31114933 |
GRCz11 | 18 | 31093265 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAAAATCTGCAAATGTCTTTTGAAATCCTTTTTTCTTCTGCCCTTTTAG[T/A]GAGTAATTTGGCTCTTGTGAAGCCAGATAAAGCAAAAGCTGTGGAGAATT
Long Flanking Sequence:
CACTAGTGTAAACGGGGCCTAAGGTGCTATCTCTATACCTGCTAGGTTCGTTCACTCTTGAGAGGTTAATGAGGTGAGCCATCATGTGGTCGTACAATAGCCTTTGTTATTGGTTCAATGACAGTGTTATTTAATATCTTTGTTTCAATAATATGATTTTTCGATTTAAGAAAAATCCATTTTAAGATGAAAATTTTAATTGATATGAAAAATCACCCTTCTCTATATTGATCACAAAGAAAACGAGCTCATGCTTGAACATGGACAATGGACAAGCAGCAGCTGTCACTAAATTGTTTGTTTAAGTGTTAATCTACATTTTCTACAGTGTTTCTGAGACCATTAGAATTCCATCTTTAAGCAAGCTTTTTTCCTGTTAGGTTTTCTATTTTGGTGTACTATATGCATCTGCAATGATCTTTGAAAATGAACAACTGTTGTATTTAAAAATAAAAATCTGCAAATGTCTTTTGAAATCCTTTTTTCTTCTGCCCTTTTAG[T/A]GAGTAATTTGGCTCTTGTGAAGCCAGATAAAGCAAAAGCTGTGGAGAATTACTTGATACAGATGGCTCGGTTTGGACAACTTGGAGGAAAGGTAAGAAGTTAGATGCCAAAAGGAAAGATTATGATGTGACAAACACTTAAAATACTTGGTCTCCCATACTTAGAATGTTGTACTCTGCGTTTCACCCATTCAAGTGCTCACACATGGCTTTGAGTCAAGAACACGCTCCAGAGCATTGAGCTTCTTTTTTTTTTTTTTTGCTGTGGCACCTTAGTTGGGGTTTTTTTCATTACTCCCCCACCTACTGTCTCAGTTGGTATCCAGACTCTTTCGGCTATTTAACAATTAAGTCATGACTGAACTAAAGTAAAGCCTCATACATCCCCAATGCTGTGTAGGCCATGTGTTCAACAAAAGCATGTAAAAGTTGAAAATCCCAGAACTTATCTGAAAATGTACAATTGTGGCCACTTGAGTGCACTTCTCTCAAATATCAACA
Associated Phenotype:
Not determined