ZMP
samsn1a
Ensembl ID:
ZFIN ID:
Description:
SAM domain, SH3 domain and nuclear localisation signals, 1a [Source:RefSeq peptide;Acc:NP_001122141
Human Orthologue:
SAMSN1
Human Description:
SAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:10528]
Mouse Orthologue:
Samsn1
Mouse Description:
SAM domain, SH3 domain and nuclear localization signals, 1 Gene [Source:MGI Symbol;Acc:MGI:1914992]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17145 | Essential Splice Site | Available for shipment | Available now |
| sa2821 | Nonsense | F2 line generated | Not yet available |
| sa7235 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa28476 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa17145
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000076749 | Essential Splice Site | 112 | 621 | 6 | 16 |
| ENSDART00000099947 | None | None | 333 | None | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 28928297)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 29646327 |
| GRCz11 | 15 | 29579203 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GWTGCACAGTGACATTTRAAAACTAAATAGGTCRAATRTGTTTGCATTTC[A/T]GATCTGAGGAGAGCTGTAAGGACAGAAAACCAGACAATGGCAAACTTAAA
Long Flanking Sequence:
TAGAATTTTTTTATTTTATTCATGCTAAAATTAATGTAGAAATACAACTTTTTTTTTACTGTTGTATTTACTGTATCATATAATTGAGTTTAATCAGCATAACTAATGTTAAATATAACGTATCTTGTTTTTTTCATAAGAGTCAACATATGTCTATAATCTGAATTTTAAAAGCTGGTGATAATGTTGTTAAACCAGTCTGTATGGATGCATCACATTTCCTTGACTAAGCAGAGTAAATCTACCTGCCACATGGTATTTCCCCTCATCAAAATGTGTGAAGAAGCAAAACAGGAAATGAGGTGCAAAACCACACAACTTTTCTTATACGGAATGAACTATTTTGAGCTTTGCGTTGGTTAACCCTTGCCATTTAGATATTCAGAGATTTTAAAATCTTGTTTTTTGATGCACTGAAGTCTAAAATAAATTCCCAAATAAAACCCAAAAGATGCACAGTGACATTTGAAAACTAAATAGGTCAAATGTGTTTGCATTTC[A/T]GATCTGAGGAGAGCTGTAAGGACAGAAAACCAGACAATGGCAAACTTAAAGATCATCGCAAGAAACCCACAGCAAGAGAGCCAGCCAATCCAGGTCACAAAAATATTTAAAAAAAATAATAATAAATCACGTTTACTGCATGCCACAGAGCTGGACTTACATAATTAAGAGTATGAAATATTAAATATTATACGATAATATGTCATTCAGTGTAACGAGTTTATATACCATAAAATCTGATCTGATGACATTAAAACACTATTTAAGGATCATATTAAAGCCTCAAAAAATAATTTAAATCGTTACACTTTGCCACTGTCATTAAAAACCATTTGAAAATGTTTTTTCGCATTTGACAGTACTAAAATCATTCAATAATCACTCATATTTCTGTACATTTCAGGTCAGAATATACTGTAAAAAAAGTTGCTGTTGGCCTATGAATCAAATTAAAAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2821
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000076749 | Nonsense | 213 | 621 | 9 | 16 |
| ENSDART00000099947 | None | None | 333 | None | 8 |
| ENSDART00000076749 | Nonsense | 213 | 621 | 9 | 16 |
| ENSDART00000099947 | None | None | 333 | None | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 28925646)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 29643676 |
| GRCz11 | 15 | 29576552 |
KASP Assay ID:
554-3317.1 (used for ordering genotyping assays)
KASP Sequence:
AAAGATCCTAGTAAAGGTGCCAAAGGAACGATGCCTGATGTAGGGATGTG[G/A]TCACAAAATCCGGATATATCTTGTACCTCTGAAGGTTTGAGGGTCAAACA
Long Flanking Sequence:
AAATATAAATCTCATATATTTGCAGAGCCAAAAACTTGAATTGCAGATATTTTTTGGCTACAATAATGATTTTTGTTGAAACCCATGTCATTAGCTGTGTTTCCATTTTAAAGTTGCGAGTTTAAGAGAAGTGTATAATTGCATAAAAGTAATTTGCAAATAAATCATCATATCCATTCCAACAAGAAAACAAAATCGTTATTTCTGGAAAAGGGAAAAAACACTGCAACTAAATTTTTCCCACATAAATAATTACCCGCACAGACAACACACACTAAAAATTACTTGCATGTTTGGGAACTTGATATTGTGAGACGGTTGTTGTATTGTGAAAAACAATATCTATCTCAATTTAAAAAAAAAAGATTTTCTGATAATCTTAGCATATCCATTGATAATTCACACAAAATTGTTGATTGTTGTTATTTATTTTTACTATCTTTGTCACCTAAAGATCCTAGTAAAGGTGCCAAAGGAACGATGCCTGATGTAGGGATGTG[G/A]TCACAAAATCCGGATATATCTTGTACCTCTGAAGGTTTGAGGGTCAAACAGATTGCAGCATCCAGCAGAAATCGCTGGAGTAACCCCACTGAAAGCACCTGGGTTCAAGCCTACAACCCCTGTCAGCCTCAACTCAGTGAACATCGCATCCACACCTGTGAGTGCACTGCATCCAGAAACAGGAGTCAAGGAGACAAAATCAATGGCCCAAATATGAAGAGAGACTCCTTGCCCAAAGGAATGATGCGCTCCACGACCAGTGTAGATTTCTGTGCCTCTAAAGTAAGTCATAATTGATGTACACACTCAAAAAAAAAACTCATTGGATAGATTGTCAGGATCTCTATCCAATTAACTTGTTTAGCACCAAATAAAAAAATATTTATACAATTAATTGCAACTGAGTTGGTCCAACCTGGTTTTATCAAATAAAAGTTTGAATACATTTGTATTTCTATTTACCAAACTCAAAGGTCTGATAATATCATGAATGTCTATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7235
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000076749 | Nonsense | 213 | 621 | 9 | 16 |
| ENSDART00000099947 | None | None | 333 | None | 8 |
| ENSDART00000076749 | Nonsense | 213 | 621 | 9 | 16 |
| ENSDART00000099947 | None | None | 333 | None | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 28925646)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 29643676 |
| GRCz11 | 15 | 29576552 |
KASP Assay ID:
554-3317.1 (used for ordering genotyping assays)
KASP Sequence:
AAAGATYCTAGTAAAGGTGCCAAAGGAACGATGCCTGATGTWGGGATGTG[G/A]TCACAAAATCCGGATATATCTTGTACCTCTGAAGGTTTGAGGGTCAAACA
Long Flanking Sequence:
AAATATAAATCTCATATATTTGCAGAGCCAAAAACTTGAATTGCAGATATTTTTTGGCTACAATAATGATTTTTGTTGAAACCCATGTCATTAGCTGTGTTTCCATTTTAAAGTTGCGAGTTTAAGAGAAGTGTATAATTGCATAAAAGTAATTTGCAAATAAATCATCATATCCATTCCAACAAGAAAACAAAATCGTTATTTCTGGAAAAGGGAAAAAACACTGCAACTAAATTTTTCCCACATAAATAATTACCCGCACAGACAACACACACTAAAAATTACTTGCATGTTTGGGAACTTGATATTGTGAGACGGTTGTTGTATTGTGAAAAACAATATCTATCTCAATTTAAAAAAAAAAGATTTTCTGATAATCTTAGCATATCCATTGATAATTCACACAAAATTGTTGATTGTTGTTATTTATTTTTACTATCTTTGTCACCTAAAGATCCTAGTAAAGGTGCCAAAGGAACGATGCCTGATGTAGGGATGTG[G/A]TCACAAAATCCGGATATATCTTGTACCTCTGAAGGTTTGAGGGTCAAACAGATTGCAGCATCCAGCAGAAATCGCTGGAGTAACCCCACTGAAAGCACCTGGGTTCAAGCCTACAACCCCTGTCAGCCTCAACTCAGTGAACATCGCATCCACACCTGTGAGTGCACTGCATCCAGAAACAGGAGTCAAGGAGACAAAATCAATGGCCCAAATATGAAGAGAGACTCCTTGCCCAAAGGAATGATGCGCTCCACGACCAGTGTAGATTTCTGTGCCTCTAAAGTAAGTCATAATTGATGTACACACTCAAAAAAAAAACTCATTGGATAGATTGTCAGGATCTCTATCCAATTAACTTGTTTAGCACCAAATAAAAAAATATTTATACAATTAATTGCAACTGAGTTGGTCCAACCTGGTTTTATCAAATAAAAGTTTGAATACATTTGTATTTCTATTTACCAAACTCAAAGGTCTGATAATATCATGAATGTCTATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28476
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000076749 | Nonsense | 287 | 621 | 9 | 16 |
| ENSDART00000099947 | None | None | 333 | None | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 28925426)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 29643456 |
| GRCz11 | 15 | 29576332 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATCCAGAAACAGGAGTCAAGGAGACAAAATCAATGGCCCAAATATGAAG[A/T]GAGACTCCTTGCCCAAAGGAATGATGCGCTCCACGACCAGTGTAGATTTC
Long Flanking Sequence:
ACACTGCAACTAAATTTTTCCCACATAAATAATTACCCGCACAGACAACACACACTAAAAATTACTTGCATGTTTGGGAACTTGATATTGTGAGACGGTTGTTGTATTGTGAAAAACAATATCTATCTCAATTTAAAAAAAAAAGATTTTCTGATAATCTTAGCATATCCATTGATAATTCACACAAAATTGTTGATTGTTGTTATTTATTTTTACTATCTTTGTCACCTAAAGATCCTAGTAAAGGTGCCAAAGGAACGATGCCTGATGTAGGGATGTGGTCACAAAATCCGGATATATCTTGTACCTCTGAAGGTTTGAGGGTCAAACAGATTGCAGCATCCAGCAGAAATCGCTGGAGTAACCCCACTGAAAGCACCTGGGTTCAAGCCTACAACCCCTGTCAGCCTCAACTCAGTGAACATCGCATCCACACCTGTGAGTGCACTGCATCCAGAAACAGGAGTCAAGGAGACAAAATCAATGGCCCAAATATGAAG[A/T]GAGACTCCTTGCCCAAAGGAATGATGCGCTCCACGACCAGTGTAGATTTCTGTGCCTCTAAAGTAAGTCATAATTGATGTACACACTCAAAAAAAAAACTCATTGGATAGATTGTCAGGATCTCTATCCAATTAACTTGTTTAGCACCAAATAAAAAAATATTTATACAATTAATTGCAACTGAGTTGGTCCAACCTGGTTTTATCAAATAAAAGTTTGAATACATTTGTATTTCTATTTACCAAACTCAAAGGTCTGATAATATCATGAATGTCTATTATGTGTTGTACATTTCAAAGTCTCTTTAAACTCAGTTATCCTAAATTAAATAAAAGAGCTATTTTAAGCATATTGCAGGAGTTACATATACAGTTGATTGAGACTGATCTCAGAACTAATCTTAGAAAAGTTATTGCTCATTGAGCAAAGCAACAAACTGCATTTTTGCTAATTAAGCTGCCAACATTCAAAGAAACCCGTGCTTCTGCAAGGTGGTAATC
Associated Phenotype:
Not determined