ZMP

cacna1da

Ensembl ID:

ENSDARG00000024004

ZFIN ID:

ZDB-GENE-030616-135

Description:

voltage-dependent L-type calcium channel subunit alpha-1D [Source:RefSeq peptide;Acc:NP_982351]

Human Orthologue:

CACNA1D

Human Description:

calcium channel, voltage-dependent, L type, alpha 1D subunit [Source:HGNC Symbol;Acc:1391]

Mouse Orthologue:

Cacna1d

Mouse Description:

calcium channel, voltage-dependent, L type, alpha 1D subunit Gene [Source:MGI Symbol;Acc:MGI:88293]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa1422	Essential Splice Site	Available for shipment	Available now
sa17298	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa1422

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000058276	Essential Splice Site	494	1716	13	40
ENSDART00000089956	Essential Splice Site	860	2083	22	50
ENSDART00000100118	Essential Splice Site	835	2069	21	50

Genomic Location (Zv9):

Chromosome 11 (position 37699880)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	36597108
GRCz11	11	36859091

KASP Assay ID:

554-1343.1 (used for ordering genotyping assays)

KASP Sequence:

GTCATTGGCTGCTGAGGATCCAATCAGAAACTTCTCTGCTAGGAAYATTG[T/A]GAGTATTACCACAGTAATGCCAAGATTATACAGTAAAGTYCAAACCATTT

Long Flanking Sequence:

TTCATTGATTCATTTGAAAATGTATTGATGTTGAAGCAATTTGTAAGTTAATATTTTAATTTAGGATTGGCATTTTATGATATATTTTTGTTATGGTTATAGAAGCATGATCTAAGAATATTAAAAATTACACAATTGCTAAAAATGCATTATTTCTTTAAAATGAATATGCTGTAATATTATAATAAATGGTAAATTATTTAGATGTTTGGACAGAACATGTGACAAAAAATGGATTAGAATTAACATTTTTATTTTTTAAAAGTCAGCAGTCAACCTATTCTATTGTTATTCTTTTTTGACACATTAAAGGTTTCTAAACCCTGAAAATATTTAAGTCATTCTCTGTCTCTCTTTGTTTCTCTCTAGAGTTCGAGTCGCCTGCCACAAGCTGATAAACCACCACATCTTCACCAACCTCATCCTTGTGTTCATTATGCTAAGCTCAGCGTCATTGGCTGCTGAGGATCCAATCAGAAACTTCTCTGCTAGGAATATTG[T/A]GAGTATTACCACAGTAATGCCAAGATTATACAGTAAAGTCCAAACCATTTCATAGATAGTTGAACTAAAACAATATTTTAGTTAAATATTGCCATCATGAAATGTTTTATTTATTTATTTATTTATTTAACTAACTTTTACTTATTTATTTATTTATTTTTATTTTACTTTTATACTTTTTATTTATTTATTAGCTTACTTTTAGACTTTTATTTATTTATACTTTTATATTTTTACTTATTTTATTTTTATTTATTTACTTTTACTTTTAACTTTTTTATTTATTTACACATTTATATTTTCATTTATTTTTATTTATACTTATATTTAGTTGTATATATGTTTTACTTTTAAACTTTAATTTATTTATTTATACTTTTATCCTTTGATATGTTTGTTTTATTTATTTATTTATACTTTTATTAATTTATTTATACTTTTATCCTTTATTTGTTTATACTTTTATTTTTATTTATTTATTTATTTATACATTTATTATA

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461

Mutation Details

Allele Name:

sa17298

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000058276	None	None	1716	None	40
ENSDART00000089956	None	None	2083	None	50
ENSDART00000100118	Essential Splice Site	855	2069	22	50

Genomic Location (Zv9):

Chromosome 11 (position 37698393)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	36595621
GRCz11	11	36857604

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ATGCAGATTATGTCYTCACTAGTATGTTTACATTTGAGATCGTGTTAAAG[G/A]TAACCTTTCGGCACACAGGCCTGGCTGCATTATCYCCATRTGTGTCACCT

Long Flanking Sequence:

TGAAAAAAAACTGTAATTATTTCAACAATATGATTTTATTGAGGCAAATTTTTCAGAAAATCTGGTAATATTTTTTCTGTGCTTCTGTTATTCCTTCCTGTCATTATGTTTTCTAACCTATTTCTTTCAAACTAAGGAATCTACCTTTACTGAAACACTTGTTTTTGTGGTGTTACCAAAAAAGACACACTGGTACACCCTGGATTAATTAATCAAAGATAAACCTACACATCTAAATCTATATAATCTGATGATAAACAATGATGTATTTTCTTTTTGTTAAACATGTATATTGCTCTTTGCAGATACTTGGTTACTTTGACTATGCTTTCACGGCTATCTTTACTGTAGAGATCGTGTTAAAGGTAAATGTCCTTGCCTGTGCTGGTGTTGTGTGTGGTGTATGTGCAGTAACGCTGTAACCGTCTGGTTTATTCCAGGTCCTAGGCTATGCAGATTATGTCTTCACTAGTATGTTTACATTTGAGATCGTGTTAAAG[G/A]TAACCTTTCGGCACACAGGCCTGGCTGCATTATCTCCATGTGTGTCACCTGCTACTTCAGTACTTCCTGGCTTGATCAATCTCTTTTCTTTCTATTATTTAAACCATAGCACCTCTTTTACTAAATGACTCAAAGAAAAAGTCTCCGAACATCCTCATCAAAGCACAAGAGTTGTCAGGTTTTCACTTTTGTTTTGGGGAGAACGACAGGGCTTGAAGTCAACCCTGATTGGTTAAAGTGGGGTTAAGAAAAGAGATCTGGAGAAATCACACAGGAAGTGTCTGTGAAACTAAAACGTTGTTGAAAAAAATACGAAAAGATAAAACTATGCAACTCTTTGTGAAATGAAAAACAGCATTGCCTCTCTCATGCCTTCATAACTGATTGGCCCGTTTCCAGTCCATAAAAGAGGGGGCAAATACAACCATGCTTGGACAGAACATGGTTCAAACCCCTTGGCTGAGTGCATATCAATGCAATGTGACCTCAAGCGCCGTGTG

Associated Phenotype:

Not determined