ZMP
scg5
Ensembl ID:
ZFIN ID:
Description:
neuroendocrine protein 7B2 [Source:RefSeq peptide;Acc:NP_957020]
Human Orthologue:
SCG5
Human Description:
secretogranin V (7B2 protein) [Source:HGNC Symbol;Acc:10816]
Mouse Orthologue:
Scg5
Mouse Description:
secretogranin V Gene [Source:MGI Symbol;Acc:MGI:98289]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa43463 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa17856 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa43463
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045249 | Nonsense | 119 | 219 | 3 | 6 |
Genomic Location (Zv9):
Chromosome 20 (position 29499890)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 29571103 |
| GRCz11 | 20 | 29473982 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCAAAGATTTCAGCGAGGACCACGGTTATCCTGACCCTCCCAACCCTTG[C/A]CCCCTTGGAAAGACTGGTATGCAGGTTCAAATGCTCTAATATAGTGGAAC
Long Flanking Sequence:
TGACACACACGGTTTTTCTGAGTGTCATCTTCAGCCTGATAGCCGTGGTTTCTGGCCGCAGTCCACGCACTGTGGATCAGGTGTCGGAAGCGGACATCCAGCGCCTGCTTCACGGTGTAATGGAGCAGCTGGGCATCGCGCGGCCCCGGGTCGAATATCCCGCGCACCAGGCCACCAACATAGTTGGTCCTCTCAGCATCCAAGGTATACGTTTCTCTCTGTATATAACCTATTTGCAGATGAATTACATTTTAAATGATTATACATATAGGATGTAAGAACTTGTAAATAAGTTTAAAGGTTTGTTCTTATATAATGCTCTTCATTATGCGGCTGCTTTAATGTCATTTTGAACTTTGTCCAATAGGTGGTGCTCATGAGGGGCTCCAGCATCTCGGGCCGTATGGGAACATCCCTAACATTGTAGCAGAGTTAACAGGGGACAGTGTTCCCAAAGATTTCAGCGAGGACCACGGTTATCCTGACCCTCCCAACCCTTG[C/A]CCCCTTGGAAAGACTGGTATGCAGGTTCAAATGCTCTAATATAGTGGAACATCAATTCATTCTGTCAGTAACCTAAAACCTGAATCAATTTTTCTGAGGAAAGAAAAAAATTCCAATTGAATTAAACCAAAGATTCAAACGGTATGTGAACAGCCTGTGCATATCTTTTAGTTTCTAAAATGTGTACATGTTTTTCTAGCTGCAGATGGGTGTTTAGAAAATTCTCCAGACACTGCAGAGTTCAGTCGAGAGTTCCAGAAACATCAGCACCTTTTTGACCCAGAGCATGACTATCCTGCACTGGCCAAGTGGGTGAGTTCACTTTGAAACTGGCTGGAGGAAACTTCAAACTTGTAATTTTAATAAAACTATTTGTTTTGTGAATTATGCAGTAAAGTTAGAACTAGATTTAAAGTCTCTCAGTTTTTTATCTCAGACTTTTCATGTACTATTTATTAGGATAAAGCTGTAATTAAAAGATATCAAGTACTTTTCCACAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17856
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045249 | Essential Splice Site | 124 | 219 | 3 | 6 |
Genomic Location (Zv9):
Chromosome 20 (position 29499873)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 29571086 |
| GRCz11 | 20 | 29473965 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGACCACGGTTATCCTGACCCTCCCAACCCTTGCCCCCTTGGAAAGACTG[G/A]TATGCAGGTTCAAATGCTCTAATATAGTGGAACATCAATTCATTCTGTCA
Long Flanking Sequence:
CTGAGTGTCATCTTCAGCCTGATAGCCGTGGTTTCTGGCCGCAGTCCACGCACTGTGGATCAGGTGTCGGAAGCGGACATCCAGCGCCTGCTTCACGGTGTAATGGAGCAGCTGGGCATCGCGCGGCCCCGGGTCGAATATCCCGCGCACCAGGCCACCAACATAGTTGGTCCTCTCAGCATCCAAGGTATACGTTTCTCTCTGTATATAACCTATTTGCAGATGAATTACATTTTAAATGATTATACATATAGGATGTAAGAACTTGTAAATAAGTTTAAAGGTTTGTTCTTATATAATGCTCTTCATTATGCGGCTGCTTTAATGTCATTTTGAACTTTGTCCAATAGGTGGTGCTCATGAGGGGCTCCAGCATCTCGGGCCGTATGGGAACATCCCTAACATTGTAGCAGAGTTAACAGGGGACAGTGTTCCCAAAGATTTCAGCGAGGACCACGGTTATCCTGACCCTCCCAACCCTTGCCCCCTTGGAAAGACTG[G/A]TATGCAGGTTCAAATGCTCTAATATAGTGGAACATCAATTCATTCTGTCAGTAACCTAAAACCTGAATCAATTTTTCTGAGGAAAGAAAAAAATTCCAATTGAATTAAACCAAAGATTCAAACGGTATGTGAACAGCCTGTGCATATCTTTTAGTTTCTAAAATGTGTACATGTTTTTCTAGCTGCAGATGGGTGTTTAGAAAATTCTCCAGACACTGCAGAGTTCAGTCGAGAGTTCCAGAAACATCAGCACCTTTTTGACCCAGAGCATGACTATCCTGCACTGGCCAAGTGGGTGAGTTCACTTTGAAACTGGCTGGAGGAAACTTCAAACTTGTAATTTTAATAAAACTATTTGTTTTGTGAATTATGCAGTAAAGTTAGAACTAGATTTAAAGTCTCTCAGTTTTTTATCTCAGACTTTTCATGTACTATTTATTAGGATAAAGCTGTAATTAAAAGATATCAAGTACTTTTCCACATCCAATCTATTCTACATG
Associated Phenotype:
Not determined