ZMP
SHROOM3 (2 of 2)
Ensembl ID:
Description:
shroom family member 3 [Source:HGNC Symbol;Acc:30422]
Human Orthologue:
SHROOM3
Human Description:
shroom family member 3 [Source:HGNC Symbol;Acc:30422]
Mouse Orthologue:
Shroom3
Mouse Description:
shroom family member 3 Gene [Source:MGI Symbol;Acc:MGI:1351655]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36528 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa17759 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36528
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109205 | Nonsense | 345 | 1577 | 5 | 9 |
Genomic Location (Zv9):
Chromosome 17 (position 49964078)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 5654011 |
| GRCz11 | 21 | 5760928 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCAGCAGTAGTAGTGAAAGCAGTGGGAGTAGTGGAAGCACTTCCAGCT[C/A]ACAACGGCAGAGTTTTGGGCCAGTCTGGGATCCAATGCACAGCCGGCACT
Long Flanking Sequence:
TTTTCCCTGCAGTGCTTCCACCACAGACCTATCAGGATTTGAGACGGGATTTCTTAGGAAGAGCCCTGATCAGTATAGTTCCCGGGGCAGCATGGAAAGCCTTGACCACAGTCACCCAGCTTACAGCTCCTGCTATCATCTATCATCCTCGAAATCATCCAGCAGCATCGATCATCTACACAACAAGCGGGATTCTGCATACAGCTCGTTCTCCACCAGCTCCAGTATCCCAGAGTACCTTGCAGCCACACCATCATTTAACAAGGAAAGGTCCTATTCCATGGAGAATGTTCCACAGAGGGAAGGGATGCAGCAGGCGGATATACGCTACGTACGCACTGTGTATGACAACCAACAGGGGGTGTCTGAGGAGCACGAGATCACCTCTGCAGCTCTAATGAGAACCAATGACAGCAGAGCACGGTCTAAAAGTGGCATAATCTGTCATCGTGGCAGCAGTAGTAGTGAAAGCAGTGGGAGTAGTGGAAGCACTTCCAGCT[C/A]ACAACGGCAGAGTTTTGGGCCAGTCTGGGATCCAATGCACAGCCGGCACTCCTTTGAGAACCTAAAGGGGGCACCAGCTCCCCCATTACGCAGTGACAGCTATGCAGCATTTCGCAATCACGAACGTCCAAACTCTTGGTCGAGTCTTGAACATGCTCGGTCACAAAGGGCACTTTCAAAGGGTTTCTGGCAACACTCTAGTGGTTCTGTGGCAACAGGAAAGTCCTCATTTGGAGCTGAAGGTCAGTTGCATACAGTGATTGAAAAAAGTCCTGAAAGTAGCCCCACAACCAAACCCAAGCAAGGCATTCCTCAGCCCGCACAACCTGGCCGCTTCATGTTACCAACTGGCGTCTACCCTGTTCCTCCTCCAGAGCCTCATTTTGCACAAATCCCAACCAGCAACCCTAATTCTGGTAGTGTATACCCAGCACTGGCCAAGGAGAGCAAGCACAACAATCACTGTGACCGCTTGGGTGGACTTGTAAAAGAGGACAGGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17759
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109205 | Nonsense | 809 | 1577 | 5 | 9 |
Genomic Location (Zv9):
Chromosome 17 (position 49965469)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 5655402 |
| GRCz11 | 21 | 5762319 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TMCAATATCACCAGCAACAAGACCCTACAGTCACTCAGAAGAAGTATCTT[C/T]AAAGGAGTAAGAGCACCTTTCAGCTTGGTGAGGGTAATGGTAAAGGAGAT
Long Flanking Sequence:
GAAATGACAACATAGTCAAACCTTCAATGCACTACAGTGACTCTAGTGCTCTCCGGCAGAGAGGTCAAGACTTGGATAACCCCCTGACCAGACTGGAGAATGCACTTGCAGAGGTTCAGCGATGTGTAAGTCCTGAAAGTACAACCAGCCATTGCAGTTTTCAGAGTGAGCGTAGCATGTCAGTCCTGGAGAAAGTCAGTCATTTTGAGAGACAGCAAGTCAAACCTCGCAGTCAGAGCAGCCTGTCCCATTATGGATCCACACCTCGGCTGAACCAACCAGCGAGACCCTCCAGTGCCAAGGGTTCCTTTTCTGGTAAGGACGGTGTGCGCACCATGTTGGAGAGAAGCAACAGCTCAGTTACTGAGAGTTACCAGAGAACTGAGAGCTATGATGGACATGCTGATATGCAGCAGGATTTCCATACAAGACGTGGGAGTAGTGATCAAATACAATATCACCAGCAACAAGACCCTACAGTCACTCAGAAGAAGTATCTT[C/T]AAAGGAGTAAGAGCACCTTTCAGCTTGGTGAGGGTAATGGTAAAGGAGATATTCATGACATGTTGGGTGCTATTCAAGACACATCTTTTAACAGAGCATACAGAGACAGCCTTAAAGATGCCCAGTCTAAGGTTTTGAGATCAACTTCCTTCAGAAGGCGTGACTTTGGTGTTAACCCTCCACCAGTACCAGCCAAGCACATGTCCCTAGAGCGAAAAGGAACCAATACAAGTCCCAAAGCAGTTACAACATCACCACACACTCCAAAAGAACGCCATGTTGTTCCTGTTGAAGCACAAAACAGAACCACTCCTCCTGAACTCCCCAGTGTCCCAGCTGTTGGACCCCCAGTTTTGCGGATTTGTGGACGCAAACGGTTCACAATGGAGCAAAAGAAACGATCATATTCTGAGCCTGAAAATATGCATGAAGTTGGAGTGACTCAGGAAATCAATCAAGTTGAGAGGAGGGTTCAACAGCAGTTTCTGTCAAGTGAGACA
Associated Phenotype:
Not determined