ZMP

si:ch211-250m6.7

Ensembl ID:

ENSDARG00000068874

ZFIN ID:

ZDB-GENE-041210-239

Description:

Novel protein [Source:UniProtKB/TrEMBL;Acc:Q5RJ13]

Human Orthologue:

PTCHD3

Human Description:

patched domain containing 3 [Source:HGNC Symbol;Acc:24776]

Mouse Orthologue:

Ptchd3

Mouse Description:

patched domain containing 3 Gene [Source:MGI Symbol;Acc:MGI:1921925]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa40342	Nonsense	Mutation detected in F1 DNA	Not yet available
sa20320	Essential Splice Site	Available for shipment	Available now
sa17796	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa40342

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000099761	Nonsense	199	826	1	4

Genomic Location (Zv9):

Chromosome 4 (position 61361930)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	76257976
GRCz11	4	77623561

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTGTAGAGACACAGCCAAACAGCTCAATGCTGAAAAGTGCCAAAGCGATC[A/T]GACTTTATTACTTCCTAGATGAGAAGAAGAGCAAGGGAAACGCAGACTGG

Long Flanking Sequence:

TATTATCTTTATATGTAGCTGCTGGTCTTGGAGCGGGGTTCATCTTCCTCAAGGAGAGGGAGGCAAACGATATCGAAGACCAGTTCACACCTGTCAATGGACCTGCCAAGCGGGACAGAGAGATCGTGGCTGAACACTTCCCTCCATCTGATGAGTTTTCCCAGTTAAGGCTCATGTCTGAAGGCACGTACGCCTCTTTAATCATCACAGACTTACAAGGAGAAAATATATTAACTGCAGCAGCTTTCGAAGAAATCCTAGCGCTAGACAGACAAGTCAAAACTTTACAACACCTGGGCAACACCTTCGAGAAGCTCTGTGCCAAAATAAGGGGAAACTGTGTGTCAAATGCAGTTTTAGACATTATTCGGTATAATGCTGCCGACATAGATTCTGTGACCATAACATATCCGATCAACGACAAAACATTTTTGGGAACAACCATCGGTGGTGTAGAGACACAGCCAAACAGCTCAATGCTGAAAAGTGCCAAAGCGATC[A/T]GACTTTATTACTTCCTAGATGAGAAGAAGAGCAAGGGAAACGCAGACTGGCTTGAAGGCTTTATAGAGTTCTTCTCTAATTACACAGACCAGGAAAAGGTGAGTGAAGATGATCGAGAGGTCCTTCAGCATGGCCTAACACACACACAAACAATCTCCAATCACTGTAACCCATTCCTTAAAGACATCTGAAGAAAACACAGATACATTTGCTCGATGTTTCTCTGCTGGTGTCGTGACCTGTGCTAATCTGCCATGATCATGTCTTCACTGCAGCTCATTAATGTGTGTGTTGGATCTCCACAGGTCAGTGTGTCTTACTTCACGTCAGTGTCAAGACAGAATGAGTTTGAGGGCAATACAGACTCCGTGATCCCTCTGTTCTCCATCACATACGCCCTGGCCATCAACATTGCAGTTCTTTCTTGTTTGAGGTACGCAGTATTCAAATAATACTAATCTAAGTACCTAATCTAAGAGTGTGAGACAGGCTCAATTAGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa20320

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000099761	Essential Splice Site	274	826	2	4

Genomic Location (Zv9):

Chromosome 4 (position 61361496)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	76258410
GRCz11	4	77623127

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCCATCACATACGCCCTGGCCATCAACATTGCAGTTCTTTCTTGTTTGAG[G/C]TACGCAGTATTCAAATAATACTAATCTAAGTACCTAATCTAAGAGTGTGA

Long Flanking Sequence:

GGAACAACCATCGGTGGTGTAGAGACACAGCCAAACAGCTCAATGCTGAAAAGTGCCAAAGCGATCAGACTTTATTACTTCCTAGATGAGAAGAAGAGCAAGGGAAACGCAGACTGGCTTGAAGGCTTTATAGAGTTCTTCTCTAATTACACAGACCAGGAAAAGGTGAGTGAAGATGATCGAGAGGTCCTTCAGCATGGCCTAACACACACACAAACAATCTCCAATCACTGTAACCCATTCCTTAAAGACATCTGAAGAAAACACAGATACATTTGCTCGATGTTTCTCTGCTGGTGTCGTGACCTGTGCTAATCTGCCATGATCATGTCTTCACTGCAGCTCATTAATGTGTGTGTTGGATCTCCACAGGTCAGTGTGTCTTACTTCACGTCAGTGTCAAGACAGAATGAGTTTGAGGGCAATACAGACTCCGTGATCCCTCTGTTCTCCATCACATACGCCCTGGCCATCAACATTGCAGTTCTTTCTTGTTTGAG[G/C]TACGCAGTATTCAAATAATACTAATCTAAGTACCTAATCTAAGAGTGTGAGACAGGCTCAATTAGACAGGTGTGTATCCACAGGTTAGACTGTGTCCGGACGAAGGTGTGGGTGGCGTTACTCGGCGTGGTGTCTGCTGGTATGGCCGTGTTGGCGAGCTTCGGTCTGCTGTTGTTCTGTGGGATGCCGTTCGCCATGACCGTGGGCTCGGCACCCTTTCTGATTCTGGGTAAACTTAATTAATGTCATCATCTCCCGGTGCGTCTCTCAGCTGGTGTTCACTAGCTCTGCTTTCCTCCAGGTGTCGGCGTTGACGACATGTTCATAATGATCTCCAGCTGGCAAAAGACTTCGGTTGATATAGGCGTGGAGTTCCGCTTAGCAGAAGCGTATAAAGAGGCTGGCGTGTCCATCACCATCACCACGCTGACGGATGTGCTGGCCTTCTACATCGGGCTGCTGACGCCCTTCCGCTCGGTGCAGTCGTTCTGCATGTACAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa17796

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000099761	Nonsense	463	826	4	4

Genomic Location (Zv9):

Chromosome 4 (position 61360773)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	76259133
GRCz11	4	77622404

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ACAAACAAGGAGCATGAAATGCCAATGGAAGTRTTCTTYAAGAAATATTA[T/A]GGCCCATTTCTGGCAAAGGTRYGGGTCAAGGTGCTYGTGTGTCTGATCTA

Long Flanking Sequence:

ATTCTGGGTAAACTTAATTAATGTCATCATCTCCCGGTGCGTCTCTCAGCTGGTGTTCACTAGCTCTGCTTTCCTCCAGGTGTCGGCGTTGACGACATGTTCATAATGATCTCCAGCTGGCAAAAGACTTCGGTTGATATAGGCGTGGAGTTCCGCTTAGCAGAAGCGTATAAAGAGGCTGGCGTGTCCATCACCATCACCACGCTGACGGATGTGCTGGCCTTCTACATCGGGCTGCTGACGCCCTTCCGCTCGGTGCAGTCGTTCTGCATGTACACCAGCACCGCTCTGCTCTTCTGCTACCTCTTCAACATCACCTTCTTCGGCGCGTGTCTCGCCCTGAACGGACGGAGAGAGAAAAGCAACAGACACTTTCTGACATGCATGACGGTCCCAAAACCCAGTGGCGATGCTGTAAGTTGTTGTGCTGGTGGGGCTTTTGATGAAAACACAAACAAGGAGCATGAAATGCCAATGGAAGTGTTCTTTAAGAAATATTA[T/A]GGCCCATTTCTGGCAAAGGTGTGGGTCAAGGTGCTCGTGTGTCTGATCTACGCCGGATATTTAGCTGTCAGTATCTACGGATGCTTCCAAATGGAGGAAGGTCTAGACCTGAAGCATTTAGCAACAGACGGCTCGTATGTTGCAGATTACTATGACAGAGAGGATGAGTTCTTCTCTGCGTTTGGTCCGAATGTCATGTTAGTCATCAAAGATGAACATTTTCAGTACTGGAGCCCTGATGCTCGTAAAAGTCTTGACTTGTGTTTGAAAAACTTTGGAGATCTAACAATGGTAGATTCAGAGATTCCACTTACTTCTTGGCTTGATGCATACATGCAGTTTGGTCAGAGTGCTGGTTTTGATTTAAACAATGAAATGATATTCAAAACTCAATTACCCGCATTTCTTAACCGCTCAGAGTTTAGCCACGATGTTCATTTCACCGATAATAATATCAATGCAACACGCATGTTCATTCAAACGGTGAACATCAAGACAGC

Associated Phenotype:

Not determined