Busch Lab

ZMP

si:ch211-120p12.4

Ensembl ID:
ENSDARG00000055698
ZFIN ID:
ZDB-GENE-090312-150
Description:
Novel protein similar to vertebrate pecanex-like 3 (Drosophila) (PCNXL3) [Source:UniProtKB/TrEMBL;Ac
Human Orthologue:
PCNXL2
Human Description:
pecanex-like 2 (Drosophila) [Source:HGNC Symbol;Acc:8736]
Mouse Orthologue:
Pcnxl2
Mouse Description:
pecanex-like 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:2445010]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa661 Nonsense F2 line generated Not yet available
sa28106 Nonsense Mutation detected in F1 DNA Not yet available
sa11440 Nonsense Available for shipment Available now
sa5859 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa31929 Essential Splice Site Available for shipment Available now
sa35478 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa42195 Essential Splice Site, Splice Site Mutation detected in F1 DNA Not yet available
sa42196 Essential Splice Site, Splice Site Mutation detected in F1 DNA Not yet available
sa22287 Nonsense Available for shipment Available now
sa17666 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa661
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Nonsense 215 2005 5 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 None None 1437 None 28
Genomic Location (Zv9):
Chromosome 13 (position 23899155)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23544815
GRCz11 13 23675265
KASP Assay ID:
554-0569.1 (used for ordering genotyping assays)
KASP Sequence:
CTGACCAGTCTGCCCCTCTCCTCCAGGGAGAGCAGATTCCTTCAGCCCAC[A/T]GAGACAAAGCTGAGGAAGATCTACCACCTACACCTACCAACGAAGACGAT
Long Flanking Sequence:
TCAACTATGATCAGCAAAGGAAATTGTTTAGACGGCTTTTTTATATAATCGGCTTGATCATTATTGGCTGAATTGATAATTATGAAAAATAACGTAGAATTAGAGTCCTTCTGGTAAAACCCTTGCTGAAGCTTACATCTGCTGTGTAAAAGGTATGCTGGAATAGTTGGTGGTTGATTCCTCTGTGGCGATCTCTGTAATAGAGAATAATCCAAAGGAAAATGAATGACTGAATGATGTATAGTGGAAAAGCCCTGCAAGTCTTTGTGTAAGCAGTATTGGTTAGCATTTTATAGTTAGCATTGTGCATATTTGCAACCCATGTGTCAATCAGTTTAAACAAGCATAATGTTGTTTTTCCAGGTCAGAGTGATGTCATCTGTAATGACCGATCTAGACCAGAGGCGGAGGAGCAACTCACCCCAGACGATGATGTGTTCAGTCCTAACACTGACCAGTCTGCCCCTCTCCTCCAGGGAGAGCAGATTCCTTCAGCCCAC[A/T]GAGACAAAGCTGAGGAAGATCTACCACCTACACCTACCAACGAAGACGATAAACCCCCAACTGACCCCAACAACAACAATACCTCTCTAGAAATCGCAGAGAACAGAGAAAGACCCGAGGAAAATTACTGTTCGGATGAAATCGCAGTGGTTCTAGTTGACAACTCAAGTCCCTCGGTCAACCTGGATGAAAGCGATACAGTGAAGATCATCATCACAATGAGCTGTGACCCACAGACTGCAGCTGAGCTGGAGGAGTCTGTCAAACAGAGCATCTTACAGTCAGCCCAATCCCACCAGGGAGATTCAGACTGTCCTGTCAAAATTCCTGTCATCACTTTTGACTCCCCTCACGAAGCAGAGGAACCCACTGCAGAAGACGATGAGAAAGATGACACGCCAATCGGAGGAGACAACTCAGTTCAGGAGAAGTCTGAGCGTCAAGACAGTCTTCTTGCCAAAGAGCCCATCAGTTCCGACTCGGCTCAAGAATGTAAAGAA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa28106
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Nonsense 314 2005 5 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 None None 1437 None 28
Genomic Location (Zv9):
Chromosome 13 (position 23899452)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23545112
GRCz11 13 23675562
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGGAGGAGTCTGTCAAACAGAGCATCTTACAGTCAGCCCAATCCCAC[C/T]AGGGAGATTCAGACTGTCCTGTCAAAATTCCTGTCATCACTTTTGACTCC
Long Flanking Sequence:
TAGCATTGTGCATATTTGCAACCCATGTGTCAATCAGTTTAAACAAGCATAATGTTGTTTTTCCAGGTCAGAGTGATGTCATCTGTAATGACCGATCTAGACCAGAGGCGGAGGAGCAACTCACCCCAGACGATGATGTGTTCAGTCCTAACACTGACCAGTCTGCCCCTCTCCTCCAGGGAGAGCAGATTCCTTCAGCCCACAGAGACAAAGCTGAGGAAGATCTACCACCTACACCTACCAACGAAGACGATAAACCCCCAACTGACCCCAACAACAACAATACCTCTCTAGAAATCGCAGAGAACAGAGAAAGACCCGAGGAAAATTACTGTTCGGATGAAATCGCAGTGGTTCTAGTTGACAACTCAAGTCCCTCGGTCAACCTGGATGAAAGCGATACAGTGAAGATCATCATCACAATGAGCTGTGACCCACAGACTGCAGCTGAGCTGGAGGAGTCTGTCAAACAGAGCATCTTACAGTCAGCCCAATCCCAC[C/T]AGGGAGATTCAGACTGTCCTGTCAAAATTCCTGTCATCACTTTTGACTCCCCTCACGAAGCAGAGGAACCCACTGCAGAAGACGATGAGAAAGATGACACGCCAATCGGAGGAGACAACTCAGTTCAGGAGAAGTCTGAGCGTCAAGACAGTCTTCTTGCCAAAGAGCCCATCAGTTCCGACTCGGCTCAAGAATGTAAAGAAATAGAAAGCAATGAGCAAGAGATGCCCAACATGAGCCCCCTCATGACCAACAACAGCTCTTCAGGCATTGATGTGAACTCCCACCCTGATGAAAGTGACCCACCAGAGCTGAAGTTGGATGCTGACGGATTCTTGCAAATTCCGTCAGCGTACATGAGATGCACTCAGAGCGGAAGGACACATGCGAGGGGACTCAGTATTGATAGTGGAAGAGATGCTGTTCTTATTAGCTACAAAGCAAAAGATAAGCTTGGTACGATGACATCCTCCAAGTCAGACCTTGAAGCCAAGGAGGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11440
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Nonsense 943 2005 16 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Nonsense 372 1437 10 28
Genomic Location (Zv9):
Chromosome 13 (position 23908977)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23554637
GRCz11 13 23685087
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTCCAGCTCTTTTCTCTGGTTTCTGTGCTCTGCTAGTGGTCGTCTCCTA[T/A]CATCTKAGCCGACAAAGCAGTGATCCATCAGTGTTATTGTAAGAACATTG
Long Flanking Sequence:
AAATAATATTTTACTAGATATATTTCATGACACTTCTATAAAGCTTTAAGTTTCATTTAAATACTTAAATGCATTTAGGTGACATTTAAATAGTAGGTTAATTAGGTCAACTAAGCAGGTTAGGGTAATTAGGCAAGTTATTGTATATTGATGGTTTGTTCTGTAGACTATCAAAAAATATAGCTTAAAGGGGCTAATAATTTTGACCTTAAAATGGTTGTTAAAAATTTAAAAACTGGTTTTATTCTGGCTGAAATAAAACAAATAGGAAGTTATCTGGATGAAAAAATATTGTAAAATGTCCTTGCTCTGTTAAACATCATTTGAGAAATATTTTAAAAAGAACAAACTTCAAAGGGGGGCTAATAATTCTGACTTCAACTGTAGATTTTAGATGTGCAATGGCAATATTTGATATCTTGTGTGCAGGAGCCTTGGGATGAACAGCATATTCCAGCTCTTTTCTCTGGTTTCTGTGCTCTGCTAGTGGTCGTCTCCTA[T/A]CATCTTAGCCGACAAAGCAGTGATCCATCAGTGTTATTGTAAGAACATTGTGCCCTTTTCATTGATCATTTAGTTTTGAACATCTGCCACAGATTTAAGCACTAGAAGAGAACTCACACCAATGCTCAGAACCAAATACTGTTTGTAAGCACATTGTTTTTGTCTCAGCTCATTGATTAAGTCCAAGCTGATGCCTTCACTTGGCCATGGTGAGGAAGAAGAAGAGGAATCAGCTGAAAACACAGACCCTCTTCCAGAGAAACTCAGAGGCTCTGTGGTGGGTGCCTTTCATTTATTAGTGGATATTCAGATCCAGCATCTTTTATTTTGCCTGAGCTTTCATCACAAGGATCAGATTTGTTTGTTATGATTAAAAAAATGCATGAGGCTGCATTTACTTGCTAAAAAAATATAAAACATTATTATTGTAGAATATTATAACATTTTCAAATAAACTCTGTTTTTAATTTAACATAGTTAAGATCAAAAGTTGTGTTTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5859
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Essential Splice Site 993 2005 18 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Essential Splice Site 420 1437 12 28
Genomic Location (Zv9):
Chromosome 13 (position 23909935)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23555595
GRCz11 13 23686045
KASP Assay ID:
554-3663.1 (used for ordering genotyping assays)
KASP Sequence:
ATGCATTCYTTTCTAAATTATATTTTAAAATCAATGTATTTTGTTGTTAC[A/G]GAAAGAGATTTTACTGTCAGATCTGGTTGTTTGCAGTCTGGCCTCAGTTT
Long Flanking Sequence:
CTGTTTTTAATTTAACATAGTTAAGATCAAAAGTTGTGTTTTCAGTAGTGTCACATGATTTTTGATGTCATGGTTCTTCAGAAATCATTCAGATTCGCTGATTTAGTACTTAAGAAGCATTTGTTGATGAATGTATGAAAATAGTTCTAAATATGAAAATAGTTTGTTATGGAAACTATCATACATATTTTTCATGATGATCTCCTTGATGAATAAACAGTTCAAAAGAAGACATTTTACTTGAATTATACATTTGTAATATTATTGAAAATATATTTACTGTCAAGTTCATCAATTTAAATGATTAAATTGTGCCTGTTAAATTAAAGTACTAATTTCTTAAATCCAATAAACTATTATGTACCAGACAGCTGAAATAAAGAGCATTTATCTAAAATTTAAATATTTAGTGTAAAATAAGTGTATTTACTGTCACTTCTGATCAATATAATGCATTCTTTTCTAAATTATATTTTAAAATCAATGTATTTTGTTGTTAC[A/G]GAAAGAGATTTTACTGTCAGATCTGGTTGTTTGCAGTCTGGCCTCAGTTTTGACCTTTGCAATTACTGCCAGCACGGTTTTCCTGTCTCTAAGAGTGAGTTTCTCTTACTTGTTACATTTCTTACACACAACCTCTTCATAATCTAAATCAAATCAGAGTTATCATAGAGACATAATATCTACATTATACCTACCTACAGTTGAAACCAGAAGCTTACTTACACTGTATAGAAAGGCACATAACCATTTTTTTTTAAGTCAGATGTTAATGTGACTAAACTTTTTTCTCTTTGAGTTAAGTTTGGAATATCAAATTTGTTTCTGTTATGCTTAATAGCAGAATAATGAGAACAATATATATATATTTTTTTTACATACAATAAGATTATTATGATTCTAAAAAAGCTCAGAAGATGGTGTCAAGGTTTTGTAAGTTTCTGATTGGTTAAATTTGAGTTAATTAGAGGCACAACTGTAGAAGAGTATTTAAGGAAAACCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31929
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Essential Splice Site 1023 2005 18 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Essential Splice Site 450 1437 12 28
Genomic Location (Zv9):
Chromosome 13 (position 23910030)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23555690
GRCz11 13 23686140
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTTTTGACCTTTGCAATTACTGCCAGCACGGTTTTCCTGTCTCTAAGA[G/T]TGAGTTTCTCTTACTTGTTACATTTCTTACACACAACCTCTTCATAATCT
Long Flanking Sequence:
CGCTGATTTAGTACTTAAGAAGCATTTGTTGATGAATGTATGAAAATAGTTCTAAATATGAAAATAGTTTGTTATGGAAACTATCATACATATTTTTCATGATGATCTCCTTGATGAATAAACAGTTCAAAAGAAGACATTTTACTTGAATTATACATTTGTAATATTATTGAAAATATATTTACTGTCAAGTTCATCAATTTAAATGATTAAATTGTGCCTGTTAAATTAAAGTACTAATTTCTTAAATCCAATAAACTATTATGTACCAGACAGCTGAAATAAAGAGCATTTATCTAAAATTTAAATATTTAGTGTAAAATAAGTGTATTTACTGTCACTTCTGATCAATATAATGCATTCTTTTCTAAATTATATTTTAAAATCAATGTATTTTGTTGTTACAGAAAGAGATTTTACTGTCAGATCTGGTTGTTTGCAGTCTGGCCTCAGTTTTGACCTTTGCAATTACTGCCAGCACGGTTTTCCTGTCTCTAAGA[G/T]TGAGTTTCTCTTACTTGTTACATTTCTTACACACAACCTCTTCATAATCTAAATCAAATCAGAGTTATCATAGAGACATAATATCTACATTATACCTACCTACAGTTGAAACCAGAAGCTTACTTACACTGTATAGAAAGGCACATAACCATTTTTTTTTAAGTCAGATGTTAATGTGACTAAACTTTTTTCTCTTTGAGTTAAGTTTGGAATATCAAATTTGTTTCTGTTATGCTTAATAGCAGAATAATGAGAACAATATATATATATTTTTTTTACATACAATAAGATTATTATGATTCTAAAAAAGCTCAGAAGATGGTGTCAAGGTTTTGTAAGTTTCTGATTGGTTAAATTTGAGTTAATTAGAGGCACAACTGTAGAAGAGTATTTAAGGAAAACCTCAAACACACTGCTTCCTTGTGTGACAACATGGGGAAATTAACAAGCCAGAATCAACACAAAAGCCAGATTACAATTTGCTAAATTACACTGGGGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35478
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Essential Splice Site 1023 2005 18 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Essential Splice Site 450 1437 12 28
Genomic Location (Zv9):
Chromosome 13 (position 23910031)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23555691
GRCz11 13 23686141
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTTTGACCTTTGCAATTACTGCCAGCACGGTTTTCCTGTCTCTAAGAG[T/A]GAGTTTCTCTTACTTGTTACATTTCTTACACACAACCTCTTCATAATCTA
Long Flanking Sequence:
GCTGATTTAGTACTTAAGAAGCATTTGTTGATGAATGTATGAAAATAGTTCTAAATATGAAAATAGTTTGTTATGGAAACTATCATACATATTTTTCATGATGATCTCCTTGATGAATAAACAGTTCAAAAGAAGACATTTTACTTGAATTATACATTTGTAATATTATTGAAAATATATTTACTGTCAAGTTCATCAATTTAAATGATTAAATTGTGCCTGTTAAATTAAAGTACTAATTTCTTAAATCCAATAAACTATTATGTACCAGACAGCTGAAATAAAGAGCATTTATCTAAAATTTAAATATTTAGTGTAAAATAAGTGTATTTACTGTCACTTCTGATCAATATAATGCATTCTTTTCTAAATTATATTTTAAAATCAATGTATTTTGTTGTTACAGAAAGAGATTTTACTGTCAGATCTGGTTGTTTGCAGTCTGGCCTCAGTTTTGACCTTTGCAATTACTGCCAGCACGGTTTTCCTGTCTCTAAGAG[T/A]GAGTTTCTCTTACTTGTTACATTTCTTACACACAACCTCTTCATAATCTAAATCAAATCAGAGTTATCATAGAGACATAATATCTACATTATACCTACCTACAGTTGAAACCAGAAGCTTACTTACACTGTATAGAAAGGCACATAACCATTTTTTTTTAAGTCAGATGTTAATGTGACTAAACTTTTTTCTCTTTGAGTTAAGTTTGGAATATCAAATTTGTTTCTGTTATGCTTAATAGCAGAATAATGAGAACAATATATATATATTTTTTTTACATACAATAAGATTATTATGATTCTAAAAAAGCTCAGAAGATGGTGTCAAGGTTTTGTAAGTTTCTGATTGGTTAAATTTGAGTTAATTAGAGGCACAACTGTAGAAGAGTATTTAAGGAAAACCTCAAACACACTGCTTCCTTGTGTGACAACATGGGGAAATTAACAAGCCAGAATCAACACAAAAGCCAGATTACAATTTGCTAAATTACACTGGGGAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42195
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site, Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Essential Splice Site 1217 2005 None 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Splice Site 644 1437 16 28
Genomic Location (Zv9):
Chromosome 13 (position 23919058)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23564718
GRCz11 13 23695168
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATGGGGTAGTGCATTTCATGCATTTGCACAACCCTTTGCTGTACCTCA[T/C]ATCCTTTACAATATGTCCAGCTTCAGTGTTTTTATTGGCGGCATAGACTT
Long Flanking Sequence:
CCGTCAGTGGGATTGCAGTGTACTATTCTTCTCTTCCAAATGTCTTTGGTATTTAAATGTTTCTGTCATAGTCTAACCTGGAAAGACAAACTGCTTGTCGCAGAAATCTTGTCATGTCTTGTGTTGTTTGGAGAGTTTGTTAGCAAATCACAGATTCTCAATTTTGTTCCATTTTACAAAATGCCCCAACTTTTTTGAGAATGTGGTTGTACATTTCGAATATCGGATAACAAAACAACAATACAGTTCTCATTAATACCAGACTGTTGTCGAAAATAGCTCTCAGACACACAGTGCATTTAATAGCTAGTCCCAAAATAGCTCTGTGAATGTGTGTGTTGGTGTGTGTGCTTTTGTGGCTCTGACAGCATCTCTTTGTTTGCTCTGCAGCTTTGGGATCTCCTCCACAAGCTGCACTTCATTCTAGTTTACATCGCCCCCTGGCAGATCGCATGGGGTAGTGCATTTCATGCATTTGCACAACCCTTTGCTGTACCTCA[T/C]ATCCTTTACAATATGTCCAGCTTCAGTGTTTTTATTGGCGGCATAGACTTAAAGGGGTTAACTCTTAAAGCTCTAATGTAATATGGTTAAATGTACCTCCAGATGTTTTGCATATATTTGTTCTTGACGGATGATCTCAGACTCTGCCATGCTGCTGCTGCAGACGTTCATCACCACGCTCTTCTACACGCCGCTCAGCCCTTTCCTTGGCAGTGCCATCTTTATCACCTCATATCCACGGCCTGTAAAGTACTGGGAGAGAAACTATAAGTGAGTTGCATGTTATTTACACTTGCATTTTGTAAAAAGTGAAGAAAAAAAAAAACGTGTTACTGCTAATAGAATTCATTGTTTCAACTTAATTTTGCTTTTTAAAAAAGACAAATTAGGACATGTAGAGAAAGAAAAGAAAAGAAGAAGTACAAAATAGGAGAAAATTGTTCAGCTACATACTGTACAGCAGTTATAATAAACAAGAGAAAACAAAACACAAATTGATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42196
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Essential Splice Site, Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Splice Site 1217 2005 23 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Essential Splice Site 645 1437 17 28
Genomic Location (Zv9):
Chromosome 13 (position 23919200)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23564860
GRCz11 13 23695310
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTACCTCCAGATGTTTTGCATATATTTGTTCTTGACGGATGATCTCAGA[C/T]TCTGCCATGCTGCTGCTGCAGACGTTCATCACCACGCTCTTCTACACGCC
Long Flanking Sequence:
GCAAATCACAGATTCTCAATTTTGTTCCATTTTACAAAATGCCCCAACTTTTTTGAGAATGTGGTTGTACATTTCGAATATCGGATAACAAAACAACAATACAGTTCTCATTAATACCAGACTGTTGTCGAAAATAGCTCTCAGACACACAGTGCATTTAATAGCTAGTCCCAAAATAGCTCTGTGAATGTGTGTGTTGGTGTGTGTGCTTTTGTGGCTCTGACAGCATCTCTTTGTTTGCTCTGCAGCTTTGGGATCTCCTCCACAAGCTGCACTTCATTCTAGTTTACATCGCCCCCTGGCAGATCGCATGGGGTAGTGCATTTCATGCATTTGCACAACCCTTTGCTGTACCTCATATCCTTTACAATATGTCCAGCTTCAGTGTTTTTATTGGCGGCATAGACTTAAAGGGGTTAACTCTTAAAGCTCTAATGTAATATGGTTAAATGTACCTCCAGATGTTTTGCATATATTTGTTCTTGACGGATGATCTCAGA[C/T]TCTGCCATGCTGCTGCTGCAGACGTTCATCACCACGCTCTTCTACACGCCGCTCAGCCCTTTCCTTGGCAGTGCCATCTTTATCACCTCATATCCACGGCCTGTAAAGTACTGGGAGAGAAACTATAAGTGAGTTGCATGTTATTTACACTTGCATTTTGTAAAAAGTGAAGAAAAAAAAAAACGTGTTACTGCTAATAGAATTCATTGTTTCAACTTAATTTTGCTTTTTAAAAAAGACAAATTAGGACATGTAGAGAAAGAAAAGAAAAGAAGAAGTACAAAATAGGAGAAAATTGTTCAGCTACATACTGTACAGCAGTTATAATAAACAAGAGAAAACAAAACACAAATTGATATTAAATGTATATGCATTATTTAAAACATTTTTACCATGGTTTGACTTTGGAAAAAATTAAGTATAGAAGGAATACTGTAAATATCATTTTAAAAGGAATAACAACAATAATATGGGAGTAAATTTTAGTGTGTTAGTGGGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22287
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Nonsense 1537 2005 28 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Nonsense 964 1437 22 28
Genomic Location (Zv9):
Chromosome 13 (position 23928705)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23574365
GRCz11 13 23704815
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGATTCTCCCCTGGTTACTCTGTGTTTCGCTCTGTCTGTGCTTGGCCGC[A/T]GATCCCTCAGTACAGCAGCACACAACAGATCCAACAGGTACAACATTCAA
Long Flanking Sequence:
AATGGCAAGGTTTTGCATTCAGATGACAATGATTTCAAAATGACACCCAAAATCACATGGATCCACAAAAACAACTATGCTATAATATGCATGCTAGGCCAATAGTTGGTGACTTTATTCAGCACAAACACTTTCCTTAATACCACAATAATTGTTTTGATTGTCAAACAGTTACACAAGACTGTAAACTAAATGTATGATGGCACTTATTTCCACAAATCTTAATTAAAAATTTTAAAGTTTAAAGATTTTATTCGAAAATAAGTAAAAAAAAAAAAATCTTTAAAATGGTATTGAAATGTAAATCAATGGGTTTCAAAGCTTTTCAAAGTTTCATTTTTTTGTGAACTAATCCTTTAAATTTAAAATTTAAAACCCCCGCAGATACAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTGTCCTCAGCCAGTGGACAGTGATGAAGATTCTCCCCTGGTTACTCTGTGTTTCGCTCTGTCTGTGCTTGGCCGC[A/T]GATCCCTCAGTACAGCAGCACACAACAGATCCAACAGGTACAACATTCAAAATCAGCCATAAGTAATATGACTCAACAGTTAAATCATGTAAAGACAACATAATAAAGAACAGCTAGTTTGAAAGATTCCAGTCAGAATCAATGATACTGTATTGATAATGTATAATGCATTAGATAATGTATATTTTTACCGGTCTCCTCTACAGTCTGGAGTCCTTCCTCTATGGCTTCAACACACTGTTTAAAGGAGATTTCCGCATCGCTGCTAAGGATGAATGGGTCTTTGCTGACATGGACCTTCTGCAGATGGTTGTGGCCCCAGCCGTGAGAATGAGTCTGAAACTTCACCAGGTGAGATGAACACTCTCCTTTTCTTTTCGGCTTAGTCCCTTTAATAATCTTGGGTCGCCACCGCGGAATGAACCGGCAACTTATCCAGCAAGTTTTTAGGCAGCGGATGCCCTTCCAGCTGCAACCCATCTCTGGGAAACACTCATAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17666
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078079 Essential Splice Site 1597 2005 29 34
ENSDART00000134973 None None 203 None 5
ENSDART00000144215 Essential Splice Site 1024 1437 23 28
Genomic Location (Zv9):
Chromosome 13 (position 23929058)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23574718
GRCz11 13 23705168
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGATGGTTGTGGCCCCAGCCGTGAGAATGAGTCTGAAACTTCACCAGG[T/C]GAGATGAACACTCTCCTTTTSTTTTCRGCTTAGWCCCTTTAATAATCTKG
Long Flanking Sequence:
CCTTTAAATTTAAAATTTAAAACCCCCGCAGATACAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTGTCCTCAGCCAGTGGACAGTGATGAAGATTCTCCCCTGGTTACTCTGTGTTTCGCTCTGTCTGTGCTTGGCCGCAGATCCCTCAGTACAGCAGCACACAACAGATCCAACAGGTACAACATTCAAAATCAGCCATAAGTAATATGACTCAACAGTTAAATCATGTAAAGACAACATAATAAAGAACAGCTAGTTTGAAAGATTCCAGTCAGAATCAATGATACTGTATTGATAATGTATAATGCATTAGATAATGTATATTTTTACCGGTCTCCTCTACAGTCTGGAGTCCTTCCTCTATGGCTTCAACACACTGTTTAAAGGAGATTTCCGCATCGCTGCTAAGGATGAATGGGTCTTTGCTGACATGGACCTTCTGCAGATGGTTGTGGCCCCAGCCGTGAGAATGAGTCTGAAACTTCACCAGG[T/C]GAGATGAACACTCTCCTTTTCTTTTCGGCTTAGTCCCTTTAATAATCTTGGGTCGCCACCGCGGAATGAACCGGCAACTTATCCAGCAAGTTTTTAGGCAGCGGATGCCCTTCCAGCTGCAACCCATCTCTGGGAAACACTCATAGACATTCACACTCATACACTACGAACAATATAGCCTACCCAATTCACCTGTACCGCATGTCTTTGGACTGTGCGGGAAACCGGAGCACCCGGAGTAAATCCCACACGAACGCAGGGAGAACATGCAAACTCTACACAGAAACCCCAACTAAGCCGAGGCTCGAACCAGCTACCCAGTAACCTTCTTGCTGTAAGGTAACAGCACTACCTACTGCGCCACTGCTTCGCCCTAATTGGTACATATTAAACATTTTTAATATTATTAAAGTCTCCATGAAGGGAAACCTGCAATCGTTATTTGTGTTTGTATTGTGATCCAGTCACCAAACGGAATATTAAATGAAAAAACAGTGGGC
Associated Phenotype:
Not determined