ZMP

hoxc11a

Ensembl ID:

ENSDARG00000070351

ZFIN ID:

ZDB-GENE-990415-111

Description:

Homeobox protein Hox-C11a [Source:UniProtKB/Swiss-Prot;Acc:Q58EL0]

Human Orthologue:

HOXC11

Human Description:

homeobox C11 [Source:HGNC Symbol;Acc:5123]

Mouse Orthologue:

Hoxc11

Mouse Description:

homeobox C11 Gene [Source:MGI Symbol;Acc:MGI:96193]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa17170	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa17170

Status:

Available for shipment
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Availability:

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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000103146	Nonsense	239	306	2	2
ENSDART00000133760	Nonsense	235	302	2	2

Genomic Location (Zv9):

Chromosome 23 (position 36128537)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	35978190
GRCz11	23	36076993

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTTTTTATANTTTTTATCCTAAGGTACCCCGCGCACAAGAAAGAAGAGATG[T/A]CCATACTCCAAATTTCAGATTCGTGAACTGGAGCGAGAATTTTTCTTTAA

Long Flanking Sequence:

GCCAAATGCACGCATTAATATGATGCAAAACAGGGATAATTGCACAGACCGAAAAAACACTCTCTACGATCAAAAGATTAAAGAAGAACATTTATTTACCGAGTTTATCAGTTATATGTTGTTGTTGTTTTTTTTTTTTTTTTGCTGCTGCTGTTGTTATTAGTATTATTGTTATTGTGATAATTATTTTGTATTTAAGATTTTTATTTTCCCCAGGGTTACAAAAATTGTAGAGTGACAAATTGTGTTTGCTTCCTCACATTGGTAACCATAGATGCAGTCCACGAGGCATTTAGTGAAATTTGATATTACAAATGTATCTTCAATAAATAAATGAACAAAAATAAAATAAAAAAATGTACATTTATAAACATCTCATTTTGTTTTTGCTGAAAATAAATGTTGCTTTAAAATGTTTATTTTAAAATGTTAATCATTGTAATTGTCTCTTTTTTTATATTTTTATCCTAAGGTACCCCGCGCACAAGAAAGAAGAGATG[T/A]CCATACTCCAAATTTCAGATTCGTGAACTGGAGCGAGAATTTTTCTTTAACGTTTACATCAACAAGGAGAAAAGGCTACAGCTATCCAGAATGTTAAACCTTACTGACAGACAAGTCAAAATATGGTTTCAAAATCGTAGAATGAAAGAAAAGAAATTAAGCAGAGATCGCCTGCAGTATTTCTCTGGAAATCCGTTGCTGTAATTGTTGAAATGGCGTTGCCTGTTATTTAATATTTTTGCAAACAAACTCTATTAAATATGTCAAATATGCCCTTCAGTCTAATTAAATAATTAGATATGTTTTTGTCTAGGCCAGCAACAGTACTGAAGAAGCCTAAGACAGTTGGAGGCTAACAGGATTGTAATGGCTGAGGGTGGGGACAGACAATACAAATTTGCTTAATGTCAAACTGATATTTCAAGTTTAAAGTTCACAAACCAAAACGTAATCTTCACAAACTTAAGGTTTCTATTTGTTTGTGACCCGTCTTTTAAGTG

Associated Phenotype:

Not determined