ZMP
ubr3
Ensembl ID:
ZFIN ID:
Description:
Ubr3 protein [Source:UniProtKB/TrEMBL;Acc:Q1JPS8]
Human Orthologue:
UBR3
Human Description:
ubiquitin protein ligase E3 component n-recognin 3 (putative) [Source:HGNC Symbol;Acc:30467]
Mouse Orthologue:
Ubr3
Mouse Description:
ubiquitin protein ligase E3 component n-recognin 3 Gene [Source:MGI Symbol;Acc:MGI:1861100]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa17047 | Nonsense | Available for shipment | Available now |
sa16003 | Nonsense | Available for shipment | Available now |
sa34547 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa10176 | Essential Splice Site | Available for shipment | Available now |
sa2488 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa17047
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047723 | Nonsense | 196 | 288 | 5 | 6 |
ENSDART00000062336 | Nonsense | 97 | 607 | 3 | 14 |
ENSDART00000129091 | Nonsense | 444 | 954 | 8 | 20 |
ENSDART00000129693 | Nonsense | 97 | 607 | 3 | 15 |
The following transcripts of ENSDARG00000042508 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 3944302)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 3960681 |
GRCz11 | 9 | 3932210 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCCGCTTTGCCGCCAGTTTGCAAACAGTGTTTTACCTTGTCGTCCTGGA[C/T]GAGGGATGGAAACCGGAGCCTGGCAYGCACCCAGTACCAAGAGCATGTCT
Long Flanking Sequence:
GCATAGTCTCTGGGAACCTCGGGATGAGTATCTCCAGGTGGAAATAAAGAATAAAGAGAATAATTAGCGTAGCTGCTGTTCACAAACATGACCTCCGTACAGAAATTTTAAGTATGGAGCAATCACTGCTTTTTTTAATGTCTAATCATCTTGTTTAATCTCACCTCTTTTCGCAGCGCTGTACTACAGAATTCTACAAGCTCAAACTCTAGTGTGACCATGGCATGAGAACAGAAAAAAACAACAGTATAGAGCAGACTGAATGCTTTATGAATAGTCAGTGAGACATTAGCCAATCATGACAAAAAGGATACTGTATCACCTGTTTTTGAGAACTAGTCAGCCATTAAACTTCATTAAATCAACCATTACCGAACCTGTTGTATTTGCTTGTTTTGCAGAATGATCAGGTTCTTCAGGGGATTTCTGTGGATAAAGGCGAGTTCACTTGTCCGCTTTGCCGCCAGTTTGCAAACAGTGTTTTACCTTGTCGTCCTGGA[C/T]GAGGGATGGAAACCGGAGCCTGGCACGCACCCAGTACCAAGAGCATGTCTACACTGGTGAAAGAAGTAGAAGACCTCCAGGAGCAGCTGGGCATTTTCCCAGTAAGAGCCAGCATAAAGCAAAGAGATCCCATTCTGGTATTTATTAGAGTGCTCCCCATCCCCTCTTTTCTGTTCTTTCCATCTCATCCCTCCATTCTGATTCAGAGTAAGAGCTGGTGCCACACTGACCTTCATGTGATCTTTCATGCCCCATCTAACATTGCTGTGGTTTAACTTCTCATAATGCAAAGACTCAAGTTGGTGTCATATATGCATGTCAAACATTAGTGAGGTACTGAATTTTCTGTCACTGAAACTGAAAGACAAAAATAGCCATAAATAAGTGTATGAGCCAAATTGTGTCCCTTTCAGTTTGCTGGTTTTGCTCTCCCTGCACTGTGAGAAGCGGCTTTCACACTGGACAAACAAAGCACTGCGCTATGAAACCCGTTCATTTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16003
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047723 | None | None | 288 | None | 6 |
ENSDART00000062336 | Nonsense | 224 | 607 | 6 | 14 |
ENSDART00000129091 | Nonsense | 571 | 954 | 11 | 20 |
ENSDART00000129693 | Nonsense | 224 | 607 | 6 | 15 |
The following transcripts of ENSDARG00000042508 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 3933145)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 3949524 |
GRCz11 | 9 | 3921053 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCACGTGCTGGCCATGCACATGCGGCTCTACAGCATAGACTCGGCATA[C/A]AATCCATGGACCAGACTCACACTGAGCACGCAAAGCAGAGAGAATGAGTG
Long Flanking Sequence:
ATTGAAATGAGTTAATCTTACAAGCACCAAACTTTAACTTGTGGAAGTTTATGTACAGCAAAAAATGCAAGATACTTTAGCATTGTTCATCTCTTGGGTGTCATTCTTGAAAACGGTGGTCATTTTGCAGAATTCCTTTAGTTTTGTTTCCAGCAGCAGATCTGTCATTCCTCCTCAGACCGAGTGTTGTGATATGTGTGTGTAAAGTGTGTGTTGGTCTGCTGGTTTTGTGAGCTCAAGGGGGCAGCAGTGATCCATGACTCTCAGCCCTCTCCTAAAGACACCGCTCAGCATGTAAAAGGACACGAGCTCTGATATCTGTCATGTCCTCCTACACGCCTGGAGGCTTTACGCAAACTCCATTTATCATGTTTCACACTCTGACACTTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGTGTATGTGTTCTCTGTGTTTCAGATCAGCTGTTTCACGTGCTGGCCATGCACATGCGGCTCTACAGCATAGACTCGGCATA[C/A]AATCCATGGACCAGACTCACACTGAGCACGCAAAGCAGAGAGAATGAGTGAGTGCGCTCGCGCACACACACACACACACACCCACACTTGTACAGTTATCTTTGTATGGACATCATCAGACATTAATTTTATACTCTAGAGACTGTATGCAGGGTTTGAAATGAACCATTTTGCTTGGTAGCACCGGTGCTCCCAACTTTAAAAATGTAGGCGCACCAGTCAAAATTTAGTCACACTCACCAATTATAAGCACCGTTACTACAAGTTTTATACAAACATATTCATTGCATTTGAAATCAACAGTAATCAAACTAACAAGCAAAATATATATGCAAGCGTGAGGAAAATATGTCTCAACGAAATCCCGTTATCACAAGAAAATAGATTTTTATAACATAACTGAGTGACCAAAGCATACACGGAGCGCTCACCGGCCCTGCACACACTGCTTGACATGAATGAATCTGTTAACGATATAACTGTGCTGTTCTCACGGGTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34547
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047723 | None | None | 288 | None | 6 |
ENSDART00000062336 | Nonsense | 238 | 607 | 6 | 14 |
ENSDART00000129091 | Nonsense | 585 | 954 | 11 | 20 |
ENSDART00000129693 | Nonsense | 238 | 607 | 6 | 15 |
The following transcripts of ENSDARG00000042508 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 3933105)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 3949484 |
GRCz11 | 9 | 3921013 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTCGGCATACAATCCATGGACCAGACTCACACTGAGCACGCAAAGCAGA[G/T]AGAATGAGTGAGTGCGCTCGCGCACACACACACACACACACCCACACTTG
Long Flanking Sequence:
GTGGAAGTTTATGTACAGCAAAAAATGCAAGATACTTTAGCATTGTTCATCTCTTGGGTGTCATTCTTGAAAACGGTGGTCATTTTGCAGAATTCCTTTAGTTTTGTTTCCAGCAGCAGATCTGTCATTCCTCCTCAGACCGAGTGTTGTGATATGTGTGTGTAAAGTGTGTGTTGGTCTGCTGGTTTTGTGAGCTCAAGGGGGCAGCAGTGATCCATGACTCTCAGCCCTCTCCTAAAGACACCGCTCAGCATGTAAAAGGACACGAGCTCTGATATCTGTCATGTCCTCCTACACGCCTGGAGGCTTTACGCAAACTCCATTTATCATGTTTCACACTCTGACACTTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGTGTATGTGTTCTCTGTGTTTCAGATCAGCTGTTTCACGTGCTGGCCATGCACATGCGGCTCTACAGCATAGACTCGGCATACAATCCATGGACCAGACTCACACTGAGCACGCAAAGCAGA[G/T]AGAATGAGTGAGTGCGCTCGCGCACACACACACACACACACCCACACTTGTACAGTTATCTTTGTATGGACATCATCAGACATTAATTTTATACTCTAGAGACTGTATGCAGGGTTTGAAATGAACCATTTTGCTTGGTAGCACCGGTGCTCCCAACTTTAAAAATGTAGGCGCACCAGTCAAAATTTAGTCACACTCACCAATTATAAGCACCGTTACTACAAGTTTTATACAAACATATTCATTGCATTTGAAATCAACAGTAATCAAACTAACAAGCAAAATATATATGCAAGCGTGAGGAAAATATGTCTCAACGAAATCCCGTTATCACAAGAAAATAGATTTTTATAACATAACTGAGTGACCAAAGCATACACGGAGCGCTCACCGGCCCTGCACACACTGCTTGACATGAATGAATCTGTTAACGATATAACTGTGCTGTTCTCACGGGTGCTGTCTGATATTGCACTGATGTGTTTGACATATACTGTACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10176
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047723 | None | None | 288 | None | 6 |
ENSDART00000062336 | Essential Splice Site | 274 | 607 | 7 | 14 |
ENSDART00000129091 | Essential Splice Site | 621 | 954 | 12 | 20 |
ENSDART00000129693 | Essential Splice Site | 274 | 607 | 7 | 15 |
The following transcripts of ENSDARG00000042508 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 3928048)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 3944427 |
GRCz11 | 9 | 3915956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCCTCCTAATCATCTTCATCCTCACCATGCCTCAGCCTTTACGCAAAGG[T/C]ACACACACACTMACTCAMAGAGAGAAAATATTCAAACTTTAATTTTACGA
Long Flanking Sequence:
TTGTCCTTGGATGGTAAAATGGGCTGCCTAAAAACAAAGTGGAAATTATACAATGAACAAAGCAACTATAAAAGAGAATTAAGATAGATGTAGGTGTACAAATCTTGATAAATTATATAGAGCAGTGTTTCTCAACCACATTCCTGAAGGACCACCAGCTCTGCTCATTTTTCACGTCTCAAACGAACACACCTGATTCAGAGCATCAGCTCATTAGCAGAGACTGAAAGACCTGTAATGAGTGCGACAAAGGAGACATCCAAAACATGCAATGCTGGTGGTCCTCCAGGTATCATGGTTGAGAAACACAGATATAGTTTATACAGATAAAACAGTTGTTTGGTGATTGATTTGTGTGTCTGCAGTGTTTCATTGTTTGTTTGTTTTTGTGTGCGCAGGTACTGTGATGAAGAGCGTCCTGAGGTTCCCATGCTTTTCCGAGACGTCCCATCCCTCCTAATCATCTTCATCCTCACCATGCCTCAGCCTTTACGCAAAGG[T/C]ACACACACACTCACTCACAGAGAGAAAATATTCAAACTTTAATTTTACGAACACTTTTTGTCATGCTTGGGGTGTTTAAATGTAATTAAGAGATTTTTGTATATTATGTCATAGTGAAAATGTATTTTCTTCTTGTTTTGAATCATTTAATTAAAGCTGCACAATTCTGGAAAAAAAAACGAGAATCGCGTAACGAGATTCATTAACAAATGAATCGCTCCCTCCGTTACAATTAGAAGTAAAAACAGGAGAGGTGCTTTATTTCAGGACATGGATTAGATCAAATTTTACAGGTAGGCAGGATGATACATTTCCATGCACACAAACACACGCTTTTTTTTTTAGACATGTCCCTGCGGTCACTTGTCTATCAATGTATAAAAGTGATGTAAGATTATAGTTTTAAATTTAATAAATAAAATTTAAATAAAAAAATATTTGCAAAACTCCAGATCATATAAATTTTGGTCCCACATTCATTTCAAAGTAGCGCTACCCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2488
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047723 | None | None | 288 | None | 6 |
ENSDART00000062336 | Nonsense | 422 | 607 | 11 | 14 |
ENSDART00000129091 | Nonsense | 769 | 954 | 16 | 20 |
ENSDART00000129693 | Nonsense | 422 | 607 | 11 | 15 |
The following transcripts of ENSDARG00000042508 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 3918079)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 3934458 |
GRCz11 | 9 | 3905987 |
KASP Assay ID:
554-2681.1 (used for ordering genotyping assays)
KASP Sequence:
GGTTTAGCTGCTTCTGTTCAGKGCAGTGGATCCATGAGCAGCGCAGCGTG[T/A]CTGGAGTGGAACATCRGTGCTTTTGACTTGATCAGTCAGTGGTGCTCAGA
Long Flanking Sequence:
ACACTTTCAAACGACACCACTTACGGGGGTCTGGTGCAATGCTAGCCCTTTAAATCTGAAAGCGAAAGTCGATGACGTCACGGACCCGGTACCGGGTCCGCAGAGTTTAAGTGGTTAACCTGTTAAGCCTTTAAATGTCACTTTAAGCTGAGTACTAGTATCTATCAGGTCAAATAGTATGTTCTGTCATCATGGCAAAAATAAAATAAACCATTTATTGAAAATTAGTTATTAAAACTATTATGAAGGTATATAAGGTGAATGTATATACTACTGTTAATCCTATAGAAAATATTGAAATCTGGGCTGTACTTGCTGTATGTATATATAGATTTACAGCACGCTTTAAATGTATTGTTGAAATGAAGGTGATTCAATAATGGATGTTGTTTGCTTCTCTCTGCTTCATGACAGGTGGAGGAGGAGTTCTCTCTGCTGACGCGCTGTCTGGGTTTAGCTGCTTCTGTTCAGTGCAGTGGATCCATGAGCAGCGCAGCGTG[T/A]CTGGAGTGGAACATCAGTGCTTTTGACTTGATCAGTCAGTGGTGCTCAGAAGTCGTCGCTCTGTCCGACACGCCCTCCCAGCAGTCTGCGGTCAGTATCTGCTGCTCCTCCTAGAGCGAGAGCCCATAAATATAACGCATTAATGTTTAATATAATATAATATTGATGAAATATTTGAAAAAATATTCTTAAGATATTTGAAAAGGCTTTACAAAAAAAAGGACTTGATTTAACAATGTTAAGGCCTGTGCACACTGAGACGTTTTTGCCTTGTGTTTTACCTCGACGTTTAACGCCTCGTGACTAAACAAAGAGCGTCAATGTGATCGTGCCTTTAAAAAAAAAAAATGCTTCATGCACGGTTTTGTTTTGACGCGCCGTGTTAAATCTTCTCCATCAATCAGATCGGCACTTTTGTTCACGTGCACGGAGCTGCTGAAGTAACAGTAAACAGCACTTGGAGGCGCTCAAGCGCATAATTGTCAATGCGAGCGCACATT
Associated Phenotype:
Not determined