ZMP
trio
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to human triple functional domain protein TRIO (PTPRF interacting) [Source:Uni
Human Orthologue:
TRIO
Human Description:
triple functional domain (PTPRF interacting) [Source:HGNC Symbol;Acc:12303]
Mouse Orthologue:
Trio
Mouse Description:
triple functional domain (PTPRF interacting) Gene [Source:MGI Symbol;Acc:MGI:1927230]
Alleles
There are 14 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa22758 | Nonsense | Available for shipment | Available now |
sa42663 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39081 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa31000 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa17346 | Nonsense | Available for shipment | Available now |
sa10735 | Essential Splice Site | Available for shipment | Available now |
sa28584 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa36045 | Nonsense | Available for shipment | Available now |
sa12241 | Essential Splice Site | Available for shipment | Available now |
sa22757 | Essential Splice Site | Available for shipment | Available now |
sa6408 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa42662 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa22758
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 363 | 2996 | 6 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10215353)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8998599 |
GRCz11 | 16 | 8890935 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCAGTCGGATTATGTCAGTGGGGAACAGGCTGCTGGAGTCAGGTCACTA[T/A]GCGACCCAGCAGATTCAGCAGATCTCAGGTCAGCTGGAGCAAGAGTGGAA
Long Flanking Sequence:
GATTCGATCTCCTTATCGGAAATCGGACCCGATCACACGGTTTCAGACTCGATCGGAATCAGACGTTACCTCCAGATCAGGACTCTAATCGTGCTATCTATTTTTATATTAGATTTTTTTTTTAGCACTAAAATCCAAAAGTGAAGAATTTGTTATTTATTACTTGATTGTTCAAGCTACCTCACAGAACTGTTCTGTTTATTAACAGAGTTGTTGAATGTTAAAATAAGGTGAATTAAATAAAAAAAATAAGGAACATCCTGGATCTGTTTCTTCACTCTTTTTTTAAATTATTGTTTTCATGTATTATAGATGTCTCAGATCGGGTTTCAGGATTGGTAGATTCTCAAAATCAAATGATTCCGACTCGAGGGCAAAAAAACCTGATCGAGACATCCCTAGTAAATACATACCTTTGTTTTTGGTGTCTTGCAGAATGTGTACGTGAACATCAGTCGGATTATGTCAGTGGGGAACAGGCTGCTGGAGTCAGGTCACTA[T/A]GCGACCCAGCAGATTCAGCAGATCTCAGGTCAGCTGGAGCAAGAGTGGAAAGCATTCGCCGCTGCACTGGACGAGAGAAGTACACTGTTGGAAATGTCTGCCAACTTCCACCAGAAAACTGACCAGGTGAGGCTCATGTGTTACCATATCTTCTGATACACTGGATGAACAAACAAACAAATGGATAATGTCTTTCAAATGATTAATTATGAGAGTTATGAGATAAAAATCTATAAAATTAAAGCTGTGGTGAAAAGATAAGAGATAAATTCTCAGGTTGATTTACTGGATGTTTTAGGTATGGTTTTGAGTAAAATTATATTTATTCTATATAGGTGTGATAATAGCTTTCAAATTAGAAATAATTGTGTTAATTTGACTTGTTTCTATGGTTTATAAGGACACAAATTTGTGTAATGACATGGGTATTGCCTAGTTCAGGGGTGCTCAACCCTGTTCCTGGAGATCTACTTTCCTGTAGATTTCAGTTGCTACCCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42663
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 499 | 2996 | 8 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10210502)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8993748 |
GRCz11 | 16 | 8886084 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTTCATCACGTTCTGGATATCATTCATGAGGTTCTGCATCACCAGAGG[C/T]AGTTGGAGAACATCTGGCAACACCGCAAACTCCGTCTCCACCAACGGCTG
Long Flanking Sequence:
TTTTGGCAAATAAAATCACGATTCACATTTTAGCCAGAATCGTGCAGCCCTAATATGGTGTCATGACTTTGCATTAAAAACACTTCATTATAATGGTAGTCAATGAGGCAAGAACGGCCACCAATATAATGAAAGGGTTGCAAATTTGAGTGTAATGTTGAGTTTTCTTTCAAAGCATTTTCCCAAAATATATGTCAAAATAAGATTTCACAGAGAGAATTGTGGCCAATTTAAAACATCCCTGCAGCCTGCATCATGTATCCTTTTATGGTATATATTTTAGTTATTTAATCAAAGTAGGAATTTCGTCTTCAAAACATATCTTGATGTGTGTGTTATGTGTTTATCCTCAGGTAAGTCAGGATGGCAAAGCCCTGCTAGATAAGCTCCAGCGCCCTTTGACCCCGGGCAGTGCTGATTCGCTGACTTCCTCGGCTAACTACTCCAAGGCTGTTCATCACGTTCTGGATATCATTCATGAGGTTCTGCATCACCAGAGG[C/T]AGTTGGAGAACATCTGGCAACACCGCAAACTCCGTCTCCACCAACGGCTGCAGCTTTGCGTCTTCCAACAGGACGTTCAGCAGGTCAGACAATTTTTAAAATGGGTGGGATGTTCACAAAATTGATGATTGGTTTGTATTATGGTTCTCTGGTCAAGGTTTTTGGTTTGATTCAGTTTACATTGGAAACAAAAACACACTTAAAGGGCCATGAAACCTCTTTTCACACCTCTACTTTGGAAAAAGTCAGAAAAGTGGGCGTGTCCAGCTCTGTTTAGGGGGAGTGTCGGAGGAACTAAAGTGGGGGGGTGGTGGAGTGTCTACTTGGGCACGTGCGAGTTTCAGAGTCAAAATACAGACACAGGAAAAAGTGAAGGTGTTTAACCTACATGGACATCTGTAGTTGAATTATTTGCCAAATTATTAAATGTTGGACTTTAACTGCAGTTTGGCTCTTTCATTCAGGGAATTCATTCATGTCCCTCGCGACAAACAAGATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39081
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 742 | 2996 | 12 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10194421)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8977667 |
GRCz11 | 16 | 8870003 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGAACGCAAGATCAAACTCGAACTTTTCCTCCAGCTCAGGATCTTTGAA[C/T]GAGATGCGATTGACGTAAGTCTACACTCCACCACACGGCTCAGTTGTCAT
Long Flanking Sequence:
CTAAGTTTTGAATAAAATTTGAAATGGCAAAAAATGACTTTAAAAAATGTAAAAGTTTTTTTTGTAGTGTACCATTTTCCAATTGTCATTTCAGACAGTCACCAGATGATTTAATATTAAATAGCATGAAATCAGACTTTTATGTTGATTTCCACCAATGATACTTGGCTTATTTTTTCACTGATTTTAGAACCTAGAGCTGCAGCAACTACTATAACCTAAAAACACACACTCAAATCACTGACCTGCAGAAGCTAATTAAACTACAGAAAGAATAGACTTCAACTCCTGTAGATGTTATCTCTGATATGTTCTCTCGTATCCTCTTCTGTGACTCCAGAGACTCCGCAATCTCTAGCAATAAGACTCCTCATAACAGCTCGATGGCACACATCGAGAGTGTCCTGCAGCAGCTGGATGAGGCTCAGGCTCAGATGGAGGAGCTGTTTCAGGAACGCAAGATCAAACTCGAACTTTTCCTCCAGCTCAGGATCTTTGAA[C/T]GAGATGCGATTGACGTAAGTCTACACTCCACCACACGGCTCAGTTGTCATTCCCAAATCACAAACCACTGATTTTGTTGTAAACAGTGAGTTTTTGCACTCAAGACAAATAGTTCAATATAGATCCTCTGCCCCTCGTCAATCTGAGAGATTCAATTTAATCAACTTTAGTTAACACTTTAGTTTAGGTCATAATCCATGCTATTAACTACTGGCTTATTACCATTAAGATATGAACTGTTCATTAGTAGTTATAAAGTATGATCTTATTCTGTATCCCTAATGCTACCCAAAACTTAAACCCAACTTCTTCCTTACTAACTATTAATAAACAGCTAATTATTAGTTTATTAAGCTAGTAGGGTTAGTTAATGGTCTGTTAATACCATAAATTATAACTTAAGCCAGGGGTGTCCAAACTCGGTCCTGGAGGGCTGGTGTCCTGCATAGTTAACTCCAACTTCCTCCAACACACCTGCCTAGAAGTCGAGTATACCTAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31000
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Essential Splice Site | 1304 | 2996 | 25 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10150306)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8933552 |
GRCz11 | 16 | 8831997 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTATTTAACATCCATTGTTTCCTTACTGTTGCTTTCCTCTCTTTCTCA[G/T]CATTTTCCTTAAAGAACTGGAAAAATATGAGCAGCTTCCAGAGGATGTGG
Long Flanking Sequence:
TGACCGTTACACTTTTCCCCATTCAAAACTATACAAGTGACACGTCTTGTGTATTCTATAGTCCTTGACTAAAGTTGAGGTTGTCCTTTTTTCTGACGTACATCTACTTGATATGGTTTCTGAAGTATAAAAAATGTATGGCGGTGCTTGATTTTCTTATTTTGGAGCCGGTTGGATCATTGGAAGATGGGCTTTGCTAACAAAACAAAAAAAAATACACATTGGGAATTTGCACCGAAATGTTTTTTATTTATTAATAGCATTAGTTTGTTATCAGAATTGTAACTGCAAGTGTGTTTGTGTGTTTTAGACTTATCTTTGGGAGATGAGCAGTGGCGTGGAGGAGATTCCCCCAGGGATTGTCAACAAAGAGCACATCATTTTTGGCAACATGCAAGATCTATACGAGTTCCATCACAAGTCAGTGAAGTTAATGTAAATAATAATTTCATTTATTTAACATCCATTGTTTCCTTACTGTTGCTTTCCTCTCTTTCTCA[G/T]CATTTTCCTTAAAGAACTGGAAAAATATGAGCAGCTTCCAGAGGATGTGGGTCACTGTTTTGTCACATGGGTGAGTGTGTCAGTGTGCTGGAGATAATCTGATCACGAAGCGCGCTGGCGTTATGTTGATATTAAATCAGATCCTTAGCACATATATCTGGGTTACTGCACTTACAGTGTACATACACCGTTTTATAAAAGTTATATATTATTTACATATGATATCACTTAATGAGTCCTTTATTTCAAAACTGAGAGATTAAACATAAATATTTATAAATGCTACTTAAAATAACTAATGAACAATAATATTCTCAGGATTCTTAGATGATAAAGAGTTTTTTTCAAAATGTCATTTTTAAGTAGTGTAACCTGTGATAATTATTTTTTTTTTAAAAAGTAACTTGAGCACCAAATCAGCATTGCTGGTTTGTGAAGGATCAGGCGAGCTCTGATATTGAAAATTTAGCTTAGGCATAATAATGCAATATTGTAATCGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17346
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 1932 | 2996 | 41 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10101636)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8884882 |
GRCz11 | 16 | 8783327 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGATTTTCAGCTACGTCCTGCTGGAACTGGTGGAAACAGAAAGAGACTA[T/A]GTGAGAGACCTTGGTGCAGTCGTGGAGGTGGGCTCATATTCACTTCTTTT
Long Flanking Sequence:
AAAACATAAGTAGGGTGAAACTAATTCAACAAACGGACAAAAGCACACTGTTTGAAAAAAAGCACACTGTTATACACTTACCGGCCCCTTTATTAGGTACACCTGTCCAACTGCTCGATAACGCAAATTTCTAATCAGCCAATCAATGGCAGCAAGTCAATGCATTTAGGCATGCAGACATGGTCAAGATGAGTTCAAACTGAGCATCAGAATAGGGACAAAAGGTGATTTAAGTGACTTTGAACGTGGCTGGTCTGATGATTTCTGAAACTGCTGATCCAGTGGGATTTTCATGCACAGCCATCTCTAGGGTTTACAAAGAATGGTAACATTGCGCATATTTAGTTATATTTCTTAATGATAAATTTGTACAAATACTGAATGTAATGGATTGTTTCAACCAGCCATCTTGGTTTGCTTGCTGTGTGAATATGAATATCTTTTCTCTCTTTGATTTTCAGCTACGTCCTGCTGGAACTGGTGGAAACAGAAAGAGACTA[T/A]GTGAGAGACCTTGGTGCAGTCGTGGAGGTGGGCTCATATTCACTTCTTTTAACAAATACAGCAGTGAGATCACTATGGCGACCACATGCAACCGCATACATTCATTCAACTACTCGTAATTGGCAGATGCTGTCAGGGTTGAGTTCTGGTTGTTCAATAGCCTGTCTATCTAAGGAGATCTGTCTACTGCGGTTTTGTGAACCGATCACGTGATCTTATTTGACTCTTTAAAAGTAACCCTGTGAATCTCATCAGCTGGCACAGGAAATGAAAATGGTGATGTGCCATACGTTCAGTATGGTGGCTCAGTAAAATAGCGTTTTGTATGTCGCTGTCACTATTGTAACCATGCACACGTGCACCTGCAGGGCTACATGAGCAGGATGAAGGAGGAGGGTGTACCCGATGACATGAAGGGCAAGGATAAGATTGTCTTTGGGAACATTCACCAGATATTCGACTGGCATAAAGAGTATGTGTCACCTCAGAAGCAATATCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10735
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Essential Splice Site | 1999 | 2996 | 43 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10101017)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8884263 |
GRCz11 | 16 | 8782708 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAAGTGCTTGGAGGACCCCGATAGACTYGCACCCCTSTTTGTCAGACAG[G/A]TAGGGAATGAATCATTGTGCCATTTCACTCTYACTAAKATAAATTCSCTT
Long Flanking Sequence:
ATTGGCAGATGCTGTCAGGGTTGAGTTCTGGTTGTTCAATAGCCTGTCTATCTAAGGAGATCTGTCTACTGCGGTTTTGTGAACCGATCACGTGATCTTATTTGACTCTTTAAAAGTAACCCTGTGAATCTCATCAGCTGGCACAGGAAATGAAAATGGTGATGTGCCATACGTTCAGTATGGTGGCTCAGTAAAATAGCGTTTTGTATGTCGCTGTCACTATTGTAACCATGCACACGTGCACCTGCAGGGCTACATGAGCAGGATGAAGGAGGAGGGTGTACCCGATGACATGAAGGGCAAGGATAAGATTGTCTTTGGGAACATTCACCAGATATTCGACTGGCATAAAGAGTATGTGTCACCTCAGAAGCAATATCAACTTGCCCTACTTTCATTTCCTAACATGAATTATTTAAACCCTGTCTAGTTTCTTTCTTGCTGAGCTGGAGAAGTGCTTGGAGGACCCCGATAGACTCGCACCCCTGTTTGTCAGACAG[G/A]TAGGGAATGAATCATTGTGCCATTTCACTCTTACTAAGATAAATTCGCTTTATCAGACTAATATTGATGAGCTAAACAAACAGACCAACCTAAACAAAATTGGTTTAACCAGTGGTGCTGCTTCTTGAAAAAAAGCACACTGTTATACACTTACCGGCCCCTTTATTAGGTACACCTGTCCAACTGCTCGATAACGCAAATTTCTAATCAGCCAATCAATGGCAGCAAGTCAATGCATTTAGGCATGCAGACATGGTCAAGATGAGTTCAAACTGAGCATCAGAATAGGGGACTTTGAACGTGGAATGGTTTTTGGTGCCAGACAGGCTGGTCTGAGGATTTCTGAAACTGCTGATCCAGTGAGATTTTCATGCACAGCCATCTTAAGGGTTTACAGAGAATGGTCCAAAAAAGAGAAAACATCCAGTGACCGGAACTTCTGTGGCCGCAGATGCCATGTTGATGCCAGAGGTCAGAGGAGAATGGCCAGATTGGTTCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28584
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 2011 | 2996 | 44 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10098388)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8881634 |
GRCz11 | 16 | 8780079 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGTACTTGGTTACAGGAACGTAGACTACACATGTACATCGTGTACTGC[C/T]AAAACAAGCCCAAATCTGAGCACATTGTTTCGGAGTACATAGACACGTAT
Long Flanking Sequence:
TATACTGTATCTATGAGTATGAGTATTACTAAAAAAAATCTTAGAAGCCTTTTAACCTTTCCATGGTTTTGGAAAAAGAAATTGACTCTGATTGGACAAGGAAAAATGAGCTACTTTTTATTCCTTTTGAGTGGGTGGGGCTGGACCTGGCAACCCTATGTGTCATACAGTATTTCTAATGCAGTTCTCTTTAGAATATGAACCCCAAGTGTTTTAAATATGATTATTTTTCTACCATATACCATCAATTCAATTCATTAACCCACTAGAGTCATACAGATTGCTTTTATTATGGATGGACTATAACAGTGTTCAATGATGGAACAATAAAGTTGCACCACAGCTGTTGTTATTGTTGCATAATCTATTTTAGCACAGCTAGAAAGATGTATTGATCAATCAATATGAGGTGTTTACATGATGACTGAGTCATAATGTTCTGTAAATGAAACTGTACTTGGTTACAGGAACGTAGACTACACATGTACATCGTGTACTGC[C/T]AAAACAAGCCCAAATCTGAGCACATTGTTTCGGAGTACATAGACACGTATTTTGAGGTAAGACTCCAGTCACTGCCTACATCCTTCTTGACATTTAACCATGAGTCATGAAAACTGAGACAGACTCATAACCACACTCACATCTCATCTTTTTGTTTTTGCTTGTAATTTCATCAGGATTTAAAGCAGAGGTTGGGCCACAGGCTACAGATCACAGATCTACTGATTAAACCAGTGCAGCGGATCATGAAATACCAGCTTCTGCTAAAGGTCGGATATGGAAATTACTAGGGGTGTAACGATACACTCAGCTCACGATACGATGTGTATCACGATATAATGTTCACGATTTGATATGTATCACGATATTTTGAATAAAAATTGAAAATTAAACTGAAATGCAAATTTTACCAAGTAAATTATTTTTTATGTATTTCTTTTGTTTCAACTTGTTAAACTGAACCTTCTTTAAGAAAATAAATTAAACAGGCCTGTCACTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36045
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 2134 | 2996 | 48 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10091096)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8874342 |
GRCz11 | 16 | 8772787 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTTCATGGTCTCAGATCAGGATGGTGGTCTTCTTTCTCGCTTGAAGGAG[A/T]GACGCATCTTCCTCTTCGAGCAGATAGTTATCTTCAGCGAGCCTCTGGAT
Long Flanking Sequence:
GTGGCAAAATCATGACGTGTGCTACAGGTGAATGGCTGGAGAAATGTTCATAAAGCTGGAGTGTCCACCAGACTCACTAGAGGGCACTCCAGCTTTATGAACGTTAGTCCTGATGACTGTATGATGTAACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATTATATATGTTATGTCAAAATAGACGTTTAATTTGGATGCGATTAATTGCAATTAGTCTTTGCCCAGCATTAATCTGACCAAAGTTTGCTATTCCTAGTCATTTACCCATAGGCATCCTAAAACAATCACAGAAAAGAACTTGTGTTTGTGTGTTTTTGCTTTTAATCTAAGCATTCTAGTGATCTCTGTGCTATGTTTGTTCAGGGTAAAATTGTAGCCCAGGGTCGACTGCTTCTTCAGGATACCTTCATGGTCTCAGATCAGGATGGTGGTCTTCTTTCTCGCTTGAAGGAG[A/T]GACGCATCTTCCTCTTCGAGCAGATAGTTATCTTCAGCGAGCCTCTGGATAAAAAGAAGGGATTTTCTATGCCAGGCTACCTTTTTAAGAACAGCATAAAGGTATGTAGGTATAACCACTGCTGTAAAAAAAAAACACTGTGGCACAACATAGACCTTATAAATCCATGTCACTCTTTTCCTGCAGGTCAGTTGGCTGGGTCTAGAGGAAAGTCCTGACAATGACCCTTGTAAGTTTATTTTGACCTCAAGGTCATCGGCTGGCAGTTTAGAGCATTACGTCCTCCATTCCTCCAACCGGGTGGTTTGCCAGACCTGGATCCACCAGATCAGCAGCATCCTGGAGAACCAGAGAAACTTCCTTAATGGTATTATTCAGACAGTGTCCTTTAAACTAATCGTCATAAATATTTTTAATGATTATTAACTTTTGTAGCTTTGCTACATTCATTCAAGATGATTTGTTTGATGATTTACATGTTTTAACCAACCAGAGTTAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12241
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Essential Splice Site | 2228 | 2996 | 49 | 59 |
ENSDART00000000382 | Essential Splice Site | 2228 | 2996 | 49 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10090727)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8873973 |
GRCz11 | 16 | 8772418 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCCACCAGATCAGCAGCATCCTGGAGAACCAGAGAAACTTCCTTAATGG[T/A]ATTATTCAGACAGTGTCCTTTAAACTAATCRTCATAAATATTTTTAATRA
Long Flanking Sequence:
AATCTAAGCATTCTAGTGATCTCTGTGCTATGTTTGTTCAGGGTAAAATTGTAGCCCAGGGTCGACTGCTTCTTCAGGATACCTTCATGGTCTCAGATCAGGATGGTGGTCTTCTTTCTCGCTTGAAGGAGAGACGCATCTTCCTCTTCGAGCAGATAGTTATCTTCAGCGAGCCTCTGGATAAAAAGAAGGGATTTTCTATGCCAGGCTACCTTTTTAAGAACAGCATAAAGGTATGTAGGTATAACCACTGCTGTAAAAAAAAAACACTGTGGCACAACATAGACCTTATAAATCCATGTCACTCTTTTCCTGCAGGTCAGTTGGCTGGGTCTAGAGGAAAGTCCTGACAATGACCCTTGTAAGTTTATTTTGACCTCAAGGTCATCGGCTGGCAGTTTAGAGCATTACGTCCTCCATTCCTCCAACCGGGTGGTTTGCCAGACCTGGATCCACCAGATCAGCAGCATCCTGGAGAACCAGAGAAACTTCCTTAATGG[T/A]ATTATTCAGACAGTGTCCTTTAAACTAATCGTCATAAATATTTTTAATGATTATTAACTTTTGTAGCTTTGCTACATTCATTCAAGATGATTTGTTTGATGATTTACATGTTTTAACCAACCAGAGTTAGGTGTAATTAGTTACAAAGTAACTAACTACTGTAATTAAATTACTTTTCTGCTAAAAAGTAAACTATGGGATTCATTTGAACTTATCATGTACTTGCATTAAATGCATGTAAATAAATGTAACATTAGTGTATAAAGCAGAGGAAATATTTTTTGTTTTACAATATGTTTTGTCAAATAATTGTATTTTTAAGTAAAGAAGATTGAATTCATCTCTGATGATTATACATGACTAAATAAGTAAAGAAATTACAAAATATAAGGTATAGATTCAAAGAAGCAAAGTACATGTGTGTATTTATATACTAGGGATGTCAAAATGAATTGATTCATAGATGCACTGTGATGCAGACACAAACAATTCGGTATCGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22757
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Essential Splice Site | 2228 | 2996 | 49 | 59 |
ENSDART00000000382 | Essential Splice Site | 2228 | 2996 | 49 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10090727)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8873973 |
GRCz11 | 16 | 8772418 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCCACCAGATCAGCAGCATCCTGGAGAACCAGAGAAACTTCCTTAATGG[T/C]ATTATTCAGACAGTGTCCTTTAAACTAATCGTCATAAATATTTTTAATGA
Long Flanking Sequence:
AATCTAAGCATTCTAGTGATCTCTGTGCTATGTTTGTTCAGGGTAAAATTGTAGCCCAGGGTCGACTGCTTCTTCAGGATACCTTCATGGTCTCAGATCAGGATGGTGGTCTTCTTTCTCGCTTGAAGGAGAGACGCATCTTCCTCTTCGAGCAGATAGTTATCTTCAGCGAGCCTCTGGATAAAAAGAAGGGATTTTCTATGCCAGGCTACCTTTTTAAGAACAGCATAAAGGTATGTAGGTATAACCACTGCTGTAAAAAAAAAACACTGTGGCACAACATAGACCTTATAAATCCATGTCACTCTTTTCCTGCAGGTCAGTTGGCTGGGTCTAGAGGAAAGTCCTGACAATGACCCTTGTAAGTTTATTTTGACCTCAAGGTCATCGGCTGGCAGTTTAGAGCATTACGTCCTCCATTCCTCCAACCGGGTGGTTTGCCAGACCTGGATCCACCAGATCAGCAGCATCCTGGAGAACCAGAGAAACTTCCTTAATGG[T/C]ATTATTCAGACAGTGTCCTTTAAACTAATCGTCATAAATATTTTTAATGATTATTAACTTTTGTAGCTTTGCTACATTCATTCAAGATGATTTGTTTGATGATTTACATGTTTTAACCAACCAGAGTTAGGTGTAATTAGTTACAAAGTAACTAACTACTGTAATTAAATTACTTTTCTGCTAAAAAGTAAACTATGGGATTCATTTGAACTTATCATGTACTTGCATTAAATGCATGTAAATAAATGTAACATTAGTGTATAAAGCAGAGGAAATATTTTTTGTTTTACAATATGTTTTGTCAAATAATTGTATTTTTAAGTAAAGAAGATTGAATTCATCTCTGATGATTATACATGACTAAATAAGTAAAGAAATTACAAAATATAAGGTATAGATTCAAAGAAGCAAAGTACATGTGTGTATTTATATACTAGGGATGTCAAAATGAATTGATTCATAGATGCACTGTGATGCAGACACAAACAATTCGGTATCGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6408
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Nonsense | 2456 | 2996 | 51 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10087119)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8870365 |
GRCz11 | 16 | 8768810 |
KASP Assay ID:
554-5284.1 (used for ordering genotyping assays)
KASP Sequence:
TTTCTGCTGTCAGAGTGAAAGCAGCAGCAGCAGCAGTGTGTCYACCATGT[T/A]GGTGACCCAGGACTACGTGGCTCTAAAGGAGGATGAGATCAGCGTATATC
Long Flanking Sequence:
CAAAGGTAAAATGCATGGACCTAAAAGTCAAACAACGATTTAAGTTTCTGTTAACCTACAGCACCTTAAGGGGAAATCCCACTAGAGGCAATTTTCAGTAATAAAAGGCAAGGAGTCATTCATTTTAAATAGAAGTAGGCTATCAGAGACAAAGTGATCAATAGACACGGTGAATAAATGCTCTAGCAAATATGAGTAGGGGTATAGACATCGAAACTCACACCATCCACCTCATGATACACTTAGTACAGCATCTAGATAACATCAAGCTCTTAATATGAACAACTCGTAGGAGGATCTTGTAAACTAAAATGACTTTGCTTTGTAAATAAACTTTCCTAGAACTGCTCTCACTTGCATCATTCTTGCTCTCTGGCATGTCCAGCTCACTAAATGTCTTGAAAATACTTCAAAATAACATCACGCTATTATGCTAATACTGTGTGTATGTTTCTGCTGTCAGAGTGAAAGCAGCAGCAGCAGCAGTGTGTCCACCATGT[T/A]GGTGACCCAGGACTACGTGGCTCTAAAGGAGGATGAGATCAGCGTATATCAAGGAGAAGTTGTGCAGATATTGGCGTCTAACCAGCAGAACATGTTTCTAGTATTCCGTGCCGCCACAGAACAAGGCCCAGCAGCTGAGGGCTGGATCCCCGGCTACGTTCTGGGTCACACCTCCATCATCATTCCCGACTACCCTGATGGAACCCTCAAGTGAGGATTGGATATTAATTGTTATATGTTATAAAGACTGTTATTTTATATTATTTGTTATAAATCTGACTCTTCAGTCAGATTTAAAGTGAAGACACACCATAAGTCTTTATAACTGGGTAAATTATGTTAACCAGTACTCATGTATCATGGCTGTAGCAGGCACAATGAAAATATGCTGCACATGGAAATAGTACCCAGTTAGCTAACTAGGTAAATTGTTAACCAGTACTTTCTTAGGTAAATACATTGTACAGTAAGTGCCAGATATGACTATGTTACTATTAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42662
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000382 | Essential Splice Site | 2769 | 2996 | 57 | 59 |
Genomic Location (Zv9):
Chromosome 16 (position 10080463)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 8863709 |
GRCz11 | 16 | 8762154 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGCTGGACACCTACGAGACCCCAGCCAGCTATGTTCTCATCCTGGAGAT[G/T]TACGTGTAATGTATAGTCTTCACACAATTGACTCTAGAACTGTTACATGG
Long Flanking Sequence:
TCATCAGCCTACCTCAGAGTGCTCGGTCAGCTGACTTTATCAATCTGTTTATTAATCTTTTACTTTTTAGTTTTCTCCACGTTTGATAATTGAGTCTGTGACGTTGTTATTTTGTACATAGGCACATCCTGTGACGGAATTCTCTGGAAGGATAACTTTGAGTCTCTCTACACTGAAGTTATGGAGCTTGGGAGGTACTGTACAAATTAACTGCTGAATTAAAACACAACCTTCTTCTATGCAAACTACTGTACTTATGTTTTATAATAGCTAAAAATATGTTTGATGTTCCTCTTTAGAGGCAGGTTTGCCGTCACTAAGTGGTGTGAGCAGAGAGGAAGCAGGCGATCTGTGGCCGCAAAGCTCGTCAACAAGAAGCTAATGCGTCGAGAGCAGGTGGTTCAGGAGCTGGGGGTTTTACAGTGTCTTCAGCACCCTCACCTAGTGGGCTTGCTGGACACCTACGAGACCCCAGCCAGCTATGTTCTCATCCTGGAGAT[G/T]TACGTGTAATGTATAGTCTTCACACAATTGACTCTAGAACTGTTACATGGAACAAAATGACCAATTGCTGTTTTACACAGTATGTCTGATAATATTTTTTCTTCTTTAGAAAGTTGTATTTGATTTATTTTGGCTAGAATAAAATCAGTTTTTAATTTCTTATAAATCATTTTAAGGTCAATATTGTTAGCCACTTTAAGCTAGATTTTTTTCAATAGTCTACAGAACAAACCATCGTTACACAATAACTTGCCTTATTACCCTATTCTGCCCAATTAACCTAGTTAAGCCTTTAAATGTCACTTTAAGCTGTATAGAAGTTAGGGATGCCACAGTTCTCAATATAATATTGAACCGTACAGTACGACCTCCATGGTTCAATACGCGCTTGTGAATTGCGGTTTTCTCGGTTTTGCGTTTAAATAATTTATGTGCGTTTTATATCTCCCCGAATTGACTGTGTGTGCCTGTAAGTCCATGATCTGAGATAAGGAAACTCC
Associated Phenotype:
Not determined