ZMP
ncapd3
Ensembl ID:
ZFIN ID:
Description:
condensin-2 complex subunit D3 [Source:RefSeq peptide;Acc:NP_956624]
Human Orthologue:
NCAPD3
Human Description:
non-SMC condensin II complex, subunit D3 [Source:HGNC Symbol;Acc:28952]
Mouse Orthologue:
Ncapd3
Mouse Description:
non-SMC condensin II complex, subunit D3 Gene [Source:MGI Symbol;Acc:MGI:2142989]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16819 | Essential Splice Site | Available for shipment | Available now |
| sa11112 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16819
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000049572 | Essential Splice Site | 288 | 1419 | 7 | 35 |
The following transcripts of ENSDARG00000034773 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 20341983)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 20866394 |
| GRCz11 | 1 | 21559331 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCATGGACTGGGGTTGCTTTGCTCTACTGTTCATGGTGAAGGYGATGAG[G/T]TGGGTAAAGTTACTCCAAAAAGATCTYYATGTTTTGGTTGCATATATATC
Long Flanking Sequence:
AGTTCTTTGTGTATATTAGTCTTAGCAGAAAATGTTTTTCAGATGTTTTATTATTTTTATTGCTGACATATTACTGTTTTAATTTTTCAGCTTTTCACTGAACTTACAAACTTTGAACCAGTCATTGGAGATTTGTCATTCTCTCAGGAAAGGTAAATGAAAAGATGAGCAAAGGCATTTGTGCTGACATATACTTAAAAGCTATTATTGATATTCTGAATCATCTTTTTGTCCATTATTTTTGTTGAATACATTTTTATATACATTTTACTACAATAATTATTGATTTAGTCCAAAAATAATTTTAAAAACTTTGTTTTTTGCAAACGTCTCCAGAGTAAATGTTTCTGATTTTACATAAAGCATTGTTGCTGACTGAGTTAGTTTTTTTTTCATTCTTCTCTCCTCAAAGGAATGTTGACCAATTACAGAGTCTCCCTGAGCTGTCCTATCATGGACTGGGGTTGCTTTGCTCTACTGTTCATGGTGAAGGCGATGAG[G/T]TGGGTAAAGTTACTCCAAAAAGATCTCCATGTTTTGGTTGCATATATATCTTGTATTGCTTGATCATTGTGGCTGCATTTTACAGTGCCGTCGCAGAGTGTTTCGCAAGCTACTTTATGTGATTCTAATGATGAAAACACAAGAGAGGTCCAGGCCAAGTCTTCTTGCTCCATCTCAGGCTGTCTGTGGTGCAAGAGACCAGGCCATTCTTTTCATTAGGTTCGTAACTGCTTAACATTTTTGTTTTGATGGGATTAAGAATTTTTGGGTTTGTTTTTAAATCAGTCAGAATTCATTTCATGTGTGTTACCTCTCTGAATTACATGTGTTCTTTGTTGTAGTCATATTGTTGATGAGCAGAGAGAGGCCACATTGCCACTTTTACGGATTCTTGTGCAACACATTTGTCATCAGGTATATTTATTTTAATGTAATATTTGAATCTAAAAAAAATGCTTTTTTTGTTGTATTAGTTCTGTCATTATTGACTCAACGCTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11112
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000049572 | Nonsense | 881 | 1419 | 21 | 35 |
The following transcripts of ENSDARG00000034773 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 20332804)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 20857215 |
| GRCz11 | 1 | 21550152 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAAAGTGGGGAAGAGAATTTTCCTTCTGGTTCAGTCTATTCTAACACCCT[T/A]AGAGCATCCAGGTGAGTCAAWTCAACTTTTTACTGCTTCWGGATCTGTGC
Long Flanking Sequence:
ACAAACCATTAACTAAGACTTATCTCAATAAACTGATAATTAGCTGCTTATTAATAGTAAGGTAGTAGTTTGGTTTACATTGTGGGTAGAATTAGGGATGTAAAATAAGATCATACTTTATAGCTACTAATATACAGTTAATATCTTAATAAAAGGCAGGTACTGTAATAAGCGTTATTAATAAGCAGATTGAAGCATGTATTTAATTATAAGACACTTTTTTTTATGCAATTAATGCTATACAATTAACACACCGATTATACAATTAATGCTCAGAATGCTCCATCTAGTTTCTGAACTTTAGATTGCCTGCATTAAGCTCAATTGCTGTCAAATATGCATTAAAGAGATCTAATAAATATTTAATTATTAATCTTTTATCCATTTATCTTATCTGTGTCAGGTCAAACATCTTTATACACTTGGCGTCGCTTCTCTCCATTGCCCTTCAAAAGTGGGGAAGAGAATTTTCCTTCTGGTTCAGTCTATTCTAACACCCT[T/A]AGAGCATCCAGGTGAGTCAATTCAACTTTTTACTGCTTCTGGATCTGTGCTTGTTAAATTAAGGTTCCTGGATTGATCATTTAAAAATTCTGTCTTATGGTTTTTTTTATCTCTTCTTCCAGTTTCTGCTGAAGGAGATGGCCTGCCCGCTAGTCAGCCTCTATCTCAGTTCAAACCCACTTCCATGCCGACAGTGGTCAGGGCACATGCTGTCATCACATTAGGTGTGAACTTTTATAAAAAACAAATTTTTTAAGAAAACACACATAATTCTTCAATGTGACAGCGGATGTTTCGAGTTTGATCTGACACTTTTTGTCTCTCATAGGAAAACTGTGTCTGCAGCATGAGGATCTGATGATGAAGTATCTCCCTGTGTTTGCCCGTGAGCTGGAAGTGGGCACAGAGCTGGCCGTGCGCAGTAATGTGGTGGTGGTGATGTGTGATCTTTGCGTTCGCTACACCAATACAGTGACTCGGTACATCCCAAACATCTCAGC
Associated Phenotype:
Not determined