ZMP
ddx6
Ensembl ID:
ZFIN ID:
Human Orthologue:
DDX6
Human Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:HGNC Symbol;Acc:2747]
Mouse Orthologue:
Ddx6
Mouse Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 Gene [Source:MGI Symbol;Acc:MGI:104976]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23370 | Essential Splice Site | Available for shipment | Available now |
sa36717 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa16927 | Nonsense | Available for shipment | Available now |
sa17615 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23370
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087382 | Essential Splice Site | 89 | 485 | 2 | 12 |
Genomic Location (Zv9):
Chromosome 18 (position 42280411)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 43885783 |
GRCz11 | 18 | 43879237 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAGAAGAATCTAAAGCTTCCTCCAAAAGATTTGCGAATGAAAACATCAG[T/C]AAGTCCCTCTGTAATTTTGTGTTTTTTATTTAATTTTATAAAGGCTGTGA
Long Flanking Sequence:
TTTTTTTTTTTGCTTTTGTGCGCTTTGGACACTGAGAAAGCTGTGGGAAGGACGACTTGCAAATTAATTTTTTTGCAAGACCATCAAGAGAAAGTATTATCTCCACTGTTGTTTGTCGCTCACTGTTTCAAGAGAGAATATTTAAGTCATGAGTACAGCCAGAATGGAGAACCCAGTGATTCTGGGACTGTCCAATCAGAACGGCCAAATGCGAGGTTCTGTGAAGCCAGCAGGGGGTCCCGGTGGAGGTGGAGGGGGGTCCCAAACAACACAGCCTGCCCAGGTCAAAGCCTCTAGCACAGTCAACAATGGCAACTCCCAGCCTGTACCCACAGCCAACACTATCATCAAGTAAGTCCTTGCAAATGCCGCTGTGTGCTGCTTTCTTAGAGATGATTTGGTATTTAACTTTTTCTTTCCCTTCCCATGTATCAGGCCTGGAGATGACTGGAAGAAGAATCTAAAGCTTCCTCCAAAAGATTTGCGAATGAAAACATCAG[T/C]AAGTCCCTCTGTAATTTTGTGTTTTTTATTTAATTTTATAAAGGCTGTGAACCACAATGCTTTTTTGATTTCTTTAACATTTCTAGAACACTCAATGATTGTGAATTTTGCAGGATGTGACGGCGACCAAGGGAAATGAGTTTGAAGATTATTGCCTAAAACGAGAGCTGCTTATGGGCATCTTTGAAATGGGCTGGGAGAAACCATCACCTATACAGGCAAGAGGCAAAATAAAGACACTGGAAATTTTAGATATGAATTACTATTATTTGAAGAGGGCAGTCTTGATCTTAAAGAGTCTTAACACTTATACCATGTGTAGAGCCTAGTTACTTTTTCATCAATGCAGTCCTAATATTTAAATGTAATTTTAATTTGTAACATTAAATCTATTAAAATAATCAGTTTTAATCAAGTTCTGATTTATTTTTACTTTTTTAGATTGTCTTAATTTAAATCAAATCATGTGCAAATTTAGTTTTTTTTATTTTTAAGTTGTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36717
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087382 | Nonsense | 229 | 485 | 6 | 12 |
Genomic Location (Zv9):
Chromosome 18 (position 42277974)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 43883346 |
GRCz11 | 18 | 43876800 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTATTCTATTTGTAGTGCACGTCGTCATCGCCACTCCAGGAAGAATTT[T/A]AGACCTCATCAAAAAGGGAGTGGCCAAAGTGGGTCAAGTGCAGATGATCG
Long Flanking Sequence:
TGCGTTGTCTGGGAGGGACATTCTGGCCCGAGCCAAGAACGGCACAGGAAAAAGTGGCGCCTACCTCATTCCCTTACTTGAACGCATAGACCTGAAGAAAGACAGCATACAAGGTCAGTGGGAAGATCTTGCATTTGGCACATTTGCATGTTCATGGGCTTCATTAGCTTTTATATGAGAGTTCTCTACTGGTTGTAAGTGACCTCATCCTTTCTTTGTTTTTGTTTTTTTCGCAGCGGTGGTCATTGTGCCCACTAGAGAACTGGCTCTTCAAGTGAGCCAGATCTGTATCCAGGTCAGCAAACACATGGGCGGGGTCAAGGTCATGGCAACTACAGGTGGAACCAACCTTCGTGATGACATCATGAGACTTGACGAAACTGGTAGGTGATTGTTTAATTAGTGGCACTGGTTTTTAAATGATTTGACGTTCTGTTTGAATTGCTCTTATTGTATTCTATTTGTAGTGCACGTCGTCATCGCCACTCCAGGAAGAATTT[T/A]AGACCTCATCAAAAAGGGAGTGGCCAAAGTGGGTCAAGTGCAGATGATCGTGTTGGATGAGGTGTGTAAATATGAGATTTATTTTGTGCTTATGCTAATAGCTGAAAGTAATTCTCACATCTCATGGATGTTTTGCCCTTCTATCCGAGTAGGCAGATAAGCTCTTGTCGCAGGATTTTGTACAGATGATGGAGGAGATTCTGAGCTCTTTGTCTAAACAAAGGCAAATTTTGCTGTACTCTGCCACATTCCCACTGAGTGTGCAAAAGTTCATGGTAAGCTTACTTAAGATATCTATTGTTTTTTGCATAACATTTTTCACTTATGTCTTAAGCAAACGTAGATGAACAAAATGCAAAAAATTATACATTTTTTTTTCAATCAAATTCACTTTAATGCATTCATTTAATTTATCGAACAGTTCATTTATTTTAAAGTAAATGTTAATTTAGTAACTTCACTTCATGCATAGTTGTACCTTGAGGTTTATTTTTTATTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16927
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087382 | Nonsense | 315 | 485 | 8 | 12 |
Genomic Location (Zv9):
Chromosome 18 (position 42275006)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 43880378 |
GRCz11 | 18 | 43873832 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGATAAACCTGAWGGAGGAGCTGACCCTGAAGGGGGTTACTCAGTATTA[T/A]GCCTATGTGACTGAAAGGCAGAAAGTCCATTGCCTTAATACTCTATTCTC
Long Flanking Sequence:
GGACAAGCATGGATGGTTTAAGCGGCAGCTCTAGCGATGAAGAAATTATTATTATTCACAAGAGCAGTAAGAAGCTAAACTTTCATATCACCTCTGGGCATCTTCTTTAATGTGCTTCCTATTGACAGTTTTGCGCTTGAGCGCCTCCAAGTGCTGTTTACTGTAACTTCAGCAGCTCCGTGCACATGAGCAAAAGTGCCAATCTGATTGGTAAAGAAGGTTTTGACGCAGCGCTTTCACATCCTGAATAAAAAAAAATAAAATAAAAAAATACTTGTCAATCTGTAATTAAAATAACATGTTGCTTTAGTTTTGTTACACAACACACTTTTTTTTCATTCTTTTGGCCATAAAGAAATGTTGCATGTAATTGTACCATCATTAGATTTCAGAAGTGATTAATGCACCCTTTGTTTTTGTGAACAGAACTCCCATCTCCAGAAGCCCTATGAGATAAACCTGATGGAGGAGCTGACCCTGAAGGGGGTTACTCAGTATTA[T/A]GCCTATGTGACTGAAAGGCAGAAAGTCCATTGCCTTAATACTCTATTCTCTAGGGTAAAAGCACTTTGCATTCTCATCTGATCCATTACTACTGACCATTTAAGAACAGGCAGATCTGATCTTTTTAATGTTTTCGCTTCAGCTCCAAATCAATCAGTCTATAATCTTCTGCAATTCGTCCCAGCGAGTGGAACTCCTGGCTAAAAAGATCTCACAGCTTGGGTACTCCTGTTTCTACATTCATGCCAAGATGAGGCAGGTGCGTATAAAGAGGGCATGTGGTGTGACTGCACTGCTGTTGGCACAATTCTGAAACGGAGCAAGTGTTTGTGATTTCTGAAATGTGTATGGAATTTCAAATGATTTGGGGCTTTTGTGTCTTGTGATTTTTGCCAACATGTTTCTATTTATTTAAATTTTTTAGGAACACAGAAACCGCGTGTTCCATGATTTCAGAAACGGCTTATGTCGAAATCTCGTCTGCACTGGTAAGGACCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17615
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087382 | Nonsense | 429 | 485 | 12 | 12 |
Genomic Location (Zv9):
Chromosome 18 (position 42272236)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 43877608 |
GRCz11 | 18 | 43871062 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGAAGAAGAATCTGTGTAAATGATAATTGCCTTTTTGTCCTTCTCAGGC[C/T]GATTTGGACACTTGGGTCTTGCCATTAACTTGATCACTTAYGATGACCGC
Long Flanking Sequence:
TTCCACTAATTTTCCATATCGAATATTATCCCAACAGTGACTGAAGCCACAAAAAATAAATTATGGCACATTTTTGGTAGCTGAAGATTCGGTACTTCTCTAATGTCCACTTTTTTTTTTTTTTTTTTAGATTACTGTTGTTGCACATTTCTGCTTGGCTCTTAGTTTGCTAAAGAGTAAAACTTCCAGATTTTATCATTGTTTATCACAAACTTTATCACAATTCGATATCATTCATCAGCCAAGCCCTAATCTCCGTTGAATACTTTTCTGAAAGTGATGTATAGAGTGAGAAGGTAATTGGTGTCAACCAATCCAAACACAAAATGAAAACGTATCATAAATGACCGCCTGGTTGTATTAATAAACACTAATGTTAATATGAGATGTCAACTGGACCTGAGAACTTAAGTTCACATCTTATATCTTGCTGTTTGACTGGCTAGGTTTTTGAAGAAGAATCTGTGTAAATGATAATTGCCTTTTTGTCCTTCTCAGGC[C/T]GATTTGGACACTTGGGTCTTGCCATTAACTTGATCACTTATGATGACCGCTTTAACCTGAAAGGTATTGAAGAACAGCTGGGTACTGAAATCAAGCCCATTCCCAGCAGTATTGACAAGAGTCTATATGTGGCCGAGTACCACAGTGAGAGCGGAGAGGAGGTTAAACTGTGAGCAGGAGAGGTGAGTTCAGAGCTAGGATGAGTCAGCATTTGTCATGCATACATGTTTGATATTAACTTCTTTTTTTTTTTTTCTCCCCCCCCACTCCTTCCAGATCACCAATCCTTTGTCCCCTATCCCACCCTTTTCGTTCCCTACTGTGTCTAGGGAATAGGGGACTTTTTTTTTCTTTTTTTTCCCCCCTCCTTTCAACTATATCTTATTTCTGTCTTCCTCTACTCCCACCTCCCTCTTTTTTTCGTTTTCTTTTTTTCTCTCCTGTCTTGTGCCACCACAAGGAATGTCGTGTCGATGGCCCAATATTCGGGAAGGACTCAT
Associated Phenotype:
Not determined